Query= MSMg01no541_b06.b1 MSMg01no541_b06.b1 CHROMAT_FILE:
MSMg01no541_b06.b1 PHD_FILE: MSMg01no541_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:35 2005
(691 letters)
>mm_chr16_56660296_56661386
Length = 1091
Score = 1282 bits (663), Expect = 0.0
Identities = 681/687 (99%)
Strand = Plus / Minus
Query: 5 gaattccagataccatattcctcaagtacaggaaacacattctaaatgaatataaatcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gaattccagataccatattcctcaagtacaggaaacacattctaaatgaatataaatcat 832
Query: 65 ttttagactatctttaagtattatatctctttcttagtaggagttgattaaacatggtgc 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 831 ttttagactatctttaagtattatatctctttcttactaggagttgattaaacatggtgc 772
Query: 125 atatacattaaatgcattctaattttattaacagcattttgcatatgtaaacacatgatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 atatacattaaatgcattctaattttattaacagcattttgcatatgtaaacacatgatt 712
Query: 185 tatattattaaaatatctcaagggaacacagcagttccatttgcccatggaatagatagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tatattattaaaatatctcaagggaacacagcagttccatttgcccatggaatagatagg 652
Query: 245 ttggcatttgaatttttattaggcccattcctatagctctaaggaagttaggactgtttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttggcatttgaatttttattaggcccattcctatagctctaaggaagttaggactgtttc 592
Query: 305 atttgatcagaatggtttataaactttaataggactacagccatagtgaccagttgttaa 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 591 atttgatcagaatggtttataaactttaataggactacagccataatgaccagttgttaa 532
Query: 365 ctgtgttgaattaagtctgcttcttctaacttatattccacactgcacactgttaacaga 424
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 531 ctgtgttgaattaagtctgcttcttctaacttatattccacattgcacactgttaacaga 472
Query: 425 tagaggcccttcagatgtggtgatggcttctgtgggagatgatgaagtggaaaactaagt 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tagaggcccttccgatgtggtgatggcttctgtgggagatgatgaagtggaaaactaagt 412
Query: 485 aaccatgaagactgacttgtgcatacaaagtcgtttcaaataatggaaaacaactatttt 544
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 411 aaccatgaagactgacttgtgcatacaaagtcgtttgaaataatggaaaacaactatttt 352
Query: 545 tactattttcattctataattaatatctaactagaattatttttgagaaacaagactaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tactattttcattctataattaatatctaactagaattatttttgagaaacaagactaca 292
Query: 605 tatgacagctaatttagtaggctaggtttagaaaagtgaaaaattcttttccaacatttt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tatgacagctaatttagtaggctaggtttagaaaagtgaaaaattcttttccaacatttt 232
Query: 665 tagggatatttaaagttgatttttgaa 691
||||||||||| |||||||||||||||
Sbjct: 231 tagggatatttgaagttgatttttgaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_b06.g1 MSMg01no541_b06.g1 CHROMAT_FILE:
MSMg01no541_b06.g1 PHD_FILE: MSMg01no541_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:35 2005
(658 letters)
>mm_chr16_56486603_56487660
Length = 1058
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%), Gaps = 2/659 (0%)
Strand = Plus / Plus
Query: 1 agtcctgttccaaataggctgtcagtggtgtagtgcggtctccttccagtttcctggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcctgttccaaataggctgtcagtggtgtagtgcggtctccttccagtttcctggatg 260
Query: 61 gagttaagctcttcctcgccagattgttcaggagaaagcatcaaccctgcattcttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagttaagctcttcctcgccagattgttcaggagaaagcatcaaccctgcattcttcttc 320
Query: 121 tggttcatcctctccagataccctggtgactgggctatcactaacatcttccctaaacgc 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 tggttcatcctctccagataccctggtgactgggctatcactaacgtcttccctaaacgc 380
Query: 181 tcatattttcacccggctcagaatattgtgcatgcagctccactgaggtttactctaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatattttcacccggctcagaatattgtgcatgcagctccactgaggtttactctaatc 440
Query: 241 tgtagttcgttatgaattggaaggataaatgttcaaagatataggttagtaggtaactaa 300
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 441 tgtagttcgttatgaattggaaggataaatgttcaaagatataggtta-tgggtaactaa 499
Query: 301 gagaaataaataagagttgctagttaataaaccctctttgaacatcagatttttt-cccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 gagaaataaataagagttgctagttaataaaccctctttgaacatcagatttttttcccc 559
Query: 360 tctgaaaagagcataaaatatcagctattttgcttttgcaaacaaataacactagggtaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctgaaaagagcataaaatatcagctattttgcttttgcaaacaaataacactagggtaa 619
Query: 420 ctttaatgaatcttttgatttttgttttgtatatctggtgtgtgtttatgtatgtgcgta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctttaatgaatcttttgatttttgttttgtatatctggtgtgtgtttatgtatgtgcgta 679
Query: 480 tgtttatagaggtagtgctagaagttgatatcaggtttcttcctcattgtttacctcatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtttatagaggtagtgctagaagttgatatcaggtttcttcctcattgtttacctcatt 739
Query: 540 tgtttgagacaagttctctcattgaatctggacctcactaactagcaagctggctgagca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgtttgagacaagttctctcattgaatctggacctcactaactagcaagctggctgagca 799
Query: 600 gtgtgctctggaaatccatctatttctactttcccagtactggtattatagacatgtgc 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gtgtgctctggaaatccatctatttctactttcccagtactggtattatagacatgtgc 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
