Query= MSMg01no519_c01.b1 MSMg01no519_c01.b1 CHROMAT_FILE:
MSMg01no519_c01.b1 PHD_FILE: MSMg01no519_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:45 2005
(688 letters)
>mm_chr16_46246689_46247771
Length = 1083
Score = 1239 bits (641), Expect = 0.0
Identities = 671/683 (98%), Gaps = 5/683 (0%)
Strand = Plus / Plus
Query: 6 gaattctaacagttcccactggtctagtcttccaaatatttctagggtatgtcttttcat 65
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctaacagcacccactggtctagtcttccaaatatttctagggtatgtcttttcat 265
Query: 66 ttcagttttcaagcaaactcagaatggatgagtccagacaagacaaattacaatgtcttt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcagttttcaagcaaactcagaatggatgagtccagacaagacaaattacaatgtcttt 325
Query: 126 tggtgagattatacagttggtgtgtgattgtaaaaaaaacatagttagtgatttagctaa 185
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 326 tggtgagattatacagttggtgtgtgattgtaaaaaaa-catagt----gatttagctaa 380
Query: 186 tatatcatggttgcctctgaccatagcaagatctattagcactcttaggagtcagaatac 245
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tatatcatggttgcctctgaccatagcaagatctattagcactcttaggaatcagaatac 440
Query: 246 tgtcatgtttgtggttatcacctataaatgcaagtagagttaagtgtagtagaatatgga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcatgtttgtggttatcacctataaatgcaagtagagttaagtgtagtagaatatgga 500
Query: 306 acaagtgtcccagtgtcctctccctgccatgtgatctagacctacctgatacagattctg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaagtgtcccagtgtcctctccctgccatgtgatctagacctacctgatacagattctg 560
Query: 366 ataacatatgtgaaatgttacagtactggggacacagacaggtgagtcagcacagttggt 425
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataacatatgtgaaatgttacagtactggggacacagacaggtgagtcagcacagttgga 620
Query: 426 ttttgatgggggctggcaacccatggtccctctactggacagaggcccaaatggcagaag 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttgatgggggctggcaacccatggtccctctactggacagaggcccaaatggcagaag 680
Query: 486 atacccaggcatctaaatctaggttgccagtctcccggcaatggccaactatggaaagcc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacccaggcatctaaatctaggttgccagtctcccggcaatggccaactatggaaagcc 740
Query: 546 tacagtactgacacttttctctaaaggtaaagtgtttaatgacttttctttacctgcttt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 tacagtactgacacttttctctaaaggtaaagtgtttaatgacttttctttacctccttt 800
Query: 606 gcaattttccttccttccttccttccttccttccttccttccttccttcctttcttcctt 665
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 801 gcaattttccttccttccttccttccttccttccttccttccttccttccttccttcctt 860
Query: 666 ctcattacacaactggacaccaa 688
||||||| |||||||||||||||
Sbjct: 861 ctcattaaacaactggacaccaa 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1083
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1073
Effective search space: 727494
Effective search space used: 727494
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_c01.g1 MSMg01no519_c01.g1 CHROMAT_FILE:
MSMg01no519_c01.g1 PHD_FILE: MSMg01no519_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:45 2005
(377 letters)
>mm_chr16_46412311_46413085
Length = 775
Score = 714 bits (369), Expect = 0.0
Identities = 375/377 (99%), Gaps = 2/377 (0%)
Strand = Plus / Minus
Query: 1 cagagtgaaatgctatactactctttctgagtccttgtattactgagtttctcagactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cagagtgaaatgctatactactctttctgagtccttgtattactgagtttctcagactcc 516
Query: 61 ccaaagcatggtttctgcaaactactccaagccattttcagtgaaaggtgacaatttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ccaaagcatggtttctgcaaactactccaagccattttcagtgaaaggtgacaatttttg 456
Query: 121 tagctttcagagcctctaacattgagcatgctcttttctntctctctactccaaacagct 180
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 455 tagctttcagagcctctaacattgagcatgctcttttct-tc-ctctactccaaacagct 398
Query: 181 tgcacacaaattccatgttctttgggggagggggtgcagagactgtccagagcaaaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tgcacacaaattccatgttctttgggggagggggtgcagagactgtccagagcaaaccat 338
Query: 241 tatgcccctagtactcaggcagagtgcattctctttgatgtgttgcccattctggtccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tatgcccctagtactcaggcagagtgcattctctttgatgtgttgcccattctggtccac 278
Query: 301 gatgcctttctccattaaggagcaaagttgatttctgaacctgactctgttccttgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gatgcctttctccattaaggagcaaagttgatttctgaacctgactctgttccttgtctt 218
Query: 361 cacattaacaggctccc 377
|||||||||||||||||
Sbjct: 217 cacattaacaggctccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 775
Length adjustment: 9
Effective length of query: 368
Effective length of database: 766
Effective search space: 281888
Effective search space used: 281888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
