NTTTAAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGG
ATCCGCGGAATTCACAAAGATTCCATGTTGGTTTGGGGTGATGCCTTTGT
GACTTCTATTTTTGTGATGAAACAACATGACCAAAAGCAACTTGGAGAGG
GAAGGGTTTATTTATCTTACAACTCTCAGGCCACTCTCCATCCCTGAGGT
AAGTCAGAGGAAGGACTCCAGGCAGGAACCAAAGCAGAGGCCACAGAGGA
AGGCTTCTTTTTAACTTGCTCCCCGGGACTTGTAGCCTCGTTTCTTATAG
TACCCGTGCCCCACCCACAATGAACTGAGATCTCCCCCACTATTCTTTAA
TCAAGAAAATGTGTATGGTTTTGTTCACAGGCCAGTCTTGTGGGAGCATT
TCTCAACTAAGGTTTCCTTTTCTCAAATGATGCTAACTTGTATCAAGCTG
ACAAGATAATTAATAATAATAATAATAATAATAATAATAATAATAATTAA
CAACAACCAGTGCAGCAGGACGCTATCAAAATCTTTACATTTTGCACCTG
CACGGAACATCTTATCAACCAAGTGCTGAGCAAGGTTACTAGGATGACAC
CTTGTTAGTTCGTGTTCTAAGCTAGCTCAGGAGCCCATTGGATAAATTGG
AGGTCATCATACACAGAGTACATATACAGATGAATCATATATAGACCAGT
GCAAAGGTGAATCTCCTAGCAGCCCTGGAGAAGTAT

NAGTTTAACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCT
ACCATCATCATGAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGT
GTTAGGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATG
GTGAGTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCC
ATCTGGCAATCTCTGGAGTTTGTTGTTATAGTTGTCTTTGTTAAGAGATT
GTTCCTCTGTTGATTTTGTTACCCTCTATCAGCAGGCGTGGGAGACAAGC
TCTCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTC
CTCTCTCAGGGAAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGC
TGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTG
GCCAGCAAGGTGGCCAGTTGTCTGGAGTCGAAGATGTCGCCGCCTCAGAA
GCTCTGTGGCTCTTGCCGGGAAGGTGGCCGGCTGTCTGGAGCTGAAGATG
GCGCCGCCCCAGAATCTCTGCGACTCTCTCGCCCGTCCCAGAAACGGCTG
GCACTCTGTATTCCACACGGTCACCCGTGCAGCCTGCCCTCCGCGGAGTC
CCGGAGCCAAGAAGGCTCCCGCCGGCGCCTGTGCCACAAAC

Query= MSMg01no532_e17.b1 MSMg01no532_e17.b1 CHROMAT_FILE:
MSMg01no532_e17.b1 PHD_FILE: MSMg01no532_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:11 2005
         (627 letters)



>mm_chr16_91273334_91274360
          Length = 1027

 Score = 1135 bits (587), Expect = 0.0
 Identities = 613/627 (97%), Gaps = 9/627 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttggtttggggtgatgcctttgtgacttctatttttgtgatgaaacaacatgaccaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 210 tgttggtttggggtgatgcctttgtgacttctatttttgtgatgaaacaccatgaccaaa 269

                                                                       
Query: 61  agcaacttggagagggaagggtttatttatcttacaactctcaggccactctccatccct 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 270 agcaacttggggagggaagggtttatttatcttacaactctcaggccactctccatcact 329

                                                                       
Query: 121 gaggtaagtcagaggaaggactccaggcaggaaccaaagcagaggccacagaggaaggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaggtaagtcagaggaaggactccaggcaggaaccaaagcagaggccacagaggaaggct 389

                                                                       
Query: 181 tctttttaacttgctccccgggacttgtagcctcgtttcttatagtacccgtgccccacc 240
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 390 cctttttaacttgctccccgggacttgtagcctcgtttcttatactacccgtgccccacc 449

                                                                       
Query: 241 cacaatgaactgagatctcccccactattctttaatcaagaaaatgtgtatggttttgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cacaatgaactgagatctcccccactattctttaatcaagaaaatgtgtatggttttgtt 509

                                                                       
Query: 301 cacaggccagtcttgtgggagcatttctcaactaaggtttccttttctcaaatgatgcta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cacaggccagtcttgtgggagcatttctcaactaaggtttccttttctcaaatgatgcta 569

                                                                       
Query: 361 acttgtatcaagctgacaagataattaataataataataataataataataataataata 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct: 570 acttgtatcaagctgacaagataattaataataataataataataataataat------- 622

                                                                       
Query: 421 attaacaacaaccagtgcagcaggacgctatcaaaatctttacattttgcacctgcacgg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 --taacaacaaccagtgcagcaggacgctatcaaaatctttacattttgcacctgcacgg 680

                                                                       
Query: 481 aacatcttatcaaccaagtgctgagcaaggttactaggatgacaccttgttagttcgtgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacatcttatcaaccaagtgctgagcaaggttactaggatgacaccttgttagttcgtgt 740

                                                                       
Query: 541 tctaagctagctcaggagcccattggataaattggaggtcatcatacacagagtacatat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctaagctagctcaggagcccattggataaattggaggtcatcatacacagagtacatat 800

                                      
Query: 601 acagatgaatcatatatagaccagtgc 627
           |||||||||||||||||||||||||||
Sbjct: 801 acagatgaatcatatatagaccagtgc 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)