CAACAACNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCCTTGCTTAATCATCATAACAAACCAAACTAATTT
TTATTTTACATGACAAAATATAATTTAAAATTCTCTCTTAAGATCTACTA
TCTCTTCATTGGAAAGACCAAGATGGGCACTCTTACAATAAGATATGAAT
ATAGTCATTACAAGGAAAAGACGTAATGAACTCTGCCTGTGTAGTCCCAA
CAGCAATCAGATCCATGGACAGAGAATATAGAGAGTGTAACTGTGAATAA
GTTATGAGTTATTCCATTCTTTCAAGAGCAACAGGAATGAGGAAAATAAT
GGATTTTTCTCTACCTAATTTTTATTTTCAAATTTCTAAAAAGAATGTTT
ACAAAAGATTAAAATAATTGATGGCATGACTTTGCTGTAAGTGGTAAATG
TTACTTTATTTTGGGGTTCATTTTTTTTTGAGTTTCATAAAATAAGCAAT
AAATACACTGACTTTCTATTGCATGAAGAATGTTGTTAATGTCAATGTTA
CAAAGAAAGCTAGTAGGTTTCAAGATCAGAGCCTGTCAAGGACAATGCAT
TATATTACTTGGCATTTGGGAAATATTTATTTTCAACAAATGTCAATTTA
GGAAGTAAGGCTTCATTTTTCTCTTCATTATGAAAATATGATGAAAGCCA
TTTGCTCTTCAACATTTTTACTAAAN

CTCTAATTTCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAAAAAACCAG
AAACAGTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGATATG
GGCACAGGGGAAAAATTCCTAAATAGAACAGCAATGGGTTGTGCTGTAAG
GTTGAGAATTGACAAATGGGACCTCATAAAATTTCAAAGCTTCTGTGAGG
CAAAAGACACCGTCAATAAGACAAAAAGGCCACCAACAGTTTGGGAAAGG
ATCTTTACCTTTCCTAAATCAGATAGGGGACTAATATACAATATATATAT
ATATATATTGTATATTAGTCCCCTATCTGATTTATATATGTATTATATAT
ATATAAAGAACGCAAGGAGGGTGGACTCCACAAAATCAAGTAGCCCTATT
AAGAAATGGGGCTCAGAGACTATACGAGAATTCTCATGTGAGGAATACCG
AATGGGTGAAGAACATCGGAGATCATATTTAGGATTTTTAATCTGCGGGA
TATGCTTCGAGGCTTTTCCCTGATATCCCCTCTAAAGCTTCACTGATGCC
GGATATTTGAGGTATTCGGCGGATCCTATGATAGTGTGACCTAAATGACG
ACGGACAGGTGGTCGCCAGGCGTAGCCACTAGTCGATTCGGGAGGCTTTT
TGACGGCTCATACNGGCNGTTCCTCAGAGATTTGGA

Query= MSMg01no527_b05.b1 MSMg01no527_b05.b1 CHROMAT_FILE:
MSMg01no527_b05.b1 PHD_FILE: MSMg01no527_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:11 2005
         (670 letters)



>mm_chr16_75423486_75424557
          Length = 1072

 Score = 1255 bits (649), Expect = 0.0
 Identities = 662/667 (99%), Gaps = 2/667 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgcttaatcatcataacaaaccaaactaatttttattttacatgacaaaata 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gaattccttgcttaatcatcataacaaaccaaactaatttttattttacatgacaaaata 812

                                                                       
Query: 65  taatttaaaattctctcttaagatctactatctcttcattggaaagaccaagatgggcac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 811 taatttaaaattctctcttaagatctactatctcttcattggaaagaccaagatgggcat 752

                                                                       
Query: 125 tcttacaataagatatgaatatagtcattacaaggaaaagacgtaatgaactctgcctgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tcttacaataagatatgaatatagtcattacaaggaaaagacgtaatgaactctgcctgt 692

                                                                       
Query: 185 gtagtcccaacagcaatcagatccatggacagagaatatagagagtgtaactgtgaataa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gtagtcccaacagcaatcagatccatggacagagaatatagagagtgtaactgtgaataa 632

                                                                       
Query: 245 gttatgagttattccattctttcaagagcaacaggaatgaggaaaataatggatttttct 304
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gtcatgagttattccattctttcaagagcaacaggaatgaggaaaataatggatttttct 572

                                                                       
Query: 305 ctacctaatttttattttcaaatttctaaaaagaatgtttacaaaagattaaaataattg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctacctaatttttattttcaaatttctaaaaagaatgtttacaaaagattaaaataattg 512

                                                                       
Query: 365 atggcatgactttgctgtaagtggtaaatgttactttattttggggttcatt--tttttt 422
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||
Sbjct: 511 atggcatgactttgctgtaagtggtaaatgttactttattttgtggttcattattttttt 452

                                                                       
Query: 423 tgagtttcataaaataagcaataaatacactgactttctattgcatgaagaatgttgtta 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgagtttcataaaataagcaataaatacactgactttctattgcatgaagaatgttgtta 392

                                                                       
Query: 483 atgtcaatgttacaaagaaagctagtaggtttcaagatcagagcctgtcaaggacaatgc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atgtcaatgttacaaagaaagctagtaggtttcaagatcagagcctgtcaaggacaatgc 332

                                                                       
Query: 543 attatattacttggcatttgggaaatatttattttcaacaaatgtcaatttaggaagtaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 attatattacttggcatttgggaaatatttattttcaacaaatgtcaatttaggaagtaa 272

                                                                       
Query: 603 ggcttcatttttctcttcattatgaaaatatgatgaaagccatttgctcttcaacatttt 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggcttcatttttctcttcattatgaaaatatgatgaaagccatttgctcttcaacatttt 212

                  
Query: 663 tactaaa 669
           |||||||
Sbjct: 211 tactaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1072
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1062
Effective search space:   700920
Effective search space used:   700920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)