Query= MSMg01no521_c06.b1 MSMg01no521_c06.b1 CHROMAT_FILE:
MSMg01no521_c06.b1 PHD_FILE: MSMg01no521_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:23 2005
(572 letters)
>mm_chr16_90189863_90190834
Length = 972
Score = 1027 bits (531), Expect = 0.0
Identities = 559/569 (98%), Gaps = 4/569 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatctgatgccaccttcaccatcttgcttggacactttatcctgtagaccaacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatctgatgccaccttcaccatcttgcttggacactttatcctgtagaccaacc 264
Query: 65 agaattgtgatcacgtaaggacagttctgcccatgggcaaagattaggaagggccacaga 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaattgtgatcacgcaaggacagttctgcccatgggcaaagattaggaagggccacaga 324
Query: 125 cgtgtgctctaattcctctgtctttgactaattgttaatattgcaagcatgggcaaatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgtgtgctctaattcctctgtctttgactaattgttaatattgcaagcatgggcaaatga 384
Query: 185 agaaatttaagagtgggtctggaaagaacccgagttccttgcaggcattctgttcctgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaatttaagagtgggtctggaaagaacccgagttccttgcaggcattctgttcctgtc 444
Query: 245 tccatctgccaggcgcatggggaacacaggcttcaaggtgagtctgtggaggaaatcagc 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tccatctgccaggcgcatggggaacacaggcttcaaggtgagtctgcggaggaaatcagc 504
Query: 305 taagaggatgcattcaaccaggacaggggcaacgtaggatgagctggactgagtgagagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taagaggatgcattcaaccaggacaggggcaacgtaggatgagctggactgagtgagagg 564
Query: 365 tcctggcttcaagctacccagagtgcttgtagtctaggaaatgtggccaggcggattccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcctggcttcaagctacccagagtgcttgtagtctaggaaatgtggccaggcggattccc 624
Query: 425 tcaaaggatcagtaaacgcctcatgtccagtcttccca-agctcactgtgattgagagct 483
||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 625 tcataggatcagtaaacgcctcatgtccagtcttcccaca-ctcactgtgattgagagct 683
Query: 484 gtgcagacttccacacattcattcattcccttctttatgtggttatgtatgtatgtatgt 543
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 gtgcagacttccacacattcattcattcccttctttatgtgattatgtatgtatgtatgt 743
Query: 544 gtgtgtgtgtgtgtgtgcatgtatgtatg 572
|| ||||||||| ||| |||||||||||
Sbjct: 744 gtatgtgtgtgtatgt--atgtatgtatg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_c06.g1 MSMg01no521_c06.g1 CHROMAT_FILE:
MSMg01no521_c06.g1 PHD_FILE: MSMg01no521_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:23 2005
(478 letters)
>mm_chr16_90361323_90362199
Length = 877
Score = 424 bits (219), Expect = e-123
Identities = 247/259 (95%), Gaps = 7/259 (2%)
Strand = Plus / Minus
Query: 218 ctgagccatctcgccagcccaagcccctctctttctaataagctactttgattttccaaa 277
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ctgagccatct---cagc---agcccctctctttctaataagctactttgattttccaaa 637
Query: 278 taatggcacgaaggcagaactcacacagtatgcacatatacttgtgaaaacacgatagtg 337
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 636 taatggcacgaaggcagaactcacacagtatgcacatacacttgtgaaaacacgatagtg 577
Query: 338 ttgctgtttaagggctctgcctttttttcttttaagaggacatttttttttcagcatttc 397
||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct: 576 ttgctgtttaagggctctgtcttttttt-tttcaagaggacatttttttttcagcatttc 518
Query: 398 agaaaggaaataacagaacaggcaaaactgggatttcaattgctgggaggagagagatgg 457
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 517 agaaaggaaataacagaacaggcaaaactggaatttcaattgctgggaggaaagagatgg 458
Query: 458 aaaaagaagagaaaaaaaa 476
|||||||||||||||||||
Sbjct: 457 aaaaagaagagaaaaaaaa 439
Score = 93.5 bits (48), Expect = 3e-23
Identities = 48/48 (100%)
Strand = Plus / Minus
Query: 1 aagtcctggctttaacagctgagccatctcagcagcccctctctttct 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 aagtcctggctttaacagctgagccatctcagcagcccctctctttct 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
