Query= MSMg01no547_h10.b1 MSMg01no547_h10.b1 CHROMAT_FILE:
MSMg01no547_h10.b1 PHD_FILE: MSMg01no547_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:06 2005
(708 letters)
>mm_chr16_10146524_10147631
Length = 1108
Score = 824 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Minus
Query: 275 gcttgctttgcaacataatctagctgaatgaaaggatgggtctgtggtctctccctatat 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 gcttgctttgcaacataatctagctgaatgaaaggatgggtctgtggtctctccctatat 1049
Query: 335 aaacacagtgctgaatattaaacttggagccttgatcagaaccttgtcttgacttcatcc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 aaacacagtgctgaatattaaacttggagccttgatcagaaccttgtcttgacttcatcc 989
Query: 395 ttctctcaccccacatccttttcatttccagcccccctttcaggtaaacccagttcatcc 454
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 ttctctcaccccccatccttttcatttccagcccccctttcaggtaaacccagttcatcc 929
Query: 455 atggccgctggatggctatacctcagccttaatactctaagataaaaattacaaggctct 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 atggccgctggatggctatacctcagccttaatactctaagataaaaattacaaggctct 869
Query: 515 gtggatagcaatagatgcaggtatatagagggaatgtcagttaattagtccctccagacc 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gtggatagcaatagatgcaggtatatagagggaatgtcagttaattagtccctccagacc 809
Query: 575 acaatataggacacctgatcaagatgggcaggagactcagccctgaagacttttcgctgg 634
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 acaatatagggcacctgatcaagatgggcaggagactcagccctgaagacttttcgctgg 749
Query: 635 atggccacaactccagagaggtcaaaggtcccttcctgaagccacccaacttcgaaggtg 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 atggccacaactccagagaggtcaaaggtcccttcctgaagccacccaacttcgaaggtg 689
Query: 695 ggccattctgatga 708
||||||||||||||
Sbjct: 688 ggccattctgatga 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space: 766404
Effective search space used: 766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no547_h10.g1 MSMg01no547_h10.g1 CHROMAT_FILE:
MSMg01no547_h10.g1 PHD_FILE: MSMg01no547_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:06 2005
(691 letters)
>mm_chr16_9968755_9969842
Length = 1088
Score = 1278 bits (661), Expect = 0.0
Identities = 683/693 (98%), Gaps = 7/693 (1%)
Strand = Plus / Plus
Query: 1 catagaatccccggggggcggagctatcctt-aagtgccgaggtaaagggggaagcaagg 59
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 catagaatccccggggggcggagctatcctttaagtgccgaggtaaagggggaagcaagg 260
Query: 60 tcacctcttcctcaccatgtcggctcccactgagacccgctcaaacactggtaccagtgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacctcttcctcaccatgtcggctcccactgagacccgctcaaacactggtaccagtgt 320
Query: 120 aggataaagacttcccacggagtgtgaactggcatgactgtttcacaggaggagttagta 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 aggataaagacttcccacggagtgtgaactggcatgactgtttcacagggggagttagta 380
Query: 180 acatcattcctgctccactggaaaagacccctcaactctgaattcctgaagaaaggtgaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 acatcattcctgctccactggaaaagacccctcaactctgaattcctgaagagaggtgaa 440
Query: 240 ggacaggtgctgagctgtctccagggactcactgggcagctcaagtctgaggagtagact 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 441 ggacaggtgctgagctgtctccagggactctctgggcagctcaagtctgagga-----ct 495
Query: 300 ctacattaatgattatgcttgaaaaagttccatatattcctgataggtaacagcaatatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctacattaatgattatgcttgaaaaagttccatatattcctgataggtaacagcaatatt 555
Query: 360 ctctggtgaatgaaggaggtgaggatgtgagagacatatgccctgccctcatagtccaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctctggtgaatgaaggaggtgaggatgtgagagacatatgccctgccctcatagtccaga 615
Query: 420 aactgcaggagaaatgacagctgagcatggccattacccagttaataatcacaggacctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aactgcaggagaaatgacagctgagcatggccattacccagttaataatcacaggacctt 675
Query: 480 ctcacatgcaatgacaaactcctgccccccagcaaagatcaagcccactgaactcccctg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ctcacatgcaatgacaaactcctgccccccagcaaagatcaagcccactgaactcccctg 735
Query: 540 ctcttcccccactgggttacccagggatgaggcaggtttgataccagattaccaaagggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ctcttcccccactgggttacccagggatgaggcaggtttgataccagattaccaaagggg 795
Query: 600 gaaaaaaac-agttttgtgatccattcactcagcacaatggctcccaagcatctaagaga 658
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gaaaaaaaccagttttgtgatccattcactcagcacaatggctcccaagcatctaagaga 855
Query: 659 atactatgcatgatgttaatgaccagaaaggag 691
|||||||||||||||||||||||||||||||||
Sbjct: 856 atactatgcatgatgttaatgaccagaaaggag 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1088
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1078
Effective search space: 734118
Effective search space used: 734118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
