MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-548E01
Chromosome	16 (Build37)
Map Location	39,171,921 - 39,172,257
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gsk3b, Nr1i2, 4932425I24Rik, Cox17, LOC100043715, Popdc2, Pla1a, Adprh, Cd80, LOC667353, Ck-ps3, 4930455C21Rik, 9630046K23Rik, Tmem39a, Cdgap, B4galt4, LOC100043289, Upk1b, 4930435E12Rik, Igsf11
Downstream gene	LOC667400
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gsk3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56637 MGI:1861437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr1i2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18171 MGI:1337040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932425I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320214 MGI:2443598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cox17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12856 MGI:1333806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Popdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64082 MGI:1930150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pla1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:85031 MGI:1934677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adprh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11544 MGI:1098234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd80 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12519 MGI:101775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins pseudo : _no_value

name	Ck-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12708 MGI:88406
definition	note : creatine kinase pseudogene 3 pseudo : _no_value

name	4930455C21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76916 MGI:1922139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630046K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224143 MGI:2444232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem39a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67846 MGI:1915096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdgap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12549 MGI:1333857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B4galt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56375 MGI:1928387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043289 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043289
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Upk1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22268 MGI:98912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930435E12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74663 MGI:1921913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein

name	Igsf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207683 MGI:2388477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Gsk3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802072 GeneID:56637 MGI:1861437
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycogen synthase kinase 3 beta transcript_id : NM_019827.4

name	Nr1i2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363671 GeneID:18171 MGI:1337040
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 1, group I, member 2 transcript_id : NM_010936.2

name	4932425I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486623 GeneID:320214 MGI:2443598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932425I24 gene transcript_id : NM_001081025.1

name	Cox17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816953 GeneID:12856 MGI:1333806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c oxidase, subunit XVII assembly protein homolog (yeast) transcript_id : NM_001017429.2

name	LOC100043715 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267535 GeneID:100043715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043715 transcript_id : XM_001481074.1

name	Popdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126517507 GeneID:64082 MGI:1930150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : popeye domain containing 2 transcript_id : NM_001081984.1

name	Popdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126517506 GeneID:64082 MGI:1930150
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : popeye domain containing 2 transcript_id : NM_022318.2

name	Pla1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801864 GeneID:85031 MGI:1934677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A1 member A transcript_id : NM_134102.3

name	Adprh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87252722 GeneID:11544 MGI:1098234
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylarginine hydrolase transcript_id : NM_007414.3

name	Cd80 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038144 GeneID:12519 MGI:101775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD80 antigen transcript_id : NM_009855.2

name	4930455C21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13357215 GeneID:76916 MGI:1922139
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930455C21 gene transcript_id : NM_024273.1

name	9630046K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802439 GeneID:224143 MGI:2444232
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630046K23 gene transcript_id : NM_172380.2

name	Tmem39a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754068 GeneID:67846 MGI:1915096
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 39a transcript_id : NM_026407.2

name	Cdgap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55770847 GeneID:12549 MGI:1333857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Cdc42 GTPase-activating protein transcript_id : NM_020260.2

name	B4galt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344191 GeneID:56375 MGI:1928387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 transcript_id : NM_019804.2

name	Upk1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384775 GeneID:22268 MGI:98912
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uroplakin 1B transcript_id : NM_178924.3

name	4930435E12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400187 GeneID:74663 MGI:1921913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein product : RIKEN cDNA 4930435E12 gene transcript_id : XM_156106.6

name	Igsf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254204 GeneID:207683 MGI:2388477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : immunoglobulin superfamily, member 11 transcript_id : NM_170599.2

name	Gsk3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790077 CCDS:CCDS28163.1 GeneID:56637 MGI:1861437
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008013 - beta-catenin binding [Evidence IPI]; GO:0004696 - glycogen synthase kinase 3 activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0050321 - tau-protein kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0008283 - cell proliferation [Evidence TAS]; GO:0045444 - fat cell differentiation [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006611 - protein export from nucleus [Evidence IDA]; GO:0000320 - re-entry into mitotic cell cycle [Evidence IDA]; GO:0006950 - response to stress [Evidence IDA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] [Evidence IGI] codon_start : 1 product : glycogen synthase kinase 3 beta protein_id : NP_062801.1

name	Nr1i2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468913 CCDS:CCDS28164.1 GeneID:18171 MGI:1337040
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Pregnane X receptor product : nuclear receptor subfamily 1, group I, member 2 protein_id : NP_035066.1

name	4932425I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486624 GeneID:320214 MGI:2443598
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320214 protein_id : NP_001074494.1

name	Cox17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62945234 CCDS:CCDS28165.1 GeneID:12856 MGI:1333806
definition	GO_component : GO:0005758 - mitochondrial intermembrane space [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0016531 - copper chaperone activity [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IDA]; GO:0008047 - enzyme activator activity [Evidence IMP]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006825 - copper ion transport [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : cytochrome c oxidase assembly protein product : cytochrome c oxidase subunit XVII assembly protein homolog protein_id : NP_001017429.1

name	LOC100043715 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267536 GeneID:100043715
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481124.1

name	Popdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612497 GeneID:64082 MGI:1930150
definition	GO_component : GO:0016020 - membrane [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; popeye protein 2; popeye 2 product : popeye domain containing 2 isoform 2 protein_id : NP_071713.1

name	Popdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126517508 GeneID:64082 MGI:1930150
definition	GO_component : GO:0016020 - membrane [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; popeye protein 2; popeye 2 product : popeye domain containing 2 isoform 1 protein_id : NP_001075453.1

name	Pla1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982575 CCDS:CCDS28166.1 GeneID:85031 MGI:1934677
definition	codon_start : 1 exception : mismatches in translation note : phosphatidylserine-specific phospholipase A1 product : phospholipase A1 member A protein_id : NP_598863.2

name	Adprh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680658 CCDS:CCDS28167.1 GeneID:11544 MGI:1098234
definition	GO_function : GO:0003875 - ADP-ribosylarginine hydrolase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006471 - protein amino acid ADP-ribosylation [Evidence IEA] codon_start : 1 product : ADP-ribosylarginine hydrolase protein_id : NP_031440.1

name	Cd80 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983684 CCDS:CCDS28168.1 GeneID:12519 MGI:101775
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0050798 - activated T cell proliferation [Evidence IDA] codon_start : 1 note : B7 protein product : CD80 antigen precursor protein_id : NP_033985.3

name	4930455C21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13357216 CCDS:CCDS28169.1 GeneID:76916 MGI:1922139
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC76916 protein_id : NP_077235.1

name	9630046K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369505 CCDS:CCDS28170.1 GeneID:224143 MGI:2444232
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 product : RIKEN cDNA 9630046K23 protein_id : NP_759012.1

name	Tmem39a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754069 CCDS:CCDS28171.1 GeneID:67846 MGI:1915096
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 39a protein_id : NP_080683.2

name	Cdgap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55770848 CCDS:CCDS28172.1 GeneID:12549 MGI:1333857
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017124 - SH3 domain binding [Evidence IDA] GO_process : GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] codon_start : 1 product : Cdc42 GTPase-activating protein protein_id : NP_064656.2

name	B4galt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789889 CCDS:CCDS28173.1 GeneID:56375 MGI:1928387
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003945 - N-acetyllactosamine synthase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : beta-1,4-galactosyltransferase IV product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 protein_id : NP_062778.1

name	Upk1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725788 CCDS:CCDS28174.1 GeneID:22268 MGI:98912
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : uroplakin 1B protein_id : NP_849255.1

name	4930435E12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28493910 GeneID:74663 MGI:1921913
definition	codon_start : 1 product : hypothetical protein LOC74663 protein_id : XP_156106.2

name	Igsf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254205 CCDS:CCDS28175.1 GeneID:207683 MGI:2388477
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] codon_start : 1 note : immunoglobulin superfamily, member 13 product : immunoglobulin superfamily, member 11 protein_id : NP_733548.2

name	LOC100043289 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043289
definition	number : 2 pseudo : _no_value

name	LOC100043289 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043289
definition	number : 1 pseudo : _no_value

name	LOC667400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667400
definition	number : 1 pseudo : _no_value

name	Ck-ps3 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : region homologous with murine creatine kinase B exon pseudo : _no_value

name	LOC667353 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267403 GeneID:667353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 5 Proteins product : similar to SET domain-containing protein pseudo : _no_value transcript_id : XR_034433.1

clone name	MSMg01-462F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-151A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-548E01.T7 (MSMg01no548_e01.b1)	MSMg01-548E01.TJ (MSMg01no548_e01.g1)
ACC	AG612644	AG612645
length	959	758
length of high quality (start - end)	---	337 (76 - 412)
definition	CHROMAT_FILE: MSMg01no548_e01.b1 PHD_FILE: MSMg01no548_e01.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:30:07 2005	CHROMAT_FILE: MSMg01no548_e01.g1 PHD_FILE: MSMg01no548_e01.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:30:07 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	ATATTAACATTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CGCGGAATTCAAAATGATGAGGTATTGCCATAAACAAGATGGTCCTCAGT TTATATTCGAATTAAGGAGAAAGTTCAAAAATATTCTTAATTCTTTTCAG GGATTACTACCTGGGGAAGGAGCTATACTTTTGAAGAAATAATATATTTA CTTATGTAACATTCCACGGGGAACCCGAAGAAAATTTTAAAGGTATTTCA ATGAAAATCACTGGTATTGTGGGGATATAAGGAAACTCTATTTTTCTTAT GGCCAACATGCGGCTGGTTGGTCCAAAATTTTCCCTCGTAGGACAAAAAG GGCTACAATCTCCCGGCCACACCGGAAATTAAGCCGGCGTCCCCACATTT TTTTGAACAGTGACAAAAGTCAGCGCTCTCCGCCCTTCCTTTTTTTCTCG CCTCTCCTCTCCCTTTTATTTTTTTCTCCTATTTCCGTTTCTTGCTTATC TTCGTTTCTCTCTCCTTATCACATTACCTTACGAATCTACGGCATTTTGT GAATAAGTCGCGAACCCAGACGCTTAGTCTCTCATTCTCATTTATACATC AGTAGTCTTGACTGTCGTAAAGGACTTATTGACATATCCACCATTCCATA CCCTCCGACTATTATCCTAACTTATAACGCGTATGCAAGTTGAAATATTA TTTATACATATGACACTCTTATATAATCGCTACTGCTCACTCTTTTATCA TATTATACCTAAATAAGTTTCATCGGCACTGATCATCATGTATTCCATGA CGCATAAGTATTTAATCTACACCCTCAACTTGTAATTATTATCACGAATT AATTTGTCTTGTATTTAGATTGATTACGCATTACTTTGGTTTGAAATAAT AATTCTTTGATCATTACATATTTGTACATCAACTTATTTAATAATTATTT CTTTTTTTG	CTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXACGCCCAGTCACTGCCCATCTCGGG GCATAGTAATGGGGTGACGGGCAAGCAACTAATTAGGTGCTGTCATGCCA CATCAGGTGCTGAAACCTCACGCTGCGGGCTATATAAGCAGCGCCATTTT CCGGGTTCGGGGTCTTCCTTATGTTGAAGCAACAAAAGCTTTGCCATAGA AGGATCCGGTTGTCCGAGTGAATTCTTGCTGGCGAGATACTAGCTCGGGT GAGAGATAATAGTGGTGTAAAACTTACATCTCCACTATAATCAGTCAATA CCTTAGACAACTGTTGGGCACTCACCTGCGTCTAGCACCAAGATAGGTAG CTGGAGATGCAAGAAGGGTTCAATCCATCTGGGAAGTCAAGATGATCTAC TGAAACAAAGAGCAATGCAAGGCTATACCAGAACGTGCCGTAGGGTGTGA TGAAAGTGATGTAATCATCATGATCATGGTTGTATATGTAATTTTGATTG CTGTGTTACAACTGCTGATCAATATTGACTGGACTGAAAGCCTATAGATG TTTGTGGGAAAAATGGATTGAAAATTCACAAATAATTCTCAATTGGTAAC TTTTAAAAAAGATACTAATCCACTGGTCTAATGGAATTTATGGTTTCCAA CCAATGTTGCTTTATCCAACTCATCAAACCCTCTCTAACTTTATCAGATC TATTCCTT
quality values	Open. Hide. 9 9 9 9 8 8 6 8 8 8 8 6 6 8 8 8 10 10 12 17 22 21 28 16 16 12 11 11 12 12 17 19 10 9 9 9 9 11 16 12 11 11 17 23 33 30 30 30 30 30 30 30 30 30 15 17 17 20 20 24 28 28 23 23 13 10 10 10 9 9 11 8 8 8 10 16 21 14 14 16 18 15 13 10 9 9 9 10 10 22 25 10 10 10 16 15 17 14 14 10 8 8 8 8 8 8 12 17 15 15 24 14 14 13 14 10 10 11 13 14 15 13 10 10 13 12 12 8 8 8 8 8 8 15 16 16 12 10 9 9 8 10 8 9 9 8 10 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 10 10 8 8 6 8 8 8 8 8 9 10 9 12 9 9 10 8 8 8 8 8 8 8 8 8 8 8 9 9 9 11 11 8 8 6 6 8 8 8 8 10 13 13 14 13 13 10 10 10 9 9 9 12 10 10 10 10 11 11 9 9 8 7 10 12 6 6 8 8 8 15 11 8 8 8 8 6 8 9 8 8 8 10 12 17 16 10 10 8 8 8 8 8 10 10 12 11 8 8 8 8 10 8 10 8 8 8 8 8 8 8 10 8 11 8 10 10 10 10 10 16 21 17 15 9 8 8 8 8 8 9 10 10 10 10 10 10 11 9 10 9 9 8 8 12 15 12 12 8 8 8 8 8 8 9 9 9 9 10 10 10 9 8 8 10 8 8 8 10 11 11 11 11 10 10 10 10 10 11 8 8 8 8 8 8 6 8 6 6 8 8 8 12 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 9 10 8 8 8 8 8 6 6 6 6 6 11 22 18 12 9 10 9 9 9 10 16 18 11 13 11 11 11 12 11 9 9 6 6 6 6 10 8 10 8 8 10 10 8 8 8 8 6 6 8 8 7 7 10 10 8 8 8 8 8 8 8 8 8 8 10 10 9 8 8 8 8 8 9 9 9 9 9 8 8 13 9 9 9 10 8 10 8 8 8 8 10 15 20 15 10 10 10 8 8 10 10 12 19 21 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 10 10 9 8 10 8 8 8 8 10 9 10 13 13 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 6 6 6 6 8 6 8 8 8 8 10 8 8 8 10 9 9 9 9 9 9 9 9 10 12 11 12 8 8 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 9 10 10 10 8 6 6 6 6 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 6 7 10 8 8 8 9 10 9 9 9 9 9 9 10 9 9 9 9 9 10 9 10 10 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 10 10 10 10 8 8 8 8 8 8 10 16 11 11 11 11 10 10 10 10 13 9 11 10 12 8 8 8 10 8 8 8 8 8 8 8 8 8 9 9 9 12 8 8 8 8 8 8 10 10 9 9 9 9 9 8 8 8 8 8 8 10 8 8 8 8 8 6 6 8 13 8 8 8 8 8 8 9 9 9 9 10 10 13 15 17 10 10 8 8 8 6 6 8 8 8 8 6 8 8 8 8 8 9 10 8 8 8 8 10 7 6 10 10 10 8 8 8 10 10 15 12 8 8 8 10 11 11 7 7 9 8 8 10 10 9 9 10 13 13 16 9 9 10 10 10 10 8 8 9 7 10 6 10 10 11 8 13 8 9 8 8 8 8 7 8 8 9 6 6 6 6 8 8 8 8 6 6 8 8 12 11 8 10 8 8 8 8 10 10 10 11 8 8 9 7 10 8 8 8 8 10 10 10 13 8 8 6 6 8 6 8 8 8 11 11 12 15 8 8 8 12 8 8 9 12 10 8 8 6 6 8 8 12 10 10 10 10 8 8 8 8 8 8 8 10 8 10 11 9 9 8 8 8 8 8 8	Open. Hide. 6 6 6 11 10 9 9 9 10 20 22 37 34 32 25 25 25 25 32 37 32 34 28 28 28 43 43 43 39 39 39 30 30 24 28 19 11 9 13 16 16 23 23 28 28 25 25 23 23 34 34 34 34 46 40 40 30 30 28 36 28 34 36 40 41 41 48 43 43 37 37 41 48 47 47 54 57 57 57 57 57 57 43 42 37 37 37 42 35 35 35 36 36 35 37 37 42 42 44 44 44 47 43 50 37 39 37 36 36 37 37 35 35 36 43 43 43 37 37 35 43 32 32 29 29 29 35 38 59 50 57 57 50 50 35 35 19 25 16 25 28 32 32 35 37 57 57 57 52 52 57 57 57 57 52 52 52 52 52 44 44 52 52 52 57 57 57 52 52 57 57 52 52 57 43 43 39 39 35 43 57 57 57 57 57 57 52 57 57 57 62 62 52 52 52 52 62 62 62 62 62 62 47 43 38 38 14 24 29 43 43 52 52 52 62 62 62 52 52 62 62 62 62 52 43 43 43 31 31 35 43 43 43 39 39 39 39 39 43 44 44 43 39 39 35 24 33 18 26 43 44 57 57 57 57 57 57 43 35 35 38 38 23 26 27 27 33 33 35 43 43 43 57 39 43 43 44 44 57 43 43 33 28 29 29 43 43 52 43 43 43 32 31 31 35 43 41 43 33 35 35 38 38 43 43 43 37 37 43 44 43 52 43 43 37 37 37 50 50 50 50 48 50 50 32 32 32 43 43 57 32 32 20 20 20 32 32 43 42 42 42 32 32 37 38 39 44 44 57 57 57 57 34 32 12 12 18 26 21 35 36 44 41 41 35 41 39 43 43 43 48 48 44 42 35 35 41 32 25 41 42 42 40 42 48 47 42 35 28 28 28 28 28 23 19 24 15 15 15 30 30 33 32 32 28 23 23 28 28 24 24 18 18 24 22 18 18 13 18 13 19 20 33 30 33 28 28 22 31 31 31 22 24 25 20 21 22 22 18 14 18 17 17 16 15 15 22 23 34 39 40 40 37 37 13 13 9 9 11 11 20 20 19 21 25 25 21 19 19 19 20 22 22 24 16 15 18 19 19 25 15 10 6 6 6 10 13 18 14 15 12 11 11 12 17 17 11 13 13 19 13 13 12 14 14 21 37 37 17 13 6 6 8 8 10 10 11 13 13 17 23 19 15 15 10 12 12 13 10 10 10 10 8 8 11 8 8 15 8 6 6 7 11 24 28 32 16 14 10 10 11 14 12 14 16 14 11 21 11 10 10 10 15 10 16 15 21 14 15 15 10 10 8 8 8 8 14 14 10 10 10 10 11 11 10 8 8 8 8 8 8 8 8 8 10 10 10 10 14 13 14 11 11 10 8 8 8 8 8 11 18 13 15 10 10 12 10 18 9 10 9 9 11 10 14 8 8 6 8 8 8 9 8 10 9 10 8 8 6 6 8 8 11 11 11 10 11 10 10 10 10 15 13 22 8 8 8 13 6 7 7 7 10 12 13 13 10 9 12 8 8 8 8 13 9 9 10 10 10 11 10 8 8 8 8 6 6 8 13 19 13 12 15 9 9 8 8 8 8 9 9 8 8 8 10 8 8 8 8 9 9 17 15 17 11 11 10 9 9 9 9 9 9 10 9 10 10 10 10 10 7 8 6 6 6 8 8 8 8 15 11 11 9 9 6 6 6 6 6 6 9 9 9 9 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no548_e01.g1 MSMg01no548_e01.g1 CHROMAT_FILE:
MSMg01no548_e01.g1 PHD_FILE: MSMg01no548_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:07 2005
         (337 letters)



>mm_chr16_39171721_39172457
          Length = 737

 Score =  652 bits (337), Expect = 0.0
 Identities = 337/337 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   acgcccagtcactgcccatctcggggcatagtaatggggtgacgggcaagcaactaatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgcccagtcactgcccatctcggggcatagtaatggggtgacgggcaagcaactaatta 260

                                                                       
Query: 61  ggtgctgtcatgccacatcaggtgctgaaacctcacgctgcgggctatataagcagcgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgctgtcatgccacatcaggtgctgaaacctcacgctgcgggctatataagcagcgcc 320

                                                                       
Query: 121 attttccgggttcggggtcttccttatgttgaagcaacaaaagctttgccatagaaggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttccgggttcggggtcttccttatgttgaagcaacaaaagctttgccatagaaggat 380

                                                                       
Query: 181 ccggttgtccgagtgaattcttgctggcgagatactagctcgggtgagagataatagtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccggttgtccgagtgaattcttgctggcgagatactagctcgggtgagagataatagtgg 440

                                                                       
Query: 241 tgtaaaacttacatctccactataatcagtcaataccttagacaactgttgggcactcac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaaaacttacatctccactataatcagtcaataccttagacaactgttgggcactcac 500

                                                
Query: 301 ctgcgtctagcaccaagataggtagctggagatgcaa 337
           |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgcgtctagcaccaagataggtagctggagatgcaa 537


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space:   238784
Effective search space used:   238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information