Query= MSMg01no544_k15.b1 MSMg01no544_k15.b1 CHROMAT_FILE:
MSMg01no544_k15.b1 PHD_FILE: MSMg01no544_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:24 2005
(569 letters)
>mm_chr16_61989320_61990286
Length = 967
Score = 992 bits (513), Expect = 0.0
Identities = 551/566 (97%), Gaps = 8/566 (1%)
Strand = Plus / Plus
Query: 4 ggaattctttctgattcattttgctgaaaaaacgccccttacgtatactgaataatgcaa 63
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 204 ggaattctttctgattcattttgctgaaaaaatgcccctgacgtatactgaataatgcaa 263
Query: 64 tgttagtgtaaatatgagagaaaaatgatcatctgtatttacaattcatgaaataataga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttagtgtaaatatgagagaaaaatgatcatctgtatttacaattcatgaaataataga 323
Query: 124 ggcaatatcaaataaatgacttctcaaatgtttgtgacaacccaatattatacaggcagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggcaatatcaaataaatgacttctcaaatgtttgtgacaacccaatattatacaggcagt 383
Query: 184 ttgaaggaagtttttgattagtaataattgggtcttgagaatagcaaaaatagcatgtat 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgaaggaagtttttgattaataataattgggtcttgagaatagcaaaaatagcatgtat 443
Query: 244 cagaggtcactgcaacagcgaactccctggaagaaaattaaatacagccaagcatctgcc 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 cagaggtcactgcaacagcgaactcccaggaagaaaattaaatacagccaagcatctgcc 503
Query: 304 cacacaatttaccgcctgccaatctatagaagaaactttttcccacagattcctgtaaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cacacaatttaccgcctgccaatctatagaagaaactttttcccacagattcctgtaaag 563
Query: 364 tcatctggctgtagcttacttttctatagtgcatcaggcttaatcttgaaaacacagaac 423
||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 564 tcatctgactgtagctta-ttttctatagtgcatcaggcttaatcttgaaaacacggaac 622
Query: 424 ctggcacctctttaatccttgtaacagacctgggaaaacaacctcaaaaaacaaaaaaga 483
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 ctggcacctctttaatccttgtaacagacctgggaaaacaacctcaaaaa-caaaaaaga 681
Query: 484 ttgtttgtttgtttgtttgcttgcttgcttantgtgtgtgtgtgtgtgtgtgtgtgtgtg 543
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 682 ttgtttgtttgtttgtttgcttgcttgcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtg 741
Query: 544 tattgtgtgggtgtgatgtattgtgt 569
| ||||| |||| ||||||||||
Sbjct: 742 t---gtgtg--tgtg-tgtattgtgt 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 967
Length adjustment: 10
Effective length of query: 559
Effective length of database: 957
Effective search space: 534963
Effective search space used: 534963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_k15.g1 MSMg01no544_k15.g1 CHROMAT_FILE:
MSMg01no544_k15.g1 PHD_FILE: MSMg01no544_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:24 2005
(613 letters)
>mm_chr16_62000915_62001927
Length = 1013
Score = 725 bits (375), Expect = 0.0
Identities = 449/515 (87%), Gaps = 64/515 (12%)
Strand = Plus / Minus
Query: 1 atgtttgtaatgcatatgtgttaaaagctggttctcagagtgacactattgcatgacagt 60
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 451 atgtttgtaatgcacatgtgttaaaagctggttctcagagcgacactattgcatgacagt 392
Query: 61 agaagttttatgatatggaactcaagaggtttctgataggctgttgcagttgaactctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agaagttttatgatatggaactcaagaggtttctgataggctgttgcagttgaactctag 332
Query: 121 aagaagcactcatccatacccattgttttgatttgttttctctgcttccacatttgactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aagaagcactcatccatacccattgttttgatttgttttctctgcttccacatttgactg 272
Query: 181 cctacattgatatgcttttcccaacagaatatcatcatatcttctctcaaaaatgctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cctacattgatatgcttttcccaacagaatatcatcatatcttctctcaaaaatgctcaa 212
Query: 241 aacaatagagttgttcttgtcagggttctctagagaagcagaaattattgcatgcatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aacaatagagttgttcttgtcagggttctctagagaagcagaaattattgcatgcatagg 152
Query: 301 gtgtttatatttattttattttactttattttattttatttattttattttattttattt 360
||||||| ||||||||||||||||||||||||
Sbjct: 151 gtgttta-----------------------------tatttattttattttattttattt 121
Query: 361 tattttattttattttattttattttattttattttatgttattttattttattttatgt 420
|||| |||||||||||||||||||||
Sbjct: 120 tatt-----------------------------------ttattttattttattttatgt 96
Query: 421 tattttattttttgagacagggtttctctgtgtagccctggatgtcctggaactcactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tattttattttttgagacagggtttctctgtgtagccctggatgtcctggaactcactct 36
Query: 481 gtagaccaggctgtcctcaaactaagaaatccacc 515
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gtagaccaggctgtcctcaaactaagaaatccacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
