Query= MSMg01no535_c22.b1 MSMg01no535_c22.b1 CHROMAT_FILE:
MSMg01no535_c22.b1 PHD_FILE: MSMg01no535_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:55 2005
(694 letters)
>mm_chr16_89819543_89820632
Length = 1090
Score = 549 bits (284), Expect = e-160
Identities = 314/326 (96%), Gaps = 6/326 (1%)
Strand = Plus / Minus
Query: 4 gaattcattcatttttacgtgtatgctgctgtaacctggaagggaagattaagcctcatc 63
||||||||||||||| | |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 321 gaattcattcattttgaagtgtatgctgctgtaacctggaagagaatattaagcctcatc 262
Query: 64 agaatgcacacacactcatcaagcagagagagagagacgtacctagtaaataaatagaaa 123
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 261 agaatgcacacacactcatcaagc----agagagagccgtacctagtaaataaatagaaa 206
Query: 124 ctgggtggcgacgtggctcagcaggttaagg-accctgacccctaacttgaccacctgat 182
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 205 ctgggtggcgacgtggctcagcaggttaaggaaccc-gacccctaacttgaccacctgat 147
Query: 183 ttccatccctgggacccacacgatagaagaggccgactgctgcaaattgtcttctaacct 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttccatccctgggacccacatgatagaagaggccgactgctgcaaattgtcttctaacct 87
Query: 243 ccacacatggaccgtaacatgccctgcacccaatcacgcctgcccccaacagaataatga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 ccacacatggaccgtaacatgccctgcacccaatcacgcctgcccccaacagaataatga 27
Query: 303 aataaattatttttcctccttgcttc 328
||||||||||||||||||||||||||
Sbjct: 26 aataaattatttttcctccttgcttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1090
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1080
Effective search space: 738720
Effective search space used: 738720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_c22.g1 MSMg01no535_c22.g1 CHROMAT_FILE:
MSMg01no535_c22.g1 PHD_FILE: MSMg01no535_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:55 2005
(676 letters)
>mm_chr16_89707674_89708750
Length = 1077
Score = 1094 bits (566), Expect = 0.0
Identities = 651/694 (93%), Gaps = 27/694 (3%)
Strand = Plus / Plus
Query: 1 ctaagcgaggtaactcagagaccgctggggtcagcacttcctctacagagagatttcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaagcgaggtaactcagagaccgctggggtcagcacttcctctacagagagatttcaaa 260
Query: 61 -taaaggattctgtacttctggcagtcatattcagttcctctattgctggaatgagccaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ataaaggattctgtacttctggcagtcatattcagttcctctattgctggaaggagccag 320
Query: 120 ccattctgtgaaatatgataatgactccagtttacaaaagagaggacaaactaagaaatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattctgtgaaatatgataatgactccagtttacaaaagagaggacaaactaagaaatg 380
Query: 180 aagagagggctggagagacagctcagctgctaaacattctactttactagaacaagaacc 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 aagagagggctggagagacagctcagctgctaaacgttctactttactagaacaagaacc 440
Query: 240 taggttcaacaagcagttaggtgtggtggcgtgggcttgaaatcctgggggtcaggggga 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 taggttcaacaagcagttaggtgtggtggcatgggcttgaaatcctgggggtcaggggga 500
Query: 300 agcagagatgggcagagccggagggatcactctccagtacagcctggttggtgagttaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcagagatgggcagagccggagggatcactctccagtacagcctggttggtgagttaga 560
Query: 360 accagtaagagacctagaaaagttgggttatccctgaggagctgtaccctgggctttcat 419
|| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |
Sbjct: 561 actggtaagagacctaaaaaagttgggttatgcctgaggagctgtaccctgggttttctt 620
Query: 420 ctggcctccatatgaatgtgtgccatacacatatgtgtataagcacacacagacacatag 479
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 ctggcctccatatgaatgtgtgccatacacatatgtgtacaagcacacacagacacatag 680
Query: 480 acacatccatacacacacatacacatatacacacacagacacccacatacaaacacacac 539
||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 681 acacatccatacacacacatacaca--------cagagacacccacatacaaacacacac 732
Query: 540 acataca----------------catgtgtacatgaatgagggttccatacacatatgtg 583
||||||| |||||||||||||||||| || |||||||||||||||
Sbjct: 733 acatacaggcacacacatacccacatgtgtacatgaatgagtgtgccatacacatatgtg 792
Query: 584 tactaacatacacagacacatgcgtgcacatgcacatacacacacatgca-tacacacac 642
|||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||
Sbjct: 793 tactaacatacacagacacatgcgtgcacatgcacatatatacacatg-agtacacacac 851
Query: 643 agacacacttgtgtacacacacagataccttcat 676
||||||||||||||||||||||||||||||||||
Sbjct: 852 agacacacttgtgtacacacacagataccttcat 885
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1077
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1067
Effective search space: 710622
Effective search space used: 710622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
