Query= MSMg01no539_j21.b1 MSMg01no539_j21.b1 CHROMAT_FILE:
MSMg01no539_j21.b1 PHD_FILE: MSMg01no539_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:38 2005
(669 letters)
>mm_chr16_26707070_26708138
Length = 1069
Score = 1178 bits (609), Expect = 0.0
Identities = 651/665 (97%), Gaps = 2/665 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaatttattcaaaatgaggtattaattccaaaggccctccatcctgcctcctg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gaattctcaatttattaaaaatgaggtattaattccaaaggccctccatcctgcctcctg 809
Query: 65 ctctagaagccaagtctgcagtcactgcgttcttcgctcacctctcccttttctcaaagg 124
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 808 ctctagaaaccaagtctgcagtcactgcgcacttcgctcacctctcccttttctcaaagc 749
Query: 125 tatcagggaaaacaagcatcttgctgtgacagggtgtgacttctggcagaatatggcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tatcagggaaaacaagcatcttgctgtgacagggtgtgacttctggcagaatatggcttt 689
Query: 185 cctttctttatttttcaatttgtatatgtctttattttctatcatcttcaaccaacaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cctttctttatttttcaatttgtatatgtctttattttctatcatcttcaaccaacaaac 629
Query: 245 ctgttctttttagcctgagctttgtgcacagaaatgtctactcttctttttacaatttta 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctgttcttcttagcctgagctttgtgcacagaaatgtctactcttctttttacaatttta 569
Query: 305 tttcagcatttgtcgaactataggtagtcaatgggcctgcttctccaccccttcccagtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tttcagcatttgtcgaactataggtagtcaatgggcctgcttctccaccccttcccagtc 509
Query: 365 ccaactaaactggctcttcctacccttccaggtgggaactttttgtccatcctctctctt 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 508 ccaactaaactggctcttcctacccttccaggtgggaactttttgtctatcctatctctt 449
Query: 425 ggt-tgcttggaatcccaatgaactttcccagaacaggaatattactctttatttatgta 483
||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 448 ggtct-cttggaatcccaatgaactttcccagaaccggaatattactctttatttatgta 390
Query: 484 cttgcttttcacgcatgaagataaccaaagaatcccagtgtatcaatcaaaggtagaaac 543
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 389 cttgcttttcactcatgaagataaccaaagaatcccagtgtaacaatcaaaggtagaaac 330
Query: 544 atctacttcctctattagctgtggtcctgtagctgaagactttgagaaatatacagtgtt 603
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atccacttcctctattagctgtggtcctgtagctgaagactttgagaaatatacagtgtt 270
Query: 604 tgctgggcatgaagtaggggttagtattggttggtttgctaatgacttccttgtcatgca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgctgggcatgaagtaggggttagtattggttggtttgctaatgacttccttgtcatgca 210
Query: 664 tttga 668
|||||
Sbjct: 209 tttga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_j21.g1 MSMg01no539_j21.g1 CHROMAT_FILE:
MSMg01no539_j21.g1 PHD_FILE: MSMg01no539_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:38 2005
(659 letters)
>mm_chr16_26562372_26563430
Length = 1059
Score = 1259 bits (651), Expect = 0.0
Identities = 657/659 (99%)
Strand = Plus / Plus
Query: 1 aaaggtcaaatattttttaaatatttcaaaatatatttgctatgttcagggtgctcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtcaaatattttttaaatatttcaaaatatatttgctatgttcagggtgctcttta 260
Query: 61 aaatccataaacacagggctctcatcttcaattattaacaagccactatatggctgagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatccataaacacagggctctcatcttcaattattaacaagccactatatggctgagta 320
Query: 121 ctttgatcctatcaatcaggaggcagagtcaaaggcagatagatggctatgagttcaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgatcctatcaatcaggaggcagagtcaaaggcagatagatggctatgagttcaagg 380
Query: 181 ctagcctgatgtacatagtgagttccagccaaccatgtttacacagtaagactcagtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagcctgatgtacatagtgagttccagccaaccatgtttacacagtaagactcagtcta 440
Query: 241 agaaaataaaataataatgatgatactattattatcattattaagttagcaattggtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaataaaataataatgatgatactattattatcattattaagttagcaattggtcat 500
Query: 301 aacaaaatagaaggtataataatatctatccagcactcacaagatataagttgccaattg 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 aacaaaatagaaggtataataatatctatccagcactcacaagatgtaagttgccaattg 560
Query: 361 cttcatttttgcttgaggtctcaccttcaactaggtaagaactgatgttaggcaaactat 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcgtttttgcttgaggtctcaccttcaactaggtaagaactgatgttaggcaaactat 620
Query: 421 cttccagttgactggttagagagaagacatttaaacatggactctgtaactctggacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttccagttgactggttagagagaagacatttaaacatggactctgtaactctggacctg 680
Query: 481 aggttatatttgctatccagagaactttgcacctcaaattcttgagccactctgattaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggttatatttgctatccagagaactttgcacctcaaattcttgagccactctgattaaa 740
Query: 541 gatttatgccattgaattgatttaattaactatttgtagtgtccacaactggatctgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatttatgccattgaattgatttaattaactatttgtagtgtccacaactggatctgatt 800
Query: 601 ctgagcagtctttgccactcaaacagcacacggctgattccaagaagtgcttgctgaca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgagcagtctttgccactcaaacagcacacggctgattccaagaagtgcttgctgaca 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
