Query= MSMg01no545_j05.b1 MSMg01no545_j05.b1 CHROMAT_FILE:
MSMg01no545_j05.b1 PHD_FILE: MSMg01no545_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:35 2005
(660 letters)
>mm_chr16_39748317_39749374
Length = 1058
Score = 1243 bits (643), Expect = 0.0
Identities = 653/657 (99%), Gaps = 2/657 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactggtggcgaaaatttgggaccagactataaaaagagattccgctctctata 63
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 204 ggaattcactggtggggaaaatttgggaccagactataaaaacagattccgctctctata 263
Query: 64 aaatcttacacatttccatgtgaagattgtgctcttttattattataagtttaataaatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaatcttacacatttccatgtgaagattgtgctcttttattattataagtttaataaatt 323
Query: 124 tatttgcaaagactttgtgtgtttcatgtaactcttatccagttctttatcataatttca 183
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatttgcaaagactttgtgt--ttcatgtaactcttatccagttctttatcataatttca 381
Query: 184 tttcattattcactctctggagcatgtagtctgaatgtttcattctccactttagacatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttcattattcactctctggagcatgtagtctgaatgtttcattctccactttagacatc 441
Query: 244 ctacagctttttgtgttaccagggtactttaaaaatcattttaaatggtagacactttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctacagctttttgtgttaccagggtactttaaaaatcattttaaatggtagacactttta 501
Query: 304 ttgttttataatgtttttctatttattttttacagtccttgtcaaatatgtgatttttaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgttttataatgtttttctatttattttttacagtccttgtcaaatatgtgatttttaa 561
Query: 364 aagataaagcactagcttcattgagagtttcatctgtgaatacaatgcatttgatcatat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aagataaagcactagcttcattgagagtttcatctgtgaatacaatgcatttgatcatat 621
Query: 424 tgactccctattttccccagctcctccaatatctccattctctcccacctcccaatgcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgactccctattttccccagctcctccaatatctccattctctcccacctcccaatgcct 681
Query: 484 tgttccaccccccacacatacacacatttttgtctcagcaaatccaatgtatgctttcca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgttccaccccccacacatacacacatttttgtctcagcaaatccaatgtatgctttcca 741
Query: 544 agcagtcacagatatgaggctaagtattgaaacttgggcaacctatcagggaccacaccc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agcagtcacagatatgaggctaagtattgaaacttgggcaacctatcagggaccacaccc 801
Query: 604 ataatgaaaacaaactgtcctattcttggaaacccttaactataaattgctcctcag 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ataatgaaaacaaactgtcctattcttggaaacccttaactataaattgctcctcag 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1058
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1048
Effective search space: 681200
Effective search space used: 681200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_j05.g1 MSMg01no545_j05.g1 CHROMAT_FILE:
MSMg01no545_j05.g1 PHD_FILE: MSMg01no545_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:35 2005
(670 letters)
>mm_chr16_39901905_39902974
Length = 1070
Score = 1255 bits (649), Expect = 0.0
Identities = 664/669 (99%)
Strand = Plus / Minus
Query: 1 tttatttattactattttgtttttacattttaaagttaaacggatgtctatatgagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tttatttattactattttgtttttacattttaaagttaaacggatgtctatatgagcaca 810
Query: 61 ttcacttttatctgcaagggaagctaccaagaaaggtgttgcaagctgagaagaattggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ttcacttttatctgcaagggaagctaccaagaaaggtgttgcaagctgagaagaattggg 750
Query: 121 aagctacaagcaaagtataaccttaaattaaattcttccatgcttgtcctaatgagtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aagctacaagcaaagtataaccttaaattaaattcttccatgcttgtcctaatgagtgca 690
Query: 181 actccctccccatactttagtattcagcaccaccaggaaatctcactgtggcttgctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 actccctccccatactttagtattcagcaccaccaggaaatctcactgtggcttgctctt 630
Query: 241 tgggaaataaaaaagagcttacccttttctgatctttcatgaacatttttaaatatgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgggaaataaaaaagagcttacccttttctgatctttcatgaacatttttaaatatgtgc 570
Query: 301 atacatttacaaagttaagacacgaaggacataacaataaattcatcacgagtatcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atacatttacaaagttaagacacgaaggacataacaataaattcatcacgagtatcatat 510
Query: 361 tttttggaaaaaaatgtgttagctactatgtaagacactatctgaaaaaggaagggagta 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 509 tttttggaaaaaaatgtgttagctattatgtaagacactatctgaaaaaggaagggagta 450
Query: 421 gccatctatgaaggagagccacttaatattctttcgtttttaatttcccccatattcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gccatctatgaaggagagccacttaatattctttcgtttttaatttcccccatattcatt 390
Query: 481 gtccttctctccaaatatgaatgactaaatatatgtatatatattcacacatacacaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 389 gtccttctctccaaatatgaatgactaaatatatgtatatatattcacatatacataaat 330
Query: 541 atgtttataaatacacctttgggtatacacccataacaatatttctttccagatatattt 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgtttataaatacacctgtgggtatacacccataacaatatttctttccagatatattt 270
Query: 601 tactctttagtttttgttctaaattcaggtgaataaaaaccaacattgagatactgcaaa 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tactgtttagtttttgttctaaattcaggtgaataaaaaccaacattgagatactgcaaa 210
Query: 661 cttataatg 669
|||||||||
Sbjct: 209 cttataatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
