Query= MSMg01no541_n05.b1 MSMg01no541_n05.b1 CHROMAT_FILE:
MSMg01no541_n05.b1 PHD_FILE: MSMg01no541_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:38 2005
(677 letters)
>mm_chr16_82597862_82598939
Length = 1078
Score = 1257 bits (650), Expect = 0.0
Identities = 668/674 (99%), Gaps = 1/674 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaatagcctgacctgagacaaatttacgggtagttctatgagaagttgtgtat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gaattctcaatagcctgacctgagacaaatttacgggtagttctatgagaagttgtgtat 749
Query: 65 attaggttaattgaaatgggaagacccaacttaagtgtgggtggtaccagtccaaatgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 attaggttaattgaaatgggaagacccaacttaagtgtgggtggtaccagtccaaatgct 689
Query: 125 cacatcctaacttacaaaggagagagaagatgctaagtactctagtatctatctgtgttt 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 cacatcctaacttacaacggagagagaagatgctaagtactctagtatctatctgtgttt 629
Query: 185 gcattctagctgcagatctgttagtacagattgcaaaaagtccaggcattatttttattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gcattctagctgcagatctgttagtacagattgcaaaaagtccaggcattatttttattg 569
Query: 245 acaaatgaaagttcctttataatatttattcaattttagtaattggctg-ggttttttct 303
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 568 acaaatgaaagttcctttataatatttattcaattttagtaattggctgagttttttttt 509
Query: 304 gtttttttaatgatctttattgtattactctgcaagttcattaataaaatgctacaaaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtttttttaatgatctttattgtattactctgcaagttcattaataaaatgctacaaaat 449
Query: 364 caaaattgttcatgtcttaggattagaggtggagagattagcctcccattttattattat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 caaaattgttcatgtcttaggattagaggtggagagattagcctcccattttattattat 389
Query: 424 tatttttttactttgtattgattgctgtcttttaaatctttagaatgaaagttttaattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tatttttttactttgtattgattgctgtcttttaaatctttagaatgaaagttttaattt 329
Query: 484 acctattaaagatcagttcataaatttgctattagatatgaaagcagttttaatagtctt 543
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 328 acctattaaagatcagttcataaatttgctattagatatgaaagcaattttaatagtctt 269
Query: 544 tgtttccattataaagtctcttgaaaagagtgtgaatgaatccttggaaattttgctcta 603
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgtttccattataaaatctcttgaaaagagtgtgaatgaatccttggaaattttgctcta 209
Query: 604 tgttgcaaaatttttatatttgcctttttactgttgggaaactttttattttatatttat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgttgcaaaatttttatatttgcctttttactgttgggaaactttttattttatatttat 149
Query: 664 tagtgttttaacta 677
||||||||||||||
Sbjct: 148 tagtgttttaacta 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1078
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1068
Effective search space: 712356
Effective search space used: 712356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_n05.g1 MSMg01no541_n05.g1 CHROMAT_FILE:
MSMg01no541_n05.g1 PHD_FILE: MSMg01no541_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:38 2005
(666 letters)
>mm_chr16_82413316_82414381
Length = 1066
Score = 1228 bits (635), Expect = 0.0
Identities = 656/663 (98%)
Strand = Plus / Plus
Query: 1 tgaacacttttactttcatggatgcacttatcctgacattttaagtttttctagtattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacacttttactttcatggatgcacttatcctgacattttaagtttttctagtattca 260
Query: 61 agtgagtgaatgaatgcttcattaatgcttattttatttttgattcgtttgtctcctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgagtgaatgaatgcttcattaatgcttattttatttttgattcgtttgtctcctttg 320
Query: 121 aaagcttatgacatggtagtgttcctgatgagaaggaatgtatttaaaaatgaagcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagcttatgacatggtagtgttcctgatgagaaggaatgtatttaaaaatgaagcaagt 380
Query: 181 aaaagaatagaactgaaagaataaatgaggagtagtgtgattaacagtaggcatttaaga 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 aaaagaatagaactgaaagaataaatgaggagtactgtgattaacagtaggcatttaaga 440
Query: 241 gatttcataagatccttgatgctaataaactctccatacagagtagagcaaaggtaggag 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gatttcataagatccttgatgctaataaactctacatacagagtagagcaaaggtaggag 500
Query: 301 acaagggccagttataaagatccacatctgagatgagaagtattccattctgtaaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaagggccagttataaagatccacatctgagatgagaagtattccattctgtaaatcaa 560
Query: 361 cctcatttcctttagccattcttaagctgagggacattgggtggcttcaagtttctgact 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 cctcatttcctttagccattcttaagctgagggaaattgggtggcttcaagtttctgact 620
Query: 421 gttatgaataaggctgctatgaattttgtggcgcatgtgtccttgctcaagaatggtaca 480
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 621 gttatgaataaggctgctatgaattttgtggtgcatgtgtccttgctcaagagtggtaca 680
Query: 481 gttgtgtcttcaggtggaactatttcacttttctgagaaattgccagattgatttccaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttgtgtcttcaggtggaactatttcacttttctgagaaattgccagattgatttccaga 740
Query: 541 atggttgtaacagtttgccacaagcaatggagacattttccccgttttacatctccttac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atggttgtaacagtttgccacaagcaatggagacattttccccgttttacatctccttac 800
Query: 601 cattctgtgctgtgccttgaacttttgatgttagtctttctgcctggtatactgtggaac 660
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cactctgtgccgtgccttgaacttttgatgttagtctttctgcctggtatactgtggaac 860
Query: 661 ctc 663
|||
Sbjct: 861 ctc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
