Query= MSMg01no521_h07.b1 MSMg01no521_h07.b1 CHROMAT_FILE:
MSMg01no521_h07.b1 PHD_FILE: MSMg01no521_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:48 2005
(550 letters)
>mm_chr16_95044061_95045011
Length = 951
Score = 982 bits (508), Expect = 0.0
Identities = 538/548 (98%), Gaps = 1/548 (0%)
Strand = Plus / Plus
Query: 4 gttaatagcacaaggttgaatctttctaacagggatatgggagatgtctcaaaaatttca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 gttaatagcacaaggttgaatctttctaacagggatatgggagatgtctcaaaaaattca 263
Query: 64 tggaacatttagaagtggaatacagaacagtgagcctccattctcagaggtagtttgccc 123
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggaacatttagaagtgggatgcagaacagtgagcctccattctcagaggtagtttgccc 323
Query: 124 tgtcctcagtggcctcagaagagccgggggtaatctacattcacggccaccgttggcagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtcctcagtggcctcagaagagccgggggtaatctacattcacggccaccgttggcagg 383
Query: 184 cattgtactgatgaatgttgctatttatgggactgcaggatcctttctggccggctccag 243
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 cattgtagtgatgaatgttgctatttatgggactgcagaatcctttctggccggctccag 443
Query: 244 tgttccttattatttcaaatatcatcagtttataattcacggtaggtgaccagggcagag 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 tgttccttattatttcaaatatcatcagtttataattcatggtaggtgaccagggcagag 503
Query: 304 gccaccttggcttgtggacgggcacacatcagtcaatatttttcacattgactcttcgga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 gccaccttggcttgtggacgggcacacatcagtcaatatttttcacattgactctttgga 563
Query: 364 gcaccttcaaaggggatcatctgacattctgtccaagcttcaaagttcctggaaacaatg 423
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 564 gcaccttcaaaggggatcatctgacattctgtccaagcttcaaagtccctggaaacaatg 623
Query: 424 gagcctcttgtgaggactggtctttccctctgcctccctacaaggctttgttctttattg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagcctcttgtgaggactggtctttccctctgcctccctacaaggctttgttctttattg 683
Query: 484 catttcaccct-tggcctatgagaaggaaataatctgccctggtttgagtctgtacctag 542
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 catttcaccctgtggcctatgagaaggaaataatcttccctggtttgagtctgtacctag 743
Query: 543 gaaggtca 550
||||||||
Sbjct: 744 gaaggtca 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space: 508140
Effective search space used: 508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_h07.g1 MSMg01no521_h07.g1 CHROMAT_FILE:
MSMg01no521_h07.g1 PHD_FILE: MSMg01no521_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:48 2005
(466 letters)
>mm_chr16_95212363_95213228
Length = 866
Score = 743 bits (384), Expect = 0.0
Identities = 384/384 (100%)
Strand = Plus / Minus
Query: 83 gtcaggtttgtttaagtagcttcaggatgtctggggctacatgatgagacccagtctaaa 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gtcaggtttgtttaagtagcttcaggatgtctggggctacatgatgagacccagtctaaa 807
Query: 143 ataagatgtaaagagaaaaacagcatagcaggtggataactagagacaatgaaataatct 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ataagatgtaaagagaaaaacagcatagcaggtggataactagagacaatgaaataatct 747
Query: 203 attatactagctgcagcaactttgtgccttagctttccaatctattcaatggaaataatg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 attatactagctgcagcaactttgtgccttagctttccaatctattcaatggaaataatg 687
Query: 263 aaaccaggagctccacaggatgtcaggaggaccagcctacagtacacacacaggaatgtc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaaccaggagctccacaggatgtcaggaggaccagcctacagtacacacacaggaatgtc 627
Query: 323 agcgggaccagcctacagtgcacacacagggatgtcagagggaccagcctacagtgcata 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agcgggaccagcctacagtgcacacacagggatgtcagagggaccagcctacagtgcata 567
Query: 383 gctctgagcaacacccagcaagccagaagcatattataagtagcaggcactgctgggtct 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gctctgagcaacacccagcaagccagaagcatattataagtagcaggcactgctgggtct 507
Query: 443 ttgtcctcagtgaggctgagtgtt 466
||||||||||||||||||||||||
Sbjct: 506 ttgtcctcagtgaggctgagtgtt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
