TTTTTTTATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCACCTTAGCACGCCTTCGATGCTATCAGAGAGTTTTT
GGTCACTCCTGTATCATTTCTGTCGTTATTACACCAGTGTACAAATCCTG
TCAGGCAAATCATATATTAAGTTTCAGATTCACAGATGGTTAAAATTGAT
GATGAATTTCCTCCATTACTCTGGGTATCATCCTTCTACACTGACAAAGC
TAGCCATCAGAGATGAAGTTTCCAAGTGATTACTGGCTTGATTTCTCCAT
GTTCTTTGTATCTAGAATAGGGTTCTTTGCCATGGGGGCTTTCATAGAGG
AATTTTAATCCAGCAATGTGGATCTTCTGGCAAGAGATCATATCCAAGGA
CCTTCTGTGTGATCTGGCTGGAATGGAGACACATCCCACACCCTTAATGT
CTCTGGCAGGAATAAAGGTGTGGCTTTAGTATACACCTTTAGCCCCACCC
ACCCCCCAAAAAACCAAACAAACAAACAATGTAGGTAAGTTTATTATGTA
GAAGGATTCAGCCATGTTTGAAAGTGACATATAATTGAGAGATAGACAAA
CTGATGAATCAGTGAATGATTTGACAGAATGATTTAGAGATAGGAAATGC
CCAACTCTCATAAGGACAGACAGAAAAGAGAGGTGACAACAGTGCAGATT
GGGAGGAGCAGGTTTATCTATCTATCTATCTAT

TTATTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACCTTTCCACCCAGAGAGAGTAA
TGCCTTTTCAAATGGGAGTGGAGAAAAAATAAAAATTGCTGGCAAGTGCG
GGGGTGGTAAGGTGGTGGTGAACTGATTAAAAGCTGCTTCAGCGTGGTGT
TAGTGTAGTGATATAAGGATTACTTAATATAGTTTTGCATACCCTTATCA
TGAGCACAAGAAGGGATATGAACATTTTATCTTCACATAAAATAGCTTAC
AAAACTGCAGAACAAGAGACAATTATCAGTGGTAGTAGACTGCCTTCTAG
GTAAAAATGACTTATTAAGAAATCCTCTCAATATTTTTATAATTAATGCC
CCATTTAATAGTTTTCAAAACCCTTTTCCAGACTTAATACAAGACCTATC
ATATAGAAGTTTTAATGTACTTATTTAAATTAAGAAAAAAAAACCTTACA
GATAAAACCCATGAATGCTAATTACAGGTTAGTAAAAAGTGTCATGATTT
TCATTCTCTGTGCTGTTCAGCTTGTAAACTTTCTTGGGAATGAATAGTAA
AAGTGTTTAAAAGCTAATCGCTTAAAAAGTCCATGTGAGAAATAGAAATA
CATTTAAAGAAGATGTAAATCTTTAAACAGTGAAGCCTACTTCAGTTGTA
CTTTGACATTCAGCATCTGCTTCTCAGGCAAAAGGTTTGA

Query= MSMg01no542_i22.g1 MSMg01no542_i22.g1 CHROMAT_FILE:
MSMg01no542_i22.g1 PHD_FILE: MSMg01no542_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:38 2005
         (661 letters)



>mm_chr16_66118016_66119078
          Length = 1063

 Score = 1158 bits (599), Expect = 0.0
 Identities = 647/663 (97%), Gaps = 2/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acctttccacccagagagagtaatgccttttc-aaatgggagtggagaaaaaataaaaat 59
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 acctttccacccagagagagtaatgccttttcaaaatgggagtggagaaaaaataaaaat 260

                                                                       
Query: 60  tgctggcaagtgcgggggtggtaaggtggtggtgaactgattaaaagctgcttcagcgtg 119
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctggcaagtgcgggggtggtagggtggtggtgaactgattaaaagctgcttcagcgtg 320

                                                                       
Query: 120 gtgttagtgtagtgatataaggattacttaatatagttttgcatacccttatcatgagca 179
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gtgttagtgtagtgatataaggattacttaatatagttttgcatagccttatcatgagca 380

                                                                       
Query: 180 caagaagggatatgaacattttatcttcacataaaatagcttacaaaactgcagaacaag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaagggatatgaacattttatcttcacataaaatagcttacaaaactgcagaacaag 440

                                                                       
Query: 240 agacaattatcagtggtagtagactgccttctaggtaaaaatgacttattaagaaatcct 299
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 agacagttatcagtggtagtagactgccttctaggcaaaaatgacttattaagaaatcct 500

                                                                       
Query: 300 ctcaatatttttataattaatgccccatttaatagttttcaaaacccttttccagactta 359
           |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 501 ctcaatatttttataattaatgccccatttaatagtttccaaaaccctttcccagactta 560

                                                                       
Query: 360 atacaagacctatcatatagaagttttaatgtacttatttaaattaagaaaaaaaaa-cc 418
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 acacaagacctatcatatagaagttttaatgtacttatttaaattaagaaaaaaaaaacc 620

                                                                       
Query: 419 ttacagataaaacccatgaatgctaattacaggttagtaaaaagtgtcatgattttcatt 478
           |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||
Sbjct: 621 ttacagataaaacccatgaatgctaattacagattagtaaaaattgtgatgattttcatt 680

                                                                       
Query: 479 ctctgtgctgttcagcttgtaaactttcttgggaatgaatagtaaaagtgtttaaaagct 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctgtgctgttcagcttgtaaactttcttgggaatgaatagtaaaagtgtttaaaagct 740

                                                                       
Query: 539 aatcgcttaaaaagtccatgtgagaaatagaaatacatttaaagaagatgtaaatcttta 598
           |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 741 aatcgcttaaaaagtccatgtgagaaatagaaatgcatttaaataagatgtaaatcttta 800

                                                                       
Query: 599 aacagtgaagcctacttcagttgtactttgacattcagcatctgcttctcaggcaaaagg 658
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 801 aacattgaagcctacttcagttgtactttgacattcagcatctgcttctcaggcaaaatg 860

              
Query: 659 ttt 661
           |||
Sbjct: 861 ttt 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1063
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1053
Effective search space:   685503
Effective search space used:   685503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)