Query= MSMg01no535_d18.b1 MSMg01no535_d18.b1 CHROMAT_FILE:
MSMg01no535_d18.b1 PHD_FILE: MSMg01no535_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:59 2005
(665 letters)
>mm_chr16_46388563_46389626
Length = 1064
Score = 1236 bits (639), Expect = 0.0
Identities = 651/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 7 gaattctctgtcttcctcagaggttaatttcccttaatagcactcagtagatctatgaag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattctctgtcttcctcagaggttaatttcccttaatagcactcagtagatctatgaag 801
Query: 67 cccagggttacacacagtttttcaactgaatggacaccattgttttggttttcagtgctt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cccagggttacacacagtttttcaactgaatggacaccattgttttggttttcagtgctt 741
Query: 127 tttttcaaggaacaatcaggattttaaatccactcgagtgtattgatgaaactaaattaa 186
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttttcaaggaacaataaggattttaaatccactcgagtgtattgatgaaactaaattaa 681
Query: 187 attcctctctgaaatcgtacaaacagccccagcattcattatattttaactagaggcagc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 attcctctctgaaatcgtacaaacagccccagcattcattatattttaactagaggcagc 621
Query: 247 agaggtttgttctgcaagtactagtttactccagggcacagtacagctcagccacacctc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaggtttgttctgcaagtactagtttactccagggcacagtacagctcagccacacctc 561
Query: 307 tgtactctcacatattctcgacataagtgcaaaattcccttaaattccctcgcttcagtg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtactctcacatattctcgacataagtgcaaaattcccttaaattccctcgcttcagtg 501
Query: 367 cccagacgactgtccagcatcttgggtttcactgaatactaaaaaaatcccaattccttt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cccagacgactgtccagcatcttgggtttcactgaatactaaaaaaatcccaattccttt 441
Query: 427 gtaaaagacctatattaagcagcaggtattgccgctagatcccctattgttccatttgtc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtaaaagacctatattaagcagcaggtattgccgctagatcccctattgttccatttgtc 381
Query: 487 tctaaaggttcctatcacccctctcccttctgctcctagctctaagctagtgctatccaa 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctaaaggttcctatcacccctctcccttctgctcctagctctaagctagtgctatccaa 321
Query: 547 ttttccatctccagcccatttgctcagtctccatgtggtcctcgcctcttaacatgtctg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cattccatctccagcccatttgctcagtctccatgtggtcctcgcctcttaacatgtctg 261
Query: 607 cttggcagctctgtcccttcgagccagcggttctctgtctcacaaggctgcactg 661
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttggcagctctg-cccttcgagccagcggttctctgtctcacaaggctgcactg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1064
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1054
Effective search space: 690370
Effective search space used: 690370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_d18.g1 MSMg01no535_d18.g1 CHROMAT_FILE:
MSMg01no535_d18.g1 PHD_FILE: MSMg01no535_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:59 2005
(596 letters)
>mm_chr16_46217720_46218715
Length = 996
Score = 1123 bits (581), Expect = 0.0
Identities = 593/597 (99%), Gaps = 2/597 (0%)
Strand = Plus / Plus
Query: 1 aagaaggtagactccagaaaatcaaataaccccattaaaaaatagggttcagagctaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaggtagactccagaaaatcaaataaccccattaaaaaatagggttcagagctaaac 260
Query: 61 aaagaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatgttcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatgttcaaca 320
Query: 121 tccttaatcatcagggaaatgcaaatcaaaacattcagtcatattttgtaatagcaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttaatcatcagggaaatgcaaatcaaaacattcagtcatattttgtaatagcaattt 380
Query: 181 gaaatataatttttctgataaattaaacaaatataattagctttagatatttttctaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatataatttttctgataaattaaacaaatataattagctttagatatttttctaact 440
Query: 241 gatttgttgactttaaggataggagtaatgatttttttttaattaggtattttcttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatttgttgactttaaggataggagtaatgatttttttttaattaggtattttcttcatt 500
Query: 301 cacatttccaatgctatccc-aaaagtccccaatactctccccgccccccactcacctac 359
|||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||
Sbjct: 501 cacatttccaatgctatccccaaaagtcccccatactctccccgccccc-actcacctac 559
Query: 360 ttactcattcccacttcttggccctggcattcccgtgtactgaggcatataaagtttgca 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcactcattcccacttcttggccctggcattcccgtgtactgaggcatataaagtttgca 619
Query: 420 agaccaaggggcctctcttcccaatgatgaccgactaggctatcttctgatacatatgca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaccaaggggcctctcttcccaatgatgaccgactaggctatcttctgatacatatgca 679
Query: 480 gctaagtctcagagtgcaaattttttgacactcccagcaacagtggctcttgcatgaggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gctaagtctcagagtgcaaattttttgacactcccagcaacagtggctcttgcatgaggc 739
Query: 540 attcattagtttggttcatttcttagcttcactctcccatgcctcacttatgctaga 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 attcattagtttggttcatttcttagcttcactctcccatgcctcacttatgctaga 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
