GAAGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATCTCTCTATCTATAGACTTAACAAGGGGAACCCTGGCA
GCTTAATTTTACAACAGGAACCTCCACTGCCATGTGGGCAAACACCTACA
GGGTCCTTACCACTAAACAGTGTTTTCAATATATATGGGCTCCTGGTCCA
AGCATAACCTGAATCATTTCTTAAGAACTTGAAACTGGTTTATATATACC
CTTCTGATGGCTGGCCCTAGAGTAGTTTGGGAAGTGTAAGGCTGGCAGCA
TCTGCCCATTGTGAAGGGAAAGATAGGCTTGCTGGGGTATATCGAAAATA
AAGCAGAGTAAAGCATAAAATACAGATTCAATTCCTGGTTCTGTGTTATT
CTGTTTCTTCCTTATTCAGTTCCCAATGCTTTAAATTTCCCTTGCAGAAC
CGCCTCCCCAGTCCCTTAGTCTAGACCATTTGCACAACCAATTTCTGAGG
GAGGGTTTGTCACCACCAAGCCAAGCAACAACATCTTCCTTGGGCCACAA
CTACAATCCCAGATGTGAATATATGATTCAGATAGAGTCAGTTCATCCCA
GGATTTAAGCTGGCGAGACTAGGAGAGAGACCTCCTTATCTATATTAGAC
TTGAAACTGGATGACTTGAGCCAGAAACTGGTGGCCACCATCCGGCTTTC
ACAGGAAGACAGGCTACATGAAAATGGAAACAACACATCAGAA

NNNAACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGCTAGAGGCACAGAAAA
TATTTTCAATAAAATCAAAGAGGAAAATAACCCAAATGCAGTGAAAGAGA
TGCACATGCATATGTAAGAGACACAAAACACCAAATAGACAGAATCAGAA
ATGAAACAACACCCTCTGCCATACTGTAGTAAAACATTAAATATGCAGAA
CAAAGAAAATGTATTTTTTTAAAAAGAAAATTAACAGCTTCAAGAGAGAA
CCATCAAACCACATACAAACAAAAAAACCTCCTACAGAGCCATCAGAATA
ACTACTTGCTTCTCAATGGGAACCTTAACAGCCAGAGAGGCTTGGAATGG
TGCTTTGGAATTTCTCCACAGGGGACACAGGTGACAACTGAGACCTGGGA
AGTCAGCAAAAGTATCAGTTATGATAGAAGGAGAAGGAGTCCATTCAACA
ATGAGGGAGCCTACAGAATGCAAGAAATCTGAGAGCTAATATCCAGAATG
TACAAGGAGCTAAAAAAACAAAACAAAACAAAACAAAAACCTGAACACTG
AGAAGCTGATAGAGGAGGGAGTGAGCCGCTCATGATAGAAGTGTTTTCAT
GTGACCCTGGTAGTCTGGGTCTGAACTCAGAAACTCCGTGGCAGAAGGAG
CACGGATTCACAAAATTTGGTTTTGACCACCATATGCATGCTGTGAN

Query= MSMg01no537_o09.b1 MSMg01no537_o09.b1 CHROMAT_FILE:
MSMg01no537_o09.b1 PHD_FILE: MSMg01no537_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:24 2005
         (539 letters)



>mm_chr16_12092003_12092940
          Length = 938

 Score = 1025 bits (530), Expect = 0.0
 Identities = 536/538 (99%), Gaps = 1/538 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gacttaacaaggggaaccctggcagcttaattttacaacaggaacctccactgccatgtg 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 737 gacttaacaaggggaaccctggcagcttaattttacaacaggcacctccactgccatgtg 678

                                                                       
Query: 61  ggcaaacacctacagggtccttaccactaaacagtgttttcaatatatatgggctcctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggcaaacacctacagggtccttaccactaaacagtgttttcaatatatatgggctcctgg 618

                                                                       
Query: 121 tccaagcataacctgaatcatttcttaagaacttgaaactggtttatatatacccttctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tccaagcataacctgaatcatttcttaagaacttgaaactggtttatatatacccttctg 558

                                                                       
Query: 181 atggctggccctagagtagtttgggaagtgtaaggctggcagcatctgcccattgtgaag 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 557 atggctggccctagagtagtttgggaagtgt-aggctggcagcatctgcccattgtgaag 499

                                                                       
Query: 241 ggaaagataggcttgctggggtatatcgaaaataaagcagagtaaagcataaaatacaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggaaagataggcttgctggggtatatcgaaaataaagcagagtaaagcataaaatacaga 439

                                                                       
Query: 301 ttcaattcctggttctgtgttattctgtttcttccttattcagttcccaatgctttaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttcaattcctggttctgtgttattctgtttcttccttattcagttcccaatgctttaaat 379

                                                                       
Query: 361 ttcccttgcagaaccgcctccccagtcccttagtctagaccatttgcacaaccaatttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcccttgcagaaccgcctccccagtcccttagtctagaccatttgcacaaccaatttct 319

                                                                       
Query: 421 gagggagggtttgtcaccaccaagccaagcaacaacatcttccttgggccacaactacaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gagggagggtttgtcaccaccaagccaagcaacaacatcttccttgggccacaactacaa 259

                                                                     
Query: 481 tcccagatgtgaatatatgattcagatagagtcagttcatcccaggatttaagctggc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcccagatgtgaatatatgattcagatagagtcagttcatcccaggatttaagctggc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 938
Length adjustment: 10
Effective length of query: 529
Effective length of database: 928
Effective search space:   490912
Effective search space used:   490912
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)