Query= MSMg01no537_j23.b1 MSMg01no537_j23.b1 CHROMAT_FILE:
MSMg01no537_j23.b1 PHD_FILE: MSMg01no537_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:02 2005
(587 letters)
>mm_chr16_6025137_6026123
Length = 987
Score = 735 bits (380), Expect = 0.0
Identities = 380/380 (100%)
Strand = Plus / Minus
Query: 208 ggtacttatttgtcaccccagcttggaggaaacaaagacagctggatctctggggcccac 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ggtacttatttgtcaccccagcttggaggaaacaaagacagctggatctctggggcccac 928
Query: 268 tggccatccatcctcgcttaatgggacagttaaatggcagtggacagactctgtctcaaa 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tggccatccatcctcgcttaatgggacagttaaatggcagtggacagactctgtctcaaa 868
Query: 328 atatgaaggcagtcagcacctgagaaataacacacacacacacacacacagagacataca 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 atatgaaggcagtcagcacctgagaaataacacacacacacacacacacagagacataca 808
Query: 388 gacacacacacacacacacaaagaggaaatgaggacagattggaagtcagggacacaggg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gacacacacacacacacacaaagaggaaatgaggacagattggaagtcagggacacaggg 748
Query: 448 ttgggggcaaatttctgaagtcaaacctctacctttcccccatttcatttcattcccatt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttgggggcaaatttctgaagtcaaacctctacctttcccccatttcatttcattcccatt 688
Query: 508 tcattatttcattcacacctggagttggctcactgagaatccagaaggcctacactggtc 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcattatttcattcacacctggagttggctcactgagaatccagaaggcctacactggtc 628
Query: 568 tccctggatctttcactggc 587
||||||||||||||||||||
Sbjct: 627 tccctggatctttcactggc 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_j23.g1 MSMg01no537_j23.g1 CHROMAT_FILE:
MSMg01no537_j23.g1 PHD_FILE: MSMg01no537_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:02 2005
(571 letters)
>mm_chr16_5872891_5873861
Length = 971
Score = 1104 bits (571), Expect = 0.0
Identities = 571/571 (100%)
Strand = Plus / Plus
Query: 1 tccattgttgctggactccactctactcatgcccattgtcttagttggcatacgtaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccattgttgctggactccactctactcatgcccattgtcttagttggcatacgtaaatc 260
Query: 61 tgagcctgtggtgtgcgatgctgtgctagagaaatatgaacttgctgtagttcagctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagcctgtggtgtgcgatgctgtgctagagaaatatgaacttgctgtagttcagctctt 320
Query: 121 ggagtggggttcagttttcaccaagtgccaccctggagcctccaggaatatcagtgctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagtggggttcagttttcaccaagtgccaccctggagcctccaggaatatcagtgctca 380
Query: 181 gcacccacaagcctggctgttcaccgatgtttcctcagattacctgcaatgtgttcttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacccacaagcctggctgttcaccgatgtttcctcagattacctgcaatgtgttcttaa 440
Query: 241 ggaccttcctttcccagtgatcgcttttgtttggaggtgtatgcctcttaattgaagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaccttcctttcccagtgatcgcttttgtttggaggtgtatgcctcttaattgaagaag 500
Query: 301 gagagttaaatggaaataatgtatgtgcaaatagtgagcacagtaatgcacggtttgacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagagttaaatggaaataatgtatgtgcaaatagtgagcacagtaatgcacggtttgacc 560
Query: 361 atgatttatagatctctaactgcgcagaccatctataagccaccagtaaccactgccgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgatttatagatctctaactgcgcagaccatctataagccaccagtaaccactgccgat 620
Query: 421 gcacattcttcttggcggggttgcatatttcattctaaatggcttcaatgtctttactta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcacattcttcttggcggggttgcatatttcattctaaatggcttcaatgtctttactta 680
Query: 481 tccatttgtaataaaatgagtgagactgaaaatgaagtgcatttgaaagaaatcgatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccatttgtaataaaatgagtgagactgaaaatgaagtgcatttgaaagaaatcgatccc 740
Query: 541 ctataccccgtgttgctaagacacagagcat 571
|||||||||||||||||||||||||||||||
Sbjct: 741 ctataccccgtgttgctaagacacagagcat 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
