NAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTGTTTAGCTCTGTGTCCCATTTTTTAATTGGGTTATTTG
GTTGTTGGTGCTTACCTTCTTGAGTTCTCTATACATTTTAGATATTAGCC
CTCTGTCAGATGTAGGGTTGGTGAAGATTCTTTCCCAATTTGCAGGCTGC
CATTTTGTCTTATTGACAGTGTCCTTTGCCTTACAGAAGCTTTGCAGTTT
TATTAGGTCCCAATTTTCAATTGTAGATCTTAGAGCCTAAGCCATTGGTG
TTCTGTTCAAGAATTTGTCTCCTGTACCACTATGTTCACATGTATTTCCT
ACTTCCTCTTCTATGAGACTTAGTGTATCTGGTTTTATGTTGAGGTCCTT
CAACCACTTGGATTTGAGTTTTCTGCAGGGTGATAATATGGATCCATTTT
TATTTTTCTACATGTAGACATCCAGTTTGACCAGGACCATTCCTGAAGAT
ACTTTCTTTTTTCCACTGTATGGTTTTTGACTCTTTTTTTTTTTTTTAAA
TCAGAAATCAAGTGTCCATAGGTCTGTGAGTTTATTTTTAGGTCTTTGAT
TCCATTGATCAATATGTCTGTTTCCGTACCAGTACCATGCAGTTTTTATC
ATTATTGCTTTGTAGTACAACTTGAGGTCAGGGATGGTGATTCTGCCTGA
AGTTCTTTTCTGGTTCAGAAATATTTTGACTATCCTGGGTTTTTTTGTTC
TN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCATCTAGGAAAAGCACAGAT
ACCTTGGTTGCATTGAGGTTGGCTATGTATTCACTTAACAGCACAGAATA
GTTAAGAAATTTGTCTGATCAGTTACCTTCAAGATATGTTGTCGGACTTC
ATTGGCATTATGTACCATTATGTTGCATGCCAATAGAGACATATCCCTAA
CAAGGGCCAGTTCTTCTGCCATTAAGTCAATCTGTTGTAAAATGTAGGTG
GCTTGATAAAGATGTTAATTTAGTACTTCCTGTGCCTATAGCACCTCAGC
TGACCCAGAGACTACAGCATTGACAGTCTCCACCATAGTGGCTTTCTGGG
TCAAGGCAAGAGCAGCTGTTGTTGCCCCAGCAATGCCTACAATGATGGCT
GAGATGATGGCAGCTGTAATAACAAAACCCCCACTTCCCCTGTGTAGGGG
ATGTAAATAAGTCTGGGCCATCAGAGTGATGGCATATAAGAGGAGTGATA
TTTACCATAGGCATCCAGTGGCTGTTGGTTCCCTCATCAGGATAGCCTTT
GTTGAATACCCCATCTAGCAGGTAGTCAGGACACATTTTTGTTGTTGTTG
TTGTTGAAGAAGTTAAGGCTGTCTCTGACAATGGAGGTACTTGTGACCAG
AAAGAAAAAGGGAGGTCAGACACAGACTGGGGTAGCTTTCTAGTCAACCT
GGGTGCCA

Query= MSMg01no537_f05.g1 MSMg01no537_f05.g1 CHROMAT_FILE:
MSMg01no537_f05.g1 PHD_FILE: MSMg01no537_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:40 2005
         (663 letters)



>mm_chr16_56980003_56981065
          Length = 1063

 Score = 1274 bits (659), Expect = 0.0
 Identities = 662/663 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcatctaggaaaagcacagataccttggttgcattgaggttggctatgtattcacttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 agcatctaggaaaagcacagataccttggttgcattgaggttggctatgtattcacttaa 804

                                                                       
Query: 61  cagcacagaatagttaagaaatttgtctgatcagttaccttcaagatatgttgtcggact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cagcacagaatagttaagaaatttgtctgatcagttaccttcaagatatgttgtcggact 744

                                                                       
Query: 121 tcattggcattatgtaccattatgttgcatgccaatagagacatatccctaacaagggcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcattggcattatgtaccattatgttgcatgccaatagagacatatccctaacaagggcc 684

                                                                       
Query: 181 agttcttctgccattaagtcaatctgttgtaaaatgtaggtggcttgataaagatgttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agttcttctgccattaagtcaatctgttgtaaaatgtaggtggcttgataaagatgttaa 624

                                                                       
Query: 241 tttagtacttcctgtgcctatagcacctcagctgacccagagactacagcattgacagtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttagtacttcctgtgcctatagcacctcagctgacccagagactacagcattgacagtc 564

                                                                       
Query: 301 tccaccatagtggctttctgggtcaaggcaagagcagctgttgttgccccagcaatgcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tccaccatagtggctttctgggtcaaggcaagagcagctgttgttgccccagcaatgcct 504

                                                                       
Query: 361 acaatgatggctgagatgatggcagctgtaataacaaaacccccacttcccctgtgtagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acaatgatggctgagatgatggcagctgtaataacaaaacccccacttcccctgtgtagg 444

                                                                       
Query: 421 ggatgtaaataagtctgggccatcagagtgatggcatataagaggagtgatatttaccat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggatgtaaataagtctgggccatcagagtgatggcatataagaggagtgatatttaccat 384

                                                                       
Query: 481 aggcatccagtggctgttggttccctcatcaggatagcctttgttgaataccccatctag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aggcatccagtggctgttggttccctcatcaggatagcctttgttgaataccccatctag 324

                                                                       
Query: 541 caggtagtcaggacacatttttgttgttgttgttgttgaagaagttaaggctgtctctga 600
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caggtagtcaagacacatttttgttgttgttgttgttgaagaagttaaggctgtctctga 264

                                                                       
Query: 601 caatggaggtacttgtgaccagaaagaaaaagggaggtcagacacagactggggtagctt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caatggaggtacttgtgaccagaaagaaaaagggaggtcagacacagactggggtagctt 204

              
Query: 661 tct 663
           |||
Sbjct: 203 tct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)