XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGCCT
GCCTCTGCTTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCACTGCCCG
GCAATCTTTTTTTTTAAAGGAAATATTAATAGCAAATATGGAAATAGCAG
ATACAGGGCATATAGTAAGTGCTGAGTAGATGTCCACTCTTACCATCTTG
AGTGACAGCTGGTGATTGTATTGATCTTCTGAAATCCCACTAGGGTGCAA
TGTAAATTAATAGATAGACTACTCAGGCCCAGTGTAAGTTAATAGGTAGA
TAGATTAGTGATGCCTGCCTTGGAAGTGGAATAGAAGTCAGATTCTCCTG
AAGTTGTATACAGCAATGGCCATTCCTGTGAGAACAATGTCGGATTCATT
TCTTTCTTCCCCAGACCCTTCCCCAAGATTCTCCACATAGGCAACCCTCA
TCAAATACATGGTTAATCATTAGCTGGTTAGAATCCTTGTGAGTTGACAT
TAGGCAGCAGGAGGAGGAATGGGGACCAAAAGTAGGTGCAGAGCCAGCTA
CAAACTCTCTCTCACTTACATGAGCATTATATCACCCTTTCATAGACCAA
GCTTGGCCAGGATTGAATAATCTTACCAGTGGGTAGACGCTTGCTTTGAA
ATTGACTAGGCTGGTGTGCAGTAGGGAATGTAAAAACCCAATTTAATGTA
TGATGCTGAAGAACTGGAGACATAGAGTGCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAGAATGGCCACTTCAAAAGGTTTATACCCACTTTC
TAGGAATTGGAAGTTATCTCAGATAAAATAAAGTGTGTGATGGCTTAAAT
GTGTGAGGCCAGAAGGTCAAGTAGGAAAATTAAGGCCTTATGTGGCTGAC
ATAGCCATAAATTTATGGGGACAAGATTTATTACAGCAGTGGAGAACTCA
GATTAATATTCCCTCAATACCAAAAACAACTCCTAAAATAAGGGGTAAAA
TAGACTTTGCTACAGCAGAAGGCTGTAGCAAACAGAACAACCCCAGATTG
TCCAGGTTGTCAGGACACAACAGGGATTGAGTTTCCAAATTTGTAAAGGG
GGTCTCTACTGAAATTATACCAATGGCCCTACCTTAAGATTACAGGCAGG
CAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGA
GTTCCAGGACAGCCAGGGCTACACAGAGAAACTCTGTTTCGAAAAACCCN
TNNNAAAAAAAAAAAAAAAAAAAAAGATTACAGGCACTTAGCAGTTGGTA
CAGAGTATCGGGAAGCTCAGCATGTAGAAGAGTCTACAAGCCTATGGGCT
TCCTGTATTTGTATTTAAAAAATTGGAGAGATGGGGAATGTTAGCAATTT
TATAACCGTGAATAGGGTAATCCAACCCATGGGTCCATTACAGCCTGG

Query= MSMg01no538_o09.b1 MSMg01no538_o09.b1 CHROMAT_FILE:
MSMg01no538_o09.b1 PHD_FILE: MSMg01no538_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:40 2005
         (628 letters)



>mm_chr16_30626388_30627416
          Length = 1029

 Score = 1170 bits (605), Expect = 0.0
 Identities = 620/625 (99%), Gaps = 1/625 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgcctgcctctgcttcccaagtgctgggattaaaggcgtgcaccaccactgccc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gaattctgcctgcctctgcttcccaagtgctgggattaaaggcgtgcaccaccactgccc 843

                                                                       
Query: 65  ggcaatctttttttttaaaggaaatattaatagcaaatatggaaatagcagatacagggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ggcaatctttttttttaaaggaaatattaatagcaaatatggaaatagcagatacagggc 783

                                                                       
Query: 125 atatagtaagtgctgagtagatgtccactcttaccatcttgagtgacagctggtgattgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atatagtaagtgctgagtagatgtccactcttaccatcttgagtgacagctggtgattgt 723

                                                                       
Query: 185 attgatcttctgaaatcccactagggtgcaatgtaaattaatagatagactactcaggcc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 attgatcttctgaaatcccactagggtgcaatgtaaattaatagatagactactcaggcc 663

                                                                       
Query: 245 cagtgtaagttaataggtagatagattagtgatgcctgccttggaagtggaatagaagtc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagtgtaagttaataggtagatagattagtgatgcctgccttggaagtggaatagaagtc 603

                                                                       
Query: 305 agattctcctgaagttgtatacagcaatggccattcctgtgagaacaatgtcggattcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agattctcctgaagttgtatacagcaatggccattcctgtgagaacaatgtcggattcat 543

                                                                       
Query: 365 ttctttcttccccagacccttccccaagattctccacataggcaaccctcatcaaataca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 542 ttctttcttccccagacccttccccaagattctccacataggcaaccctcatcaaatatg 483

                                                                       
Query: 425 tggttaatcattagctggttagaatccttgtgagttgacattaggcagcaggaggaggaa 484
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 482 tggttaatcattagctggttagaatccttgtgagttgacattaggcagcaggaggaagaa 423

                                                                       
Query: 485 tggggaccaaaagtaggtgcagagccagctacaaactctctctcacttacatgagcatta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tggggaccaaaagtaggtgcagagccagctacaaactctctctcacttacatgagcatta 363

                                                                       
Query: 545 tatcaccctttcatagaccaagct-tggccaggattgaataatcttaccagtgggtagac 603
           |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 362 tatcaccctttcataggccaagctgtggccaggattgaataatcttaccagtgggtagac 303

                                    
Query: 604 gcttgctttgaaattgactaggctg 628
           |||||||||||||||||||||||||
Sbjct: 302 gcttgctttgaaattgactaggctg 278


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space:   629742
Effective search space used:   629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)