Query= MSMg01no545_c15.b1 MSMg01no545_c15.b1 CHROMAT_FILE:
MSMg01no545_c15.b1 PHD_FILE: MSMg01no545_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(681 letters)
>mm_chr16_37648428_37649506
Length = 1079
Score = 1191 bits (616), Expect = 0.0
Identities = 662/678 (97%), Gaps = 4/678 (0%)
Strand = Plus / Minus
Query: 5 gaattctccctcagcatggcctccttaaggttgacgagtctgtgtttgtgttcctttcag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gaattctccctcagcgtggcctccttaaggttgacgagtctgtgtttgtgttcctttcag 820
Query: 65 gaggatcctgccttgattcgctggacctatgcaagatcggcaaatatttatcctaatttt 124
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 819 gaggatcctgccttgattcgctggacctatgcaagatcagcaaatatttatcctaatttc 760
Query: 125 aggcccactcccaagaactcacttttaggagctgtggcagggtttgggcccctcatcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aggcccactcccaagaactcacttttaggagctgtggcagggtttgggcccctcatcttc 700
Query: 185 tggtattatgttttcaaaacagacagggtaagtattagggctagatgtttagctggtttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tggtattatgttttcaaaacagacagggtaagtattagggctagatgtttagctggtttg 640
Query: 245 agaagtctctcctaggtgcccccagcagttcctagtggtgatggcttccagtgtctcttt 304
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 639 agaagtccctcctaggtgcccccagcagttcctagtggtgatggctcccagtgtctcttt 580
Query: 305 tggttacatgtctttattcctttctcggaagagttggaattttcatttgatttgatactt 364
|||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 579 tggtcacatgtctttattcctttctcggaaaagttggagttttcatttgatttgatactt 520
Query: 365 tgttttaaaaaaatcaacaacatggcagcctatgggtctttcaggtttaatttaatggtg 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 519 tgttttaaaaaaatcaacaacatggcagcctatggctctttcaggtttaatttaatggtg 460
Query: 425 actttgcagtttaaaaaaagtaacaaaagggtcagtttaaatttatgagagtagaattca 484
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 459 actttgcagtttataaaaagtaacagaagggtcagtttaaatttatgagagtagagttca 400
Query: 485 gttcatgagtcttcctggg-tttttttcccagataatatgagaaattgtaatgtgatgat 543
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gttcatgagtcttcctgggttttttttcccagataatatgagaaattgtaatgtgatgat 340
Query: 544 taagcaagtaaataccgtaacaactttttaaaagttaattttctcattagagggtatata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 taagcaagtaaataccgtaacaactttttaaaagttaattttctcattagagggtatata 280
Query: 604 gaaacttgattttactaagacaggattaagaagatctccctatgtcacccaggccagtct 663
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 279 gaaacttgattttactaagacaggatt--g-agatctccctatgtcacccaggccagtct 223
Query: 664 caaatttccagcctcctg 681
||||||||||||||||||
Sbjct: 222 caaatttccagcctcctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1079
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1069
Effective search space: 717299
Effective search space used: 717299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_c15.g1 MSMg01no545_c15.g1 CHROMAT_FILE:
MSMg01no545_c15.g1 PHD_FILE: MSMg01no545_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(568 letters)
>mm_chr16_37479300_37480267
Length = 968
Score = 1052 bits (544), Expect = 0.0
Identities = 562/568 (98%)
Strand = Plus / Plus
Query: 1 attaaaaaggattttgtgtcctactatataaaaaccagtcccaaaaggctcctttgcgtt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 attaaaaaggattttgtgtcctactatataaaaaccagtcccaaatggctcctttgcgtt 260
Query: 61 catgtttctctactagggttttttattctcacaaaaccccttcatattaggctacttgtc 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgtttttctactagggttttttattctcacaaaaccccttcatattaggctacttgtc 320
Query: 121 cacttccattctccctcagtcttcaaatactttcacatgtttatgggcatgggactactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttccattctccctcagtcttcaaatactttcacatgtttatgggcatgggactactt 380
Query: 181 agattgcaaaagatttttgagtactgtctgccttagggtttctattgctgtgataaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattgcaaaagatttttgagtactgtctgccttagggtttctattgctgtgataaaaca 440
Query: 241 ccatggccaaaaataacttcagaaggaaatgttttatttcatttacacttttaggtacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccatggccaaaaataacttcagaaggaaatgttttatttcatttacacttttaggtacca 500
Query: 301 gaccagcattaaagggaagtcagggcaggaactcaagcagggcagtaacttataggcagg 360
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 gaccagcattgaagggaagtcagggcaggaactcaagcagggcagtaacttagaggcagg 560
Query: 361 agccgatgcagaggccatggagaattactgtttactggcttgctcatcatggcttgcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccgatgcagaggccatggagaattactgtttactggcttgctcatcatggcttgcaca 620
Query: 421 gcctgttttcttatagcacccaggacatcagctcaagggtggcaacacccaccatggggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctgttttcttatagcacccaggacatcagctcaagggtggcaacacccaccatggggt 680
Query: 481 ggacactcccacatcaatcactaatttaaaaaatgccctacaggctagggtacagcttga 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 ggacactcccacatcaatcactaatttaaaaaatgccctacaggctaggttacagcttga 740
Query: 541 tctcatagaggcatttccccaatttctc 568
||||||||||| ||||||||||||||||
Sbjct: 741 tctcatagaggtatttccccaatttctc 768
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
