Query= MSMg01no518_i22.b1 MSMg01no518_i22.b1 CHROMAT_FILE:
MSMg01no518_i22.b1 PHD_FILE: MSMg01no518_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:59 2005
(628 letters)
>mm_chr16_40218449_40219476
Length = 1028
Score = 1172 bits (606), Expect = 0.0
Identities = 618/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 7 gaattcagagtatcattcagcacacaggaacctaatgagatttttttttaattaacttat 66
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagagtagcagtcagcacacaggaacctaatgagatttttttttaattaacttat 266
Query: 67 ttcttattatatattttcttcatctacatttcaaatgctattcccaaagctccctatact 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttcttattatatattttcttcatctacatttcaaatgctattcccaaagctccctatact 326
Query: 127 ctccctgccccctgctctccaacccacccactcctgcttcctgcgagacagggtttctct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctccctgccccctgctctccaacccacccactcctgcttcctgcgagacagggtttctct 386
Query: 187 gtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaaa 446
Query: 247 tccgcctgcctctgcctcccaagtgctgggattaaaggcatgcgccaccactacctggtg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tccgcctgcctctgcctcccaagtgctgggattaaaggcatgcgccaccactacctggtg 506
Query: 307 agatgtttttgttatacatttttataacaaaaaatacatatttcgatgtgtaaattctga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agatgtttttgttatacatttttataacaaaaaatacatatttcgatgtgtaaattctga 566
Query: 367 caagaagggtttttttttccacaattcacctttaaaagttgcttagccagtatgacttcc 426
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caagaaggggttttttttccacaattcacctttaaaagttgcttagccagtatgacttcc 626
Query: 427 aaaatcactcctattttttttaaattattccttccattcgtttatatcttaaatgatatc 486
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaaatcactcctattttttttaa-ttattccttccattcgtttatatcttaaatgatatc 685
Query: 487 ccctcccttcccagttacccaaccacacccacatctgccctttcccccatcccctttgtt 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccctcccttcccagttacccaaccacacccacatctgccctttcccccatcccctttgtt 745
Query: 547 tctatgagggtcccccctcccacccactccagtcccaccgctccagcatccccctacact 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tctatgagggtcccccctcccacccactccagtcccaccgctccagcatccccctacact 805
Query: 607 ggggcatcaaacctctacagga 628
||||||||||||||||||||||
Sbjct: 806 ggggcatcaaacctctacagga 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_i22.g1 MSMg01no518_i22.g1 CHROMAT_FILE:
MSMg01no518_i22.g1 PHD_FILE: MSMg01no518_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:59 2005
(599 letters)
>mm_chr16_40361150_40362148
Length = 999
Score = 1143 bits (591), Expect = 0.0
Identities = 597/599 (99%)
Strand = Plus / Minus
Query: 1 acttcttttggttagcatttcattactggttttatgtggaatctgatttgacttaagcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acttcttttggttagcatttcattactggttttatgtggaatctgatttgacttaagcga 592
Query: 61 agatccttggaaccaagatgtttgcctttcctagaaagcattttttccctagtataaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agatccttggaaccaagatgtttgcctttcctagaaagcattttttccctagtataaagg 532
Query: 121 acactctcctagtgataactcagatgtccagagcatttattctctgtaagcacttcacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acactctcctagtgataactcagatgtccagagcatttattctctgtaagcacttcacta 472
Query: 181 tcacccacgtaggattctttagttttgtatctattttaatactttgagtcacagagctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tcacccacgtaggattctttagttttgtatctattttaatactttgagtcacagagctga 412
Query: 241 attaactttcttgaatttttaattttagttactttgacccaattatatgccctaataaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attaactttcttgaatttttaattttagttactttgacccaattatatgccctaataaat 352
Query: 301 aacttgatgttttaatttttaaaaagtaatcatttctaatatgtttttattgaaacagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aacttgatgttttaatttttaaaaagtaatcatttctaatatgtttttattgaaacagaa 292
Query: 361 tcctaccactcttcctttcctttttctctgtccagtccattttcagctaccctcccttga 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcctaccgctcttcctttcctttttctctgtccagtccattttcagctaccctcccttga 232
Query: 421 accactcccatgctcccttgctgtcacattgtgtggggctgtgctctgcccagccactgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 accactcccatgctcccttgctgtcacattgtgtggggctgtgctctgcccagccactgg 172
Query: 481 ggtgtgggacatgcttctggggaggaaaaatgtggggagtgtctgactatgtctccttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ggtgtgggacatgcttctggggaggaaaaatgtggggagtgtctgactatgtctccttga 112
Query: 541 gtgttcggctttagggaagcatcaaaacactactcagggtggtaggaatacagactaag 599
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 111 gtgttcggctttagggaagcatcaaaacactactcagggcggtaggaatacagactaag 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
