MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-004F17
Chromosome	17 (Build37)
Map Location	8,874,492 - 9,021,677
singlet/doublet	doublet
Overlap gene	Pde10a
Upstream gene	Fndc1, EG634588, LOC100040748, LOC100040760, LOC667102, Tagap, Rshl2a, LOC100040822, Rnaset2a, Fgfr1op, Ccr6, LOC667114, Brp44l, Sft2d1, LOC100038858, 9630019K15Rik, EG435502, LOC433063, T2, T, LOC100040817
Downstream gene	1700010I14Rik, EG667165, EG667170, LOC666143, 4932702K14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fndc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68655 MGI:1915905
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG634588 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634588 MGI:3645817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040748 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC667102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Tagap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72536 MGI:3615484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rshl2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66832 MGI:1914082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 17 ESTs, 1 Protein

name	Rnaset2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 127 ESTs, 2 Proteins

name	Fgfr1op (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75296 MGI:1922546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12458 MGI:1333797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667114 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 3 Proteins pseudo : _no_value

name	Brp44l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55951 MGI:1915240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sft2d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106489 MGI:1918689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630019K15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320111 MGI:2443403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435502 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435502 MGI:3647869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC433063 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 540 ESTs, 2 Proteins pseudo : _no_value

name	T2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21331 MGI:104658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	T (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20997 MGI:98472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040817 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Pde10a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23984 MGI:1345143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010I14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66931 MGI:1914181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667165 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667165 MGI:3648092
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG667170 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667170 MGI:3643249
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	LOC666143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	4932702K14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67543 MGI:1914793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Fndc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487224 GeneID:68655 MGI:1915905
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III domain containing 1 transcript_id : NM_001081416.1

name	LOC100040748 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268391 GeneID:100040748
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001475177.1

name	LOC100040760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268393 GeneID:100040760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001475200.1

name	Tagap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22165373 GeneID:72536 MGI:3615484
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell activation Rho GTPase-activating protein transcript_id : NM_145968.1

name	Rshl2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803214 GeneID:66832 MGI:1914082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : radial spokehead-like 2A transcript_id : NM_025789.4

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268396 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100040822, transcript variant 1 transcript_id : XM_001476254.1

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268398 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs product : hypothetical protein LOC100040822, transcript variant 2 transcript_id : XM_001476269.1

name	LOC100040822 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268400 GeneID:100040822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs, 1 Protein product : hypothetical protein LOC100040822, transcript variant 3 transcript_id : XM_001476289.1

name	Rnaset2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268402 GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 126 ESTs, 2 Proteins product : ribonuclease T2A, transcript variant 1 transcript_id : XM_001476345.1

name	Rnaset2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268404 GeneID:100037283 MGI:1915445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 113 ESTs, 1 Protein product : ribonuclease T2A, transcript variant 2 transcript_id : XM_001476365.1

name	Fgfr1op (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365869 GeneID:75296 MGI:1922546
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fgfr1 oncogene partner transcript_id : NM_201230.3

name	Ccr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803448 GeneID:12458 MGI:1333797
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) receptor 6 transcript_id : NM_009835.3

name	Brp44l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360084 GeneID:55951 MGI:1915240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain protein 44-like transcript_id : NM_018819.4

name	Sft2d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88853574 GeneID:106489 MGI:1918689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SFT2 domain containing 1 transcript_id : NM_134114.2

name	LOC100038858 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268388 GeneID:100038858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038858 transcript_id : XM_001471593.1

name	9630019K15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254340 GeneID:320111 MGI:2443403
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630019K15 gene transcript_id : NM_178774.3

name	T2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305536 GeneID:21331 MGI:104658
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brachyury 2 transcript_id : NM_013682.1

name	T (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130357 GeneID:20997 MGI:98472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brachyury transcript_id : NM_009309.2

name	Pde10a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909346 GeneID:23984 MGI:1345143
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 10A transcript_id : NM_011866.2

name	1700010I14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384085 GeneID:66931 MGI:1914181
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700010I14 gene transcript_id : NM_025851.2

name	Fndc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487225 GeneID:68655 MGI:1915905
definition	codon_start : 1 product : fibronectin type III domain containing 1 protein_id : NP_001074885.1

name	LOC100040748 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268392 GeneID:100040748
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475227.1

name	LOC100040760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268394 GeneID:100040760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475250.1

name	Tagap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165374 CCDS:CCDS28379.1 GeneID:72536 MGI:3615484
definition	codon_start : 1 product : T-cell activation Rho GTPase-activating protein protein_id : NP_666080.1

name	Rshl2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55741725 GeneID:66832 MGI:1914082
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : radial spokehead-like 2 product : radial spokehead-like 2A protein_id : NP_080065.3

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268397 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001476304.1

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268399 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001476319.1

name	LOC100040822 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268401 GeneID:100040822
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001476339.1

name	Rnaset2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268405 GeneID:100037283 MGI:1915445
definition	codon_start : 1 product : ribonuclease T2A isoform 2 protein_id : XP_001476415.1

name	Rnaset2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268403 GeneID:100037283 MGI:1915445
definition	codon_start : 1 product : ribonuclease T2A isoform 1 protein_id : XP_001476395.1

name	Fgfr1op (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47777353 CCDS:CCDS28380.1 GeneID:75296 MGI:1922546
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Fgfr1 oncogene partner protein_id : NP_957682.1

name	Ccr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753318 CCDS:CCDS28381.1 GeneID:12458 MGI:1333797
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004945 - angiotensin type II receptor activity [Evidence IEA]; GO:0016493 - C-C chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : chemokine (C-C motif) receptor 6 protein_id : NP_033965.1

name	Brp44l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055178 GeneID:55951 MGI:1915240
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence IEA] [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : apoptosis-regulating basic protein product : brain protein 44-like protein_id : NP_061289.1

name	Sft2d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88853575 GeneID:106489 MGI:1918689
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : SFT2 domain containing 1 protein_id : NP_598875.2

name	LOC100038858 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268389 GeneID:100038858
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471643.1

name	9630019K15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254341 CCDS:CCDS28382.1 GeneID:320111 MGI:2443403
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC320111 protein_id : NP_848889.2

name	T2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305537 GeneID:21331 MGI:104658
definition	codon_start : 1 exception : mismatches in translation product : brachyury 2 protein_id : NP_038710.1

name	T (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678203 CCDS:CCDS28383.1 GeneID:20997 MGI:98472
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001839 - neural plate morphogenesis [Evidence IMP]; GO:0030903 - notochord development [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : brachyury-like 3; brachyury-like 2; low ratio; brachyury(T) product : brachyury protein_id : NP_033335.1

name	Pde10a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909347 CCDS:CCDS28384.1 GeneID:23984 MGI:1345143
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IDA] codon_start : 1 note : dual-substrate cAMP and cGMP, cyclic nucleotide phosphodiesterase product : phosphodiesterase 10A protein_id : NP_035996.2

name	1700010I14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385330 CCDS:CCDS28385.1 GeneID:66931 MGI:1914181
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66931 protein_id : NP_080127.1

name	EG634588 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634588
definition	number : 1 pseudo : _no_value

name	EG634588 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634588
definition	number : 2 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 6 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 5 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 4 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 3 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 2 pseudo : _no_value

name	LOC667102 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667102
definition	number : 1 pseudo : _no_value

name	EG435502 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435502
definition	number : 1 pseudo : _no_value

name	LOC100040817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040817
definition	number : 2 pseudo : _no_value

name	LOC100040817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040817
definition	number : 1 pseudo : _no_value

name	EG667165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667165
definition	number : 1 pseudo : _no_value

name	EG667165 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667165
definition	number : 2 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 4 pseudo : _no_value

name	LOC666143 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666143
definition	number : 2 pseudo : _no_value

name	LOC666143 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666143
definition	number : 1 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 3 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 2 pseudo : _no_value

name	EG667170 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667170
definition	number : 1 pseudo : _no_value

name	LOC667114 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268395 GeneID:667114
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 3 Proteins product : similar to Phosphopantothenoylcysteine synthetase pseudo : _no_value transcript_id : XR_032140.1

name	LOC433063 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268408 GeneID:433063
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 540 ESTs, 2 Proteins product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_032837.1

name	4932702K14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268390 GeneID:67543 MGI:1914793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932702K14 gene pseudo : _no_value transcript_id : XR_035111.1

clone name	MSMg01-454N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-080C19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-147A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098J02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-386H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124H03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-450A10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-379K16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359O14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-493C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-130K23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-125C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-394E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-519M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-438B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-442G01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-434J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-004F17.b	B6Ng01-004F17.g
ACC	DH841788	DH841789
length	1,193	1,104
definition	DH841788\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004F17, 5' end.	DH841789\|Mus musculus domesticus DNA, BAC clone: B6Ng01-004F17, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(9,020,457 - 9,021,677)	(8,874,492 - 8,875,606)
sequence	gaattccacaattggaaagccaacaacttcccttgggagagaaaccaaga gaaaagagatccatcaaaagaaatgaagccaaataagcaaaatttaaaac tcagctcccatcattgtgaggaagaccgggagagggcattcaggggagtt attagggaccagggtcagctgagaggacgtctatggtttaatctctcttt ttgctgttttctgacatggtgaatacaaaccaaatctttataaagagaac tcagatgtgaacaggttccctacctcagggcatcccgtgggtaaaaccga ttcactgtttttacagggataattttctgggtgggtttcaaagctatgtg cagtagataaggaagactcaggatcctgggtttgtggtgagtccccaggc aacagactctgattgttgtggtccccgtgagaggtacttccatacctgca caggcatgaagtgactgtcataccatgtgtctccctgagaaaggacctct taaggctgagagtatctggactttcggaggagggaggctaagatgagtct caggcctggagattattttctttgctttgtaacataagactgcaggtgac ccatacataaacaagaatagtgctcctcacaacctcagaatcccactaag caacaaatagataagaagtgttcacctggcctatgctggagatcactgaa aaaggcatgcacatacatccatgcatacatacatacactcacacaataca tggatgcacacatgcatacacgcatgcacacatgcatgaagacaggcatg caagcacatacaaaaaggtccagtaaggcaaaagacagcatgcttggaca aagtaatgaagaatgcagacaaaagacaggaagcgagacagacagacatg aggaaggcttagcataccaagaaggaagcactctgctgataaactgccta ttcacagtcaaaggggaaatatgggtcatgtgcaaaactcagcctcctta aatgcaagcaggtgtatgttctggagagacccagtggcaggcatagtagt gtgagatgtgcctccctgtccccactgtgggcttaaacaagttctttgac gtgtctctttaatagtcccgaagagacccatgcatctacgatgtcattgc tggtcaaggtgttcaaggcctcacccctgcctaactcagctgt	gaattcataaggctaaaagcttatgtgtgaaagcaagctgaggggccata cgttagataatgtctggtgattagagctggaagatactcaggcacatcca tgggaagggtgttttttggcactgtggtctttgttaaacaccagtggaag tgatgggcaaaacttgagacctttttggtttttgctcaggtatccacagg gccctggatctgagagagccttggccaggtgtctgcatgaatgtggcttt gtccttcctcattttcctgagctaacacaggcccgtgtatgccacttcca gtcaagactttcccatcaccgtgttaactgctcttgcaaatttggcctgg gaggttggcagggcacacactctgtttatcacgttaatatggcaattcac taaatatgaaaaatccaaactatgagaaaaaaaattgacctttctgagtg ctggagaccactctgcttcattgtggttttgtgctcaagtcttaggcaaa taaaaaataaaaaataaaataaaaaaaggtggtcagaaatcattcttatt tgctaaattttagcttccttaaaagaatgtaagttcctttacaaatcagt gtgaattcctgccaccgcaggttcttgggagtcacacttgtgcttgcatg gtttttacccatgagccatcttcccggctctgccgttgagttgttcttct ttttaaaaagaacttttaattgattttttgtaagtttcccatcatgcacc ccaattccactcatctccccatccctttatatcttccctctgccctttgc aacctccctaccaaaagaaaataaacaacaacaacacacaacacattatt ataatataataaccaaaaggtaaaagccatcttgtggagccgtggtatgt cacatgtgccccacagtgtaatccttttgtccacagaactttacttgcaa tgttcatcccaactagtcattggtctggtgggagcctctggcttctgcta cacaacaatactggatcctccctggactcctctcagacatcctgttgttg ccttgtgaacatggagttcttcagctttgatctgcaggatcagccttctc atgc
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr17_9020457_9021677
seq2: B6Ng01-004F17.b_46_1238 (reverse)

seq1  ACAGCTGAGTTAAAGCAGGGGTGAGGCCCTTGGACCCACCTGGACAGGCT  50
      ||||||||||| | |||||||||||| ||||| |  ||||| |||  || 
seq2  ACAGCTGAGTT-AGGCAGGGGTGAGG-CCTTGAA--CACCTTGACCAGC-  45

seq1  TATTGAACCAATCAGTAGGATGCATGAGTCTCTTCGGGGGACATTATAAA  100
       | |||    ||| ||| |||||||| ||||||||  ||||| |  ||||
seq2  -AATGA---CATC-GTA-GATGCATGGGTCTCTTC--GGGAC-TATTAAA  86

seq1  GAGACCACGTCTATAGAACTTTTGTTATAAAGGCCCACAGTGGGGACAGG  150
      |||| |||||| | |||||  ||||| |||  ||||||||||||||||||
seq2  GAGA-CACGTC-AAAGAAC--TTGTT-TAA--GCCCACAGTGGGGACAGG  129

seq1  GAGGGCACATCCTCACACTAACTTATTGCCTGCCACTGGGTCTCTCCAGA  200
      || ||||||| |||||||| |||   ||||||||||||||||||||||||
seq2  GA-GGCACAT-CTCACACT-ACT--ATGCCTGCCACTGGGTCTCTCCAGA  174

seq1  ACATACACCCTGCTTGCATTTTAAGGAGGCTGAGTTTTGCACATGA-CCA  249
      ||||||| |||||||||| ||||||||||||||||||||||||||| |||
seq2  ACATACA-CCTGCTTGCA-TTTAAGGAGGCTGAGTTTTGCACATGACCCA  222

seq1  TATTTCCCCCTTGACTGTTGAATAGGCAGTTTATCAGCAGAGTGCTTCCT  299
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  TATTTCCCCTTTGACTG-TGAATAGGCAGTTTATCAGCAGAGTGCTTCCT  271

seq1  TCTTGGTATGCTTAGCCTTCCTCATGTCTGTCTGTCTCGCTTCCTGTCTT  349
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTATGCTAAGCCTTCCTCATGTCTGTCTGTCTCGCTTCCTGTCTT  321

seq1  TTGTCTGCATTCTTCATTACTTTGTCCAAGCATGCTGTCTTTTGCCTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGCATTCTTCATTACTTTGTCCAAGCATGCTGTCTTTTGCCTTAC  371

seq1  TGGACCTTTTTGTATGTGCTTGCATGCCTGTCTTCATGCATGTGTGCATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTTTTTGTATGTGCTTGCATGCCTGTCTTCATGCATGTGTGCATG  421

seq1  CGTGTATGCATGTGTGCATCCATGTATTGTGTGAGTGTATGTATGTATGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATGCATGTGTGCATCCATGTATTGTGTGAGTGTATGTATGTATGC  471

seq1  ATGGATGTATGTGCATGCCTTTTTCAGTGATCTCCAGCATAGGCCAGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTATGTGCATGCCTTTTTCAGTGATCTCCAGCATAGGCCAGGTG  521

seq1  AACACTTCTTATCTATTTGTTGCTTAGTGGGATTCTGAGGTTGTGAGGAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCTTATCTATTTGTTGCTTAGTGGGATTCTGAGGTTGTGAGGAG  571

seq1  CACTATTCTTGTTTATGTATGGGTCACCTGCAGTCTTATGTTACAAAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTCTTGTTTATGTATGGGTCACCTGCAGTCTTATGTTACAAAGCA  621

seq1  AAGAAAATAATCTCCAGGCCTGAGACTCATCTTAGCCTCCCTCCTCCGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATAATCTCCAGGCCTGAGACTCATCTTAGCCTCCCTCCTCCGAA  671

seq1  AGTCCAGATACTCTCAGCCTTAAGAGGTCCTTTCTCAGGGAGACACATGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGATACTCTCAGCCTTAAGAGGTCCTTTCTCAGGGAGACACATGG  721

seq1  TATGACAGTCACTTCATGCCTGTGCAGGTATGGAAGTACCTCTCACGGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGTCACTTCATGCCTGTGCAGGTATGGAAGTACCTCTCACGGGG  771

seq1  ACCACAACAATCAGAGTCTGTTGCCTGGGGACTCACCACAAACCCAGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAACAATCAGAGTCTGTTGCCTGGGGACTCACCACAAACCCAGGAT  821

seq1  CCTGAGTCTTCCTTATCTACTGCACATAGCTTTGAAACCCACCCAGAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCTTCCTTATCTACTGCACATAGCTTTGAAACCCACCCAGAAAA  871

seq1  TTATCCCTGTAAAAACAGTGAATCGGTTTTACCCACGGGATGCCCTGAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCTGTAAAAACAGTGAATCGGTTTTACCCACGGGATGCCCTGAGG  921

seq1  TAGGGAACCTGTTCACATCTGAGTTCTCTTTATAAAGATTTGGTTTGTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAACCTGTTCACATCTGAGTTCTCTTTATAAAGATTTGGTTTGTAT  971

seq1  TCACCATGTCAGAAAACAGCAAAAAGAGAGATTAAACCATAGACGTCCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCATGTCAGAAAACAGCAAAAAGAGAGATTAAACCATAGACGTCCTC  1021

seq1  TCAGCTGACCCTGGTCCCTAATAACTCCCCTGAATGCCCTCTCCCGGTCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGACCCTGGTCCCTAATAACTCCCCTGAATGCCCTCTCCCGGTCT  1071

seq1  TCCTCACAATGATGGGAGCTGAGTTTTAAATTTTGCTTATTTGGCTTCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACAATGATGGGAGCTGAGTTTTAAATTTTGCTTATTTGGCTTCAT  1121

seq1  TTCTTTTGATGGATCTCTTTTCTCTTGGTTTCTCTCCCAAGGGAAGTTGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGATGGATCTCTTTTCTCTTGGTTTCTCTCCCAAGGGAAGTTGT  1171

seq1  TGGCTTTCCAATTGTGGAATTC  1221
      ||||||||||||||||||||||
seq2  TGGCTTTCCAATTGTGGAATTC  1193

seq1: chr17_8874492_8875606
seq2: B6Ng01-004F17.g_67_1170

seq1  GAATTCATAAGGCTAAAAGCTTATGTGTGAAAGCAAGCTGAGGGGCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGGCTAAAAGCTTATGTGTGAAAGCAAGCTGAGGGGCCATA  50

seq1  CGTTAGATAATGTCTGGTGATTAGAGCTGGAAGATACTCAGGCACATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAGATAATGTCTGGTGATTAGAGCTGGAAGATACTCAGGCACATCCA  100

seq1  TGGGAAGGGTGTTTTTTGGCACTGTGGTCTTTGTTAAACACCAGTGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGGTGTTTTTTGGCACTGTGGTCTTTGTTAAACACCAGTGGAAG  150

seq1  TGATGGGCAAAACTTGAGACCTTTTTGGTTTTTGCTCAGGTATCCACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGCAAAACTTGAGACCTTTTTGGTTTTTGCTCAGGTATCCACAGG  200

seq1  GCCCTGGATCTGAGAGAGCCTTGGCCAGGTGTCTGCATGAATGTGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGATCTGAGAGAGCCTTGGCCAGGTGTCTGCATGAATGTGGCTTT  250

seq1  GTCCTTCCTCATTTTCCTGAGCTAACACAGGCCCGTGTATGCCACTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTCATTTTCCTGAGCTAACACAGGCCCGTGTATGCCACTTCCA  300

seq1  GTCAAGACTTTCCCATCACCGTGTTAACTGCTCTTGCAAATTTGGCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGACTTTCCCATCACCGTGTTAACTGCTCTTGCAAATTTGGCCTGG  350

seq1  GAGGTTGGCAGGGCACACACTCTGTTTATCACGTTAATATGGCAATTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGGCAGGGCACACACTCTGTTTATCACGTTAATATGGCAATTCAC  400

seq1  TAAATATGAAAAATCCAAACTATGAGAAAAAAAATTGACCTTTCTGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGAAAAATCCAAACTATGAGAAAAAAAATTGACCTTTCTGAGTG  450

seq1  CTGGAGACCACTCTGCTTCATTGTGGTTTTGTGCTCAAGTCTTAGGCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACCACTCTGCTTCATTGTGGTTTTGTGCTCAAGTCTTAGGCAAA  500

seq1  TAAAAAATAAAAAATAAAATAAAAAAAGGTGGTCAGAAATCATTCTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAAAAATAAAATAAAAAAAGGTGGTCAGAAATCATTCTTATT  550

seq1  TGCTAAATTTTAGCTTCCTTAAAAGAATGTAAGTTCCTTTACAAATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAATTTTAGCTTCCTTAAAAGAATGTAAGTTCCTTTACAAATCAGT  600

seq1  GTGAATTCCTGCCACCGCAGGTTCTTGGGAGTCACACTTGTGCTTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCCTGCCACCGCAGGTTCTTGGGAGTCACACTTGTGCTTGCATG  650

seq1  GTTTTTACCCATGAGCCATCTTCCCGGCTCTGCCGTTGAGTTGTTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTACCCATGAGCCATCTTCCCGGCTCTGCCGTTGAGTTGTTCTTCT  700

seq1  TTTTAAAAAGAACTTTTAATTGATTTTTTGTAAGTTTCCCATCATGCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAGAACTTTTAATTGATTTTTTGTAAGTTTCCCATCATGCACC  750

seq1  CCAATTCCACTCATCTCCCCATCCCTTTATATCTTCCCTCTGCCC-TTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCAATTCCACTCATCTCCCCATCCCTTTATATCTTCCCTCTGCCCTTTGC  800

seq1  AACCTCCCTACCAAAAGAAAATAAACAACAACAACAACAACAACAACAAT  849
      ||||||||||||||||||||||||||||||||||||   ||||||   ||
seq2  AACCTCCCTACCAAAAGAAAATAAACAACAACAACA--CACAACA--CAT  846

seq1  AATAATAATAATAATAAACCAAAAGGTAAAAGCCATCTTGTGGAAGCCGT  899
       || ||||| ||||| ||||||||||||||||||||||||||| ||||||
seq2  TATTATAAT-ATAAT-AACCAAAAGGTAAAAGCCATCTTGTGG-AGCCGT  893

seq1  GGTATGTCACAATGTGCCCCACAGTGT-ATCCTTTTGTCCACAGAACTTT  948
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  GGTATGTCAC-ATGTGCCCCACAGTGTAATCCTTTTGTCCACAGAACTTT  942

seq1  ACTTGCAAATGTTCATCCCAACTAGTCATTGGTCTGGTGGGAAGCCTCTG  998
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTTGC-AATGTTCATCCCAACTAGTCATTGGTCTGGTGGG-AGCCTCTG  990

seq1  GCTTCTGCTACACCATCAATACTGGATCCTCCCTGGGACTCCTCTCAGAC  1048
      |||||||||||| || |||||||||||||||||| |||||||||||||||
seq2  GCTTCTGCTACA-CAACAATACTGGATCCTCCCT-GGACTCCTCTCAGAC  1038

seq1  ATCCTGTTGTTGCCCTGTG-ACATGGAGGTCCTTCAGCTTTGGATCTGCA  1097
      |||||||||||||| |||| ||||||| || |||||||||| ||||||||
seq2  ATCCTGTTGTTGCCTTGTGAACATGGA-GTTCTTCAGCTTT-GATCTGCA  1086

seq1  GGATCAGCCTTCTCATGC  1115
      ||||||||||||||||||
seq2  GGATCAGCCTTCTCATGC  1104

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information