Query= MSMg01no534_h21.b1 MSMg01no534_h21.b1 CHROMAT_FILE:
MSMg01no534_h21.b1 PHD_FILE: MSMg01no534_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:02 2005
(293 letters)
>mm_chr16_5209386_5210078
Length = 693
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 5 gaattctctacctcgaaggttctggggtcaagttcagatcactaggcaagtgtctttacc 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctctaccaggaaggttctggggtcaagttcagatcactaggcaagtgtctttacc 265
Query: 65 ctgtaagtcatcctgtcagatacatctgtttgtttttgagacaaggtctagctgatagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgtaagtcatcctgtcagatacatctgtttgtttttgagacaaggtctagctgatagga 325
Query: 125 actcacagagatcagcctgcctctgcctcccaagtgctgggactacaggcatgagccgtc 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 actcacagagatcagcctgcctctgcctcccaagtgctgggacta-aggcatgagccgtc 384
Query: 185 ctgcccctcccacatctggtttatatttttaatggttgaaattggattgtcaggtttgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgcccctcccacatctggtttatatttttaatggttgaaattggattgtcaggtttgca 444
Query: 245 tggctggttcttttctggcagtttgagacagcatctcatgtagtac 290
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 tggctggttcttctctggcagtttgagacagcatctcatgtagtac 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no534_h21.g1 MSMg01no534_h21.g1 CHROMAT_FILE:
MSMg01no534_h21.g1 PHD_FILE: MSMg01no534_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:02 2005
(148 letters)
>mm_chr16_5334465_5335012
Length = 548
Score = 257 bits (133), Expect = 2e-73
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 12 ctctgtgttagctgggaccctcctctgggtaccgccctcatcctccagctctctgatgaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctctgtgttagctgggaccctcctctgggtaccgccctcatcctccagctctctgatgaa 285
Query: 72 ttctcccaaagagatgttattttctccgtgactctagctgctggttatgattcatgtgtg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttctcccaaagagatgttattttctccgtgactctagctgctggttatgattcatgtgtg 225
Query: 132 tgtttaagagttt 144
|||||||||||||
Sbjct: 224 tgtttaagagttt 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 548
Length adjustment: 8
Effective length of query: 140
Effective length of database: 540
Effective search space: 75600
Effective search space used: 75600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
