NNNNNNTTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCATAAATATTTATCAGTTTCCTATTGTGAGACAATA
GCCTTCCTTTCAATTGGGTTTATCTTATTCAATTATATATGAAAAGATGG
TGATAACATGTTTCTCCACATGCCACCATCTCACTGGTGAGGCCTTGACC
CTGAGCAACTCTTAATGCTGACACTTGCCGAATTCTTTTCAGTTCCTGTG
GCCTAGCTTCAAGATGCGGTCTATACAGAAAAAAATTGATTCACTCGCAC
TACCATATTTTAAGTTCTCATCTGGGGATTTCAGCAGTGTTGCTCTTACT
TACAACTTTGGAAAATATTGTGAGAATAATTTTTAATTTTTCACTATGGG
TATGCAGTTCATGCTATGGAGTCTAATTTTTGTAAGCCATATATTGCCTT
TGGCTGTCTGTATCCCACTGTCTTTTTCAAGAATTCTTCCTATCATCTTC
ATATATGCAGATATTTATACCCACTTGATTACTTCCATGCTGTAAAGAGG
TCATAGCTTGATATCATGGAAGTGTGAAGGGGTGGGATAGATGAGGGCTC
CTTGTTGTACCTGAGACACCCAGCCTTCATAATGGCTGGCCCAGAGTAGT
CTATTGTGTAAAACTAGTTAATATCATGAGAGTATGTATATAAACTTAAA
CTTCAACGAGTTTATGCGACTAGATGTT

NAAAANNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACT
TTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAA
CGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTA
CATTGATGGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAA
CCTACTTGGTCAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCTGTT
AGCGAGAATTTTATTAAGGATTTTTGCATCGATATTCATAAGAGAAATTG
GTCTGAAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGA
GTAATAGTGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTAT
CTTGTGAAATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCT
GATAGAACTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGG
AGACTATTAATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAG
AAGGTCAACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAA
ATTTGTCCATTTTGTCCAGGTTTTCCAGTTTTGTTGAGTATAAGCTTTTG
TAGAAGGATCTGATGGTGTTTT

Query= MSMg01no521_m02.b1 MSMg01no521_m02.b1 CHROMAT_FILE:
MSMg01no521_m02.b1 PHD_FILE: MSMg01no521_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:11 2005
         (647 letters)



>mm_chr16_71969005_71970051
          Length = 1047

 Score = 1236 bits (639), Expect = 0.0
 Identities = 642/643 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcataaatatttatcagtttcctattgtgagacaatagccttcctttcaattgggt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gaattcataaatatttatcagtttcctattgtgagacaatagccttcctttcaattgggt 788

                                                                       
Query: 65  ttatcttattcaattatatatgaaaagatggtgataacatgtttctccacatgccaccat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttatcttattcaattatatatgaaaagatggtgataacatgtttctccacatgccaccat 728

                                                                       
Query: 125 ctcactggtgaggccttgaccctgagcaactcttaatgctgacacttgccgaattctttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctcactggtgaggccttgaccctgagcaactcttaatgctgacacttgccgaattctttt 668

                                                                       
Query: 185 cagttcctgtggcctagcttcaagatgcggtctatacagaaaaaaattgattcactcgca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cagttcctgtggcctagcttcaagatgcggtctatacagaaaaaaattgattcactcgca 608

                                                                       
Query: 245 ctaccatattttaagttctcatctggggatttcagcagtgttgctcttacttacaacttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctaccatattttaagttctcatctggggatttcagcagtgttgctcttacttacaacttt 548

                                                                       
Query: 305 ggaaaatattgtgagaataatttttaatttttcactatgggtatgcagttcatgctatgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 547 ggaaaatattgtgagaataatttttaatttttcactatgggtatgcagtacatgctatgg 488

                                                                       
Query: 365 agtctaatttttgtaagccatatattgcctttggctgtctgtatcccactgtctttttca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agtctaatttttgtaagccatatattgcctttggctgtctgtatcccactgtctttttca 428

                                                                       
Query: 425 agaattcttcctatcatcttcatatatgcagatatttatacccacttgattacttccatg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agaattcttcctatcatcttcatatatgcagatatttatacccacttgattacttccatg 368

                                                                       
Query: 485 ctgtaaagaggtcatagcttgatatcatggaagtgtgaaggggtgggatagatgagggct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctgtaaagaggtcatagcttgatatcatggaagtgtgaaggggtgggatagatgagggct 308

                                                                       
Query: 545 ccttgttgtacctgagacacccagccttcataatggctggcccagagtagtctattgtgt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccttgttgtacctgagacacccagccttcataatggctggcccagagtagtctattgtgt 248

                                                      
Query: 605 aaaactagttaatatcatgagagtatgtatataaacttaaact 647
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaaactagttaatatcatgagagtatgtatataaacttaaact 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)