Query= MSMg01no529_b05.b1 MSMg01no529_b05.b1 CHROMAT_FILE:
MSMg01no529_b05.b1 PHD_FILE: MSMg01no529_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:53 2005
(642 letters)
>mm_chr16_40567834_40568873
Length = 1040
Score = 1098 bits (568), Expect = 0.0
Identities = 620/640 (96%), Gaps = 7/640 (1%)
Strand = Plus / Plus
Query: 5 gaattctctccaatatgagccaggctgagagattttccagcactgcctcccactcaatga 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattctctccaatatgagccaggctgagagattttccatcactgcctcccactcaatga 264
Query: 65 gaagtggagatgagcacgtccctatttgacatctaatttccccggggtatgcttcccaac 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaagtggagatgagcacatccctatttgacatctaatttccccggggtatgcttcccaac 324
Query: 125 ttgttagttgttctgtcaatctgtattcagttccttttatttagttttcttctttgtttg 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgttagttgttctgtcaatatgtattcagttccttttatttagttttcttctttgtttg 384
Query: 185 tttttatgtttcagcactttactaggctcattgcaaaaacagagaaacttaatgtacagt 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 tttttatgtttcagcacttttctaggctcattgcaaaaacagagaaacttaatgtgcagt 444
Query: 245 cattttccccaagttcgtaaaaagaagaatataaacaattgcttgataaccaaagtgtca 304
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 cattgtccccaagttcgtaaaaagaagaaggtaaacaattgcttgataaccaaagtgtca 504
Query: 305 gacattggattaaccattcaagtttagcggttcatgtcaattaatttataattcgtttat 364
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 505 gacattggattaaccattcaagtttagcggttcatgtcaatt----tataattcgttcat 560
Query: 365 gaggaagtgttttcacatgtggaaaacactactggatctgccatgaaggaaaacaaaaac 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaggaaatgttttcacatgtggaaaacactactggatctgccatgaaggaaaacaaaaac 620
Query: 425 aatctgttgtgtcatatgccagagaatgaagcacatttcattttcagtcaatgttggagc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatctgttgtgtcatatgccagagaatgaagcacatttcattttcagtcaatgttggagc 680
Query: 485 tatgggatcctgaagaccacagacctctgcatttctggctaccacttatacatgtacaat 544
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 tatgggatcctgaagatcacagacctctgcatttctggctaccacttacacatgtacaat 740
Query: 545 gtctgtatgttt--tttttctttttttttttaattttggtttttttcgagacagggtttc 602
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 gtctgtatgtttcttttttctttttttttt-aattttggtttttttcgagacagggtttc 799
Query: 603 tctatgtagccctgactgtcctggaactcactctgtagac 642
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 800 tctatgtagccctggctgtcctggaactcactctgtagac 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1040
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1030
Effective search space: 650960
Effective search space used: 650960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_b05.g1 MSMg01no529_b05.g1 CHROMAT_FILE:
MSMg01no529_b05.g1 PHD_FILE: MSMg01no529_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:53 2005
(641 letters)
>mm_chr16_40763476_40764516
Length = 1041
Score = 1176 bits (608), Expect = 0.0
Identities = 633/642 (98%), Gaps = 2/642 (0%)
Strand = Plus / Minus
Query: 1 taataagaggcttggcctttgcagggtctaaagcatgtgatattcagatgcatgacaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 taataagaggcttggcctttgcagggtctaaagcatgtgatattcagatgcatgacaaac 890
Query: 61 acaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaagcaaaac--gtgtttttcag 118
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 889 acaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaagcaaaacatgtgtttttcag 830
Query: 119 agtgctgacagtttgttgctgtttattgctacctgatcttataagacagcattgtgtctg 178
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 829 agtgctgacagtttgttgttgtttgctgctacctgatcttataagacagcattgtgtctg 770
Query: 179 ggttatggtttagtaaccgtggacctgtaatacagtattctggtttaagggtcaaaatca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ggttatggtttagtaaccgtggacctgtaatacagtattctggtttaagggtcaaaatca 710
Query: 239 gctggctttctagtacaattagacctttagagggtgggtgaacttgcatcatttttttgc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gctggctttctagtacaattagacctttagagggtgggtgaacttgcatcatttttttgc 650
Query: 299 aaatctggtcaccaactctgggtttctgtaggaatgccagtgctttgtcaatggtaatag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aaatctggtcaccaactctgggtttctgtaggaatgccagtgctttgtcaatggtaatag 590
Query: 359 catttcccttttgaactctgtacaatttctccatattaaggatgttggcaaaacttctag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 catttcccttttgaactctgtacaatttctccatattaaggatgttggcaaaacttctag 530
Query: 419 tttcattcttagtctttgttactctgtattttacaggactgtgtgtttttgacattcttt 478
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tttcattcttactctttgttactctgtattttacaggactgtgtgtttttgacattcttt 470
Query: 479 ccattcaaaacaatagtcatataacgaaattctctaacctcctattttgtaaccagaatt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ccattcaaaacaatagtcatataacgaaattctctaacctcctattttgtaaccagaatt 410
Query: 539 caatttatatcaaaagaatgaatcaaatatctctgatttgaataaaaaaatacctcttaa 598
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 caatttaaatcaaaagaatgaatcaaatatctctgatttgaataaaaaaatacctcttaa 350
Query: 599 aatgattttattctttccattgcttaaacacaaaggctggag 640
||||||||||||||||||||||||||||| || |||||||||
Sbjct: 349 aatgattttattctttccattgcttaaacccataggctggag 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
