Query= MSMg01no535_e08.b1 MSMg01no535_e08.b1 CHROMAT_FILE:
MSMg01no535_e08.b1 PHD_FILE: MSMg01no535_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:02 2005
(726 letters)
>mm_chr16_74612367_74613491
Length = 1125
Score = 1311 bits (678), Expect = 0.0
Identities = 711/722 (98%), Gaps = 1/722 (0%)
Strand = Plus / Plus
Query: 5 gaattcattccagactttccatttacagccatttaagactatttgtattcaggaaacaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattccagactttccatttacagccatttaagactatttgtattcaggaaacaaa 264
Query: 65 ataacaagggacagctgtttccctgttttgctcttatttctaagctatttgaaaacattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataacaagggacagctgtttccctgttttgctcttatttctaagctatttgaaaacattt 324
Query: 125 agagaggctaaaaatataaaggagcatcttctttgtaacttaggatataactgagtcagg 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 agagaggctaaaaatataaaggagcatcttctttgtaacttaggatataagtgagtcagg 384
Query: 185 taaattagagtcaccaacagaaaagtcaatattttctttctaacctaaatttcaatcatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaattagagtcaccaacagaaaagtcaatattttctttctaacctaaatttcaatcatc 444
Query: 245 aatttcattctattttagcacacagtcttgttctacgtttttaacaagtgatatatattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatttcattctattttagcacacagtcttgttctacgtttttaacaagtgatatatattt 504
Query: 305 gatcttaacagttagaaagcagttcatagcatctcagatcctggctgtgacggtcctaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatcttaacagttagaaagcagttcatagcatctcagatcctggctgtgacggtcctaaa 564
Query: 365 tgcttcaatcgagcctcttgtggatactcaagctcaccatcatttgaagacctggcatca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcttcaatcgagcctcttgtggatactcaagctcaccatcatttgaagacctggcatca 624
Query: 425 tgaggtcattgctgagcagtcattacccacagttcattgcatcagaggattatggtttaa 484
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 agaggtcattgctgagcattcattacccacagttcattgcatcagaagattatggtttaa 684
Query: 485 agactaaccagttaatctgcaatttcagaaagggaatcaagttaacttagttacaaccat 544
|||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||
Sbjct: 685 agactaaccagttaatctgcaatttcagaaagcgaatcaagttaacttagttgcacccat 744
Query: 545 caggactctgtatcagcgggcagcactctacccccaaaagttcagctgtcttacaaagtc 604
|||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 745 caggactctgtagcagcgggcagcactcgacccc-aaaagttaagctgtcttacaaagtc 803
Query: 605 caacccaaccaggaaggaaaaggaaaaggatgggggtctaatgtgtatcttctatgattc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caacccaaccaggaaggaaaaggaaaaggatgggggtctaatgtgtatcttctatgattc 863
Query: 665 tatttatacagtgcactgcaatgcttgaagaattcaactttccagtgctggcaggctgac 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tatttatacagtgcactgcaatgcttgaagaattcaactttccagtgctggcaggctgac 923
Query: 725 at 726
||
Sbjct: 924 at 925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 726
Length of database: 1125
Length adjustment: 10
Effective length of query: 716
Effective length of database: 1115
Effective search space: 798340
Effective search space used: 798340
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no535_e08.g1 MSMg01no535_e08.g1 CHROMAT_FILE:
MSMg01no535_e08.g1 PHD_FILE: MSMg01no535_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:02 2005
(699 letters)
>mm_chr16_74758494_74759592
Length = 1099
Score = 1278 bits (661), Expect = 0.0
Identities = 685/693 (98%)
Strand = Plus / Minus
Query: 1 ttcatttaaaagcagttatcaaaacagaacaaaacaaaaataacactcttagtccacttg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ttcatttaaaagcagttaacaaaacagaacaaaacaaaaataacactcttagtccacttg 712
Query: 61 gtggggcaggaggcattgaaatacagatataggctttgttactttaagatacaatataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gtggggcaggaggcattgaaatacagatataggctttgttactttaagatacaatataat 652
Query: 121 tatgtggtgaaactcattttctctttttgttttattccaatttatgtttagcaaaattac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 651 tatgtggtgaaactcattttctctttttgttttattccaatttatgtttagcgaaattac 592
Query: 181 caactccacataagaaagtcctggtaattatttgtttagaattgctgggctgtgtacgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caactccacataagaaagtcctggtaattatttgtttagaattgctgggctgtgtacgaa 532
Query: 241 tgtggggacagttatctttattctttcttagacttattatagattgaaattaggctgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgtggggacagttatctttattctttcttagacttattatagattgaaattaggctgagc 472
Query: 301 tttctttgctgttatttttccagagcctttgggattagagatgatggattttggtggtgt 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tttctttactgttatttttccagagcctttgggattagagatgatggattttggtggtgt 412
Query: 361 tctgagtgcagttaagcccttgtcaacataagtataaagttattgctctgtgtagttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tctgagtgcagttaagcccttgtcaacataagtataaagttattgctctgtgtagttggt 352
Query: 421 atattttcaaaggtaattaacgctaaacattggaaggagcaggatgattagaagccctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atattttcaaaggtaattaacgctaaacattggaaggagcaggatgattagaagccctca 292
Query: 481 atatataggaggctgctctgtgctcacacacataaaatcttacacttcttacaattacat 540
||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 291 atatacaggaggctgctctgtgctcacacacataaaatcttacacgtcttacaactacat 232
Query: 541 ttttatttagagcagagagtatatagacaactggtgctgaatctccctaattctgggacc 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 231 ttttatttagagcagagagtatatagacaactggtgctgaatctccctaattctaggacc 172
Query: 601 cttcaatacagttgctcatgttgggctgacctgcatccaaaaaattatttttgttgctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cttcaatacagttgctcatgttgggctgacctgcatccaaaaaattatttttgttgctat 112
Query: 661 ttcataactgtaaccttgcaactgttgtgaatc 693
|||||||||||||||||||||||||||| ||||
Sbjct: 111 ttcataactgtaaccttgcaactgttgtaaatc 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
