Query= MSMg01no531_e18.b1 MSMg01no531_e18.b1 CHROMAT_FILE:
MSMg01no531_e18.b1 PHD_FILE: MSMg01no531_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:53 2005
(703 letters)
>mm_chr16_90757145_90758247
Length = 1103
Score = 901 bits (466), Expect = 0.0
Identities = 505/518 (97%), Gaps = 2/518 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaagcactgcgaggggtcgggcaggatgggcccatgctgcagtggacgattgg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattctcaagcactgggaggggtcgggcaggatgggcccatgctgcagtggacgattgg 458
Query: 65 agcagaagattccttgtcattcctgacgcagcagcactaccacgaggctctgcctgtgac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agcagaagattccttgtcattcctgacgcagcagcactaccacgaggctctgcctgtgac 398
Query: 125 agggcaagtgtatgcccaagagtcactgggtcttttagttcatttttcaaaagtcatttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agggcaagtgtatgcccaagagtcactgggtcttttagttcatttttcaaaagtcatttt 338
Query: 185 caactcttgagaagctaacccaaatacacaggcgcaatccctaaccccaggaactctgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 caactcttgagaagctaacccaaatacacaggcgcaatccctaaccccaggaactctgca 278
Query: 245 tatttaacagtcatgttttgctataatgctagatgacttcttaagggtgcccggacccat 304
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 277 tatttaacagtcatgttttgctacaatgctagatgacttcttaagggtgcctggacccat 218
Query: 305 cacaagaggtctgcggagccaggcgtggtggcga-acgcctttaatcccagcactcggga 363
||||||||||||| |||||||||||||||||| | || ||||||||||||||||| ||||
Sbjct: 217 cacaagaggtctgtggagccaggcgtggtggc-acacacctttaatcccagcactgggga 159
Query: 364 ggcagaggtaggcagatttctgagttcgaggccaggctggtctacaaagtgagttccagg 423
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggcagaggcaggcagatttctgagttcgaggccaggctggtctacaaagtgagttccagg 99
Query: 424 acagccagagctatacagagaaaccctgtctcaaaaaaccaaaaaaacccaaaaaccaaa 483
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 98 acagccagagctatacagagaaaccctgtctcgaaaaaccaaaaaaaatcaaaaaccaaa 39
Query: 484 aaaacaaagaggtctgtagcattgccatttcataaacc 521
||||| ||||||||||||||||||||||||||||||||
Sbjct: 38 aaaaccaagaggtctgtagcattgccatttcataaacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no531_e18.g1 MSMg01no531_e18.g1 CHROMAT_FILE:
MSMg01no531_e18.g1 PHD_FILE: MSMg01no531_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:53 2005
(581 letters)
>mm_chr16_90621895_90622877
Length = 983
Score = 1116 bits (577), Expect = 0.0
Identities = 581/583 (99%), Gaps = 2/583 (0%)
Strand = Plus / Plus
Query: 1 ctggcaagttggggctttgtccaggacctccttctctccagaggttgcctgcatgctgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggcaagttggggctttgtccaggacctccttctctccagaggttgcctgcatgctgca 260
Query: 61 gcctgcagcctgcagaaaagctatctagaagctccccactgaggggacgtcatccaacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgcagcctgcagaaaagctatctagaagctccccactgaggggacgtcatccaacgg 320
Query: 121 tcatttggctctgttttccctaagtcctcacagtggggactgacagtgttcactgttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttggctctgttttccctaagtcctcacagtggggactgacagtgttcactgttcat 380
Query: 181 attttactgaggaaaaaaaaa--gtgcccatcacctcactcccagaaaatcaaatgctgc 238
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttactgaggaaaaaaaaaaagtgcccatcacctcactcccagaaaatcaaatgctgc 440
Query: 239 tttccctgctggcggaacagcacgctctgacaatccccactgagcagagccagagtgatt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttccctgctggcggaacagcacgctctgacaatccccactgagcagagccagagtgatt 500
Query: 299 catgctcagtatttagacgaaagaccaacatatgctgggcacatgtgcggggagtcggcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgctcagtatttagacgaaagaccaacatatgctgggcacatgtgcggggagtcggcc 560
Query: 359 atgttgccaagctgcgtcctgagaacggcccactcaaaagaaagttccttatttcaccct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgttgccaagctgcgtcctgagaacggcccactcaaaagaaagttccttatttcaccct 620
Query: 419 ctgcccaaaacagaaactcatatcagttctgccacctaaatagagcagccgtaggccttg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgcccaaaacagaaactcatatcagttctgccacctaaatagagcagccgtaggccttg 680
Query: 479 gcattttggaaaggctgcttggaggcacgggacgctcctttgaaatcagaccacagaagg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcattttggaaaggctgcttggaggcacgggacgctcctttgaaatcagaccacagaagg 740
Query: 539 gcaagtaggatttatagaaactgaatgagccccattacctaag 581
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcaagtaggatttatagaaactgaatgagccccattacctaag 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 983
Length adjustment: 10
Effective length of query: 571
Effective length of database: 973
Effective search space: 555583
Effective search space used: 555583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|