Query= MSMg01no533_d10.b1 MSMg01no533_d10.b1 CHROMAT_FILE:
MSMg01no533_d10.b1 PHD_FILE: MSMg01no533_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:22 2005
(569 letters)
>mm_chr16_90757472_90758442
Length = 971
Score = 1035 bits (535), Expect = 0.0
Identities = 562/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 1 gctgggcatttccacaagccatctagaactataagctcagatgacgggggctaagtcggt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gctgggcatttccacaagccatctagaactataagctcagacgacgggggctaagtcggt 260
Query: 61 atatgaagctgatcccagtggagggtgtgacataaaacacacagaaaggccagtgggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatgaagctgatcccagtggagggtgtgacataaaacacacagaaaggccagtgggatt 320
Query: 121 gcagctgcactttgatccgaagcagaccagacactgaatatcaggagttaatcaaagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagctgcactttgatccgaagcagaccagacactgaatatcaggagttaatcaaagaaa 380
Query: 181 gaccatttggccatttccagaagctagactctaagtttacaagagtgtgaggggacacta 240
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 381 gaccatttggccatttccagaagctagactgtaagttcacaagagtgtgaggggacacta 440
Query: 241 ctgcacacagtctatctattcatacttaaacttttagaggtctcataagcagacagctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgcacacagtctatctattcatacttaaacttttagaggtctcataagcagacagctca 500
Query: 301 tctagaaggcacttacctgctctcaaggatgtgtaaaagccacgttaaaaggctatagtc 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 tctagaaggcacttacctgctctcaaggatgtgtaaaacccacgttaaaaggctatagtc 560
Query: 361 acgtatgacgtcataggcagatctggtgatgtgggcaacattctgcaggatttccagaat 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgtatgacttcataggcagatctggtgatgtgggcaacattctgcaggatttccagaat 620
Query: 421 ccaattctgaaa-gcccaacagttagtcacttcttagtagaaaaacaaacgtatttgacc 479
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ccaattctgaaaagcccaacagttagtcacttcttagtagaaaaacaaacttatttgacc 680
Query: 480 aaaatggattttccctcccactctactttaacttttaatattttt-agacagggacttac 538
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 aaaattgattttccctcccactctactttaacttttaatattttttagacagggacttac 740
Query: 539 aatggtcctagacttttgaggtctgggacca 569
|||||||||||||||||||||||||||||||
Sbjct: 741 aatggtcctagacttttgaggtctgggacca 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 971
Length adjustment: 10
Effective length of query: 559
Effective length of database: 961
Effective search space: 537199
Effective search space used: 537199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_d10.g1 MSMg01no533_d10.g1 CHROMAT_FILE:
MSMg01no533_d10.g1 PHD_FILE: MSMg01no533_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:22 2005
(636 letters)
>mm_chr16_90924804_90925839
Length = 1036
Score = 1131 bits (585), Expect = 0.0
Identities = 603/609 (99%)
Strand = Plus / Minus
Query: 26 agggcaatggttctcagcccagggtttacccaccctttcacgggtgttgcataccaaatg 85
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1036 agggcaatggttctcagcccagggttgacccaccctttcacgggtgttgcataccaaatg 977
Query: 86 tcctgcatgtcagacatttacattacgattcatgacagaaaaattacagttatgaggtag 145
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 976 tcctgcatgtcagacatttacattacgattcatgacagaaaaatgacagttatgaggtag 917
Query: 146 caatgaaataatgttatggttggggtcaccagaacatgaggagctgtgttaaagggtcac 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 caatgaaataatgttatggttggggtcaccagaacatgaggagctgtgttaaagggtcac 857
Query: 206 agcattaggaagggtgggaaccctgcactcggtggacccactgtcatatctgactgtgct 265
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 agcatcaggaagggtgggaaccctgcactcggtggacccactgtcatatctgactgtgct 797
Query: 266 agccctcaagggtaagcttggctctgggctaccccctggccttatctgccaggagaagcc 325
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 796 agccctcaagggtaagcttggctccgggctaccccctggccttatctgccaggagaagcc 737
Query: 326 acccgtggttcaggttggtagccaactaggctaacctggcaccttgacccttcttcagtt 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 acccgtggttcaggttggtagccaactaggctaacctggcaccttgacccttcttcagtt 677
Query: 386 aaccattcaagtctccttcactaaacaggctgggaaaaggcgttgtgacactggcacaga 445
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 676 aaccattcaagtctccttcactaaacaggctgggaaaaggcgttgtgacgctggcacaga 617
Query: 446 gtggctgtgcttggggatggccacaccaactgcaggctcagctgcctgctgtccctgggt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtggctgtgcttggggatggccacaccaactgcaggctcagctgcctgctgtccctgggt 557
Query: 506 tgtgctgtacaccatcaggctaatgacaacaggtttgtgcgcctgtgaccacctgcagga 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgtgctgtacaccatcaggctaatgacaacaggtttgtgcgcctgtgaccacctgcagga 497
Query: 566 catactagggcactgggcctttttaaagtcactattccccctaagccactgtaaccccca 625
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 catactggggcactgggcctttttaaagtcactattccccctaagccactgtaaccccca 437
Query: 626 acacctagc 634
|||||||||
Sbjct: 436 acacctagc 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
