Query= MSMg01no545_d04.b1 MSMg01no545_d04.b1 CHROMAT_FILE:
MSMg01no545_d04.b1 PHD_FILE: MSMg01no545_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:06 2005
(704 letters)
>mm_chr16_40086035_40087138
Length = 1104
Score = 1332 bits (689), Expect = 0.0
Identities = 697/700 (99%)
Strand = Plus / Plus
Query: 5 gaattcagggactcacacttgtacagtaagcaatttgccaacgtttctgtctccccagcc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcagggactcacacttgtacagtaagcaatttgccaacgtttctgtctgcccagcc 264
Query: 65 tcctccattatgcatttttattctttcatctttaaacttggaattagagtgttcctttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctccattatgcatttttattctttcatctttaaacttggaattagagtgttcctttgg 324
Query: 125 tagttcatgctttagtttttgtacgccagcaacctcctaggggagcttcaatccattctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagttcatgctttagtttttgtacgccagcaacctcctaggggagcttcaatccattctt 384
Query: 185 catgctggctataggtttggtacactacacaatatatttcccttcaatggcacctaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catgctggctataggtttggtacactacacaatatatttcccttcaatggcacctaaata 444
Query: 245 attaattaaatgctaatattgcttttcttcttaacaattggtcttaagtgctaaatcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attaattaaatgctaatattgcttttcttcttaacaattggtcttaagtgctaaatcaat 504
Query: 305 cacagattaattgaaacttcctcactagtttctcttttctctccataaattagcttttcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacagattaattgaaacttcctcactagtttctcttttctctccataaattagcttttcc 564
Query: 365 tttcattttctttcctggacctttttccccttctcttcaggcattctcagagggcatcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttcattttctttcctggacctttttccccttctcttcaggcattctcagagggcatcta 624
Query: 425 acattcgttgcttctgtagttttgaagtatgcaatttggaaggaatgtgagtctggaggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acattcgttgcttctgtagttttgaagtatgcaatttggaaggaatgtgagtctggaggg 684
Query: 485 aattaaattaactagaagtactctgatttttgattaaattgcttcttttaaagatattat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aattaaattaactagaagtactctgatttttgattaaattgcttcttttaaagatattat 744
Query: 545 ggagcattccaggtattcattttaaaattttcttccnaaaataaaaaaataaaataaaat 604
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 ggagcattccaggtattcattttaaaattttcttccaaaaataaaaaaataaaataaaat 804
Query: 605 aaaaataaaaaagagagaaggagagagagacattaaagttcaaacaactcccattccttt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaaaataaaaaagagagaaggagagagagacattaaagttcaaacaactcccattccttt 864
Query: 665 tctgtattacatttaaggtccacattcaaaatacctttat 704
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 865 tctgtattacatttaaggtccacactcaaaatacctttat 904
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no545_d04.g1 MSMg01no545_d04.g1 CHROMAT_FILE:
MSMg01no545_d04.g1 PHD_FILE: MSMg01no545_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:07 2005
(662 letters)
>mm_chr16_40220360_40221421
Length = 1062
Score = 1253 bits (648), Expect = 0.0
Identities = 658/662 (99%), Gaps = 2/662 (0%)
Strand = Plus / Minus
Query: 1 aactggtagatgcttcaatcaacttcctaaacctgatgttagaggcatcccgtacttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aactggtagatgcttcaatcaacttcctaaacctgatgttagaggcatcccgtacttgag 650
Query: 61 ggactaccaccatttctgtgtacatgtttccctcttagaacatgaatatttaagctttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggactaccaccatttctgtgtacatgtttccctcttagaacatgaatatttaagctttga 590
Query: 121 acctttcattaaagagatcttttccacatatttgagaaaacataaatcatagaaagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 acctttcattaaagagatcttttccacatatttgagaaaacataaatcatagaaagggaa 530
Query: 181 gttatattatctggcatttagccaaaagattaattctcagatgtgacagatgataaaaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 529 gttatattatctggcatttagccaaaagattaattctcagatgtgacagatgatgaaaag 470
Query: 241 taaaatggactcagtcctccaacatttccttcatgagaattctatgtgataaatgtgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taaaatggactcagtcctccaacatttccttcatgagaattctatgtgataaatgtgata 410
Query: 301 tttggcatgaaattcatcaacattttcaggactaaaaacaaattactgtattgtgtgtca 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 409 tttggcatgaaattcatcaacatcttcaggactaaaaacaaattactgtattgtgtgtca 350
Query: 361 tgtagttactgaagaaaactgaaaaatcattgaaaatatttttgcactcatggtaaatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgtagttactgaagaaaactgaaaaatcattgaaaatatttttgcactcatggtaaatag 290
Query: 421 gaaagtgaaactttaaacccaggtaagtagcaactcaaagtcaccatctaattttagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaaagtgaaactttaaacccaggtaagtagcaactcaaagtcaccatctaattttagaaa 230
Query: 481 tacttttacatttatacaaacaatcctctttccccaaagtatccatgtgtgtgtaatata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tacttttacatttatacaaacaatcctctttccccaaagtatccatgtgtgtgtaatata 170
Query: 541 tacatatgtgtctatacatatatatgcatatgtatatatatatatatgtatatatacaca 600
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 169 tacatatgtgtctatacatatatatgcatatgtatatatatatat--gtatatatacaca 112
Query: 601 tatacatatatgtatatatgtatgtgtgtatctatatatctatatctatatattacacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tatacatatatgtatatatgtatgtgtgtatctatatatctatatctatatattacacac 52
Query: 661 ac 662
||
Sbjct: 51 ac 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
