BAC Information

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BAC

Clone NameB6Ng01-007A11
Chromosome17 (Build37)
Map Location 83,581,783 - 83,727,041
singlet/doubletdoublet
Overlap geneAW548124, EG545226
Upstream geneLOC625467, LOC668836, EG433141, EG625514, LOC100043711, LOC100043900
Downstream geneEml4, Cox7a2l, Kcng3, Mta3, Haao, Zfp36l2, Thada
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007A11.bB6Ng01-007A11.g
ACCDH843723DH843724
length506776
definitionDH843723|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A11, 5' end.DH843724|Mus musculus domesticus DNA, BAC clone: B6Ng01-007A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,726,530 - 83,727,041)(83,581,783 - 83,582,558)
sequence
ttttttttcattatagaaatggagaaaaccgagcttcaaggacttagttc
acttgtcagaagtcacacactcgtgggttgatggtctggaacctgtattg
gaatcagtcttgttccagaactcatgtgttcattactatgcaaagctggt
ctcctagtgggatgcttgaattatatacagcaaatacagctgtgtgcatt
gagctgggaatatggttcagttggtaaagagcttacctcgtgtgcacaga
gccctgggttcagtcacagcaccctgtccatgagaactagcagtgcacat
ctgtgatcccgccaccaggaggtagagccaggagggtcagaagtactgtt
gttaggtatcaagttcaaaactagcctgggatccatgaaacacctctctc
aaaaacaaaccaataaaacaaaacaacaacaataataaaacaaaacaaaa
caagccaacaatgtatatatacagagaagaaaggaaaggagggaggaagg
aggaag
gaattccaggatccagagttcacgattgatcgggatctccatgaacttgt
tgaaagggggaccgtccgtggacttttggaagaggggcagagagaacagc
caggctaatatagatcagctcctggccaaggctctcttgccccttttctt
ttctttttttttttaagatttatttattgattatatgtaagtacactgta
gctgtcttcagacactccagaaaagggagtcagatctcgttactctcgtt
acagatggttgtgagccaccatgtggttgctgggatttgaactcagaacc
ttcagaagagcagtcgggtgctcttacccactgagccatctcacgaaccc
tcttgccccttttctaaagacccaacagcccctcttccctacggctctct
gtgtccccagatttattttgctttctttcgctaaatcaaactttatcaga
cagttttactgtcagccgttaaaccaaaatgtgtttgtgcaacagtaaac
accttgttacttcagggaaggattacataaacaacgttggatgaggcaga
catgctgtactgggagggaggctgctgcccacgtgggtgtggaggaagac
acttggtggggggcactccagggccaggaggcaaggggatggggctcact
ctggcctgggttttctgctgtaaaatgggaaggtgggtgacagtccaaat
tgaacaatgaggtcttctaaagatcacagtcagggtaagggccctgtcgt
aacccttgagggagaattgtttggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83726530_83727041
seq2: B6Ng01-007A11.b_44_555 (reverse)

seq1  CTTCCTCCTTCCTCCCTCCTTTCCTTTCTTCTCTGTATATATACATTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCTTCCTCCCTCCTTTCCTTTCTTCTCTGTATATATACATTGTT  50

seq1  GGCTTGTTTTGTTTTGTTTTATTATTGTTGTTGTTTTGTTTTATTGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTTTTGTTTTGTTTTATTATTGTTGTTGTTTTGTTTTATTGGTTT  100

seq1  GTTTTTGAGAGAGGTGTTTCATGGATCCCAGGCTAGTTTTGAACTTGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGAGAGAGGTGTTTCATGGATCCCAGGCTAGTTTTGAACTTGATA  150

seq1  CCTAACAACAGTACTTCTGACCCTCCTGGCTCTACCTCCTGGTGGCGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAACAGTACTTCTGACCCTCCTGGCTCTACCTCCTGGTGGCGGGA  200

seq1  TCACAGATGTGCACTGCTAGTTCTCATGGACAGGGTGCTGTGACTGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATGTGCACTGCTAGTTCTCATGGACAGGGTGCTGTGACTGAACC  250

seq1  CAGGGCTCTGTGCACACGAGGTAAGCTCTTTACCAACTGAACCATATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCTGTGCACACGAGGTAAGCTCTTTACCAACTGAACCATATTCC  300

seq1  CAGCTCAATGCACACAGCTGTATTTGCTGTATATAATTCAAGCATCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAATGCACACAGCTGTATTTGCTGTATATAATTCAAGCATCCCAC  350

seq1  TAGGAGACCAGCTTTGCATAGTAATGAACACATGAGTTCTGGAACAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGACCAGCTTTGCATAGTAATGAACACATGAGTTCTGGAACAAGAC  400

seq1  TGATTCCAATACAGGTTCCAGACCATCAACCCACGAGTGTGTGACTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCAATACAGGTTCCAGACCATCAACCCACGAGTGTGTGACTTCTG  450

seq1  ACAAGTGAACTAAGTCCTTGAAGCTCGGTTTTCTCCATTTCTATAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAACTAAGTCCTTGAAGCTCGGTTTTCTCCATTTCTATAATGAA  500

seq1  AAAAAAGAATTC  512
      ||||||||||||
seq2  AAAAAAGAATTC  512

seq1: chr17_83581783_83582558
seq2: B6Ng01-007A11.g_67_842

seq1  GAATTCCAGGATCCAGAGTTCACGATTGATCGGGATCTCCATGAACTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATCCAGAGTTCACGATTGATCGGGATCTCCATGAACTTGT  50

seq1  TGAAAGGGGGACCGTCCGTGGACTTTTGGAAGAGGGGCAGAGAGAACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGGGACCGTCCGTGGACTTTTGGAAGAGGGGCAGAGAGAACAGC  100

seq1  CAGGCTAATATAGATCAGCTCCTGGCCAAGGCTCTCTTGCCCCTTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAATATAGATCAGCTCCTGGCCAAGGCTCTCTTGCCCCTTTTCTT  150

seq1  TTCTTTTTTTTTTTAAGATTTATTTATTGATTATATGTAAGTACACTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTTAAGATTTATTTATTGATTATATGTAAGTACACTGTA  200

seq1  GCTGTCTTCAGACACTCCAGAAAAGGGAGTCAGATCTCGTTACTCTCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCAGACACTCCAGAAAAGGGAGTCAGATCTCGTTACTCTCGTT  250

seq1  ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGAACC  300

seq1  TTCAGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACGAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACGAACCC  350

seq1  TCTTGCCCCTTTTCTAAAGACCCAACAGCCCCTCTTCCCTACGGCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCCTTTTCTAAAGACCCAACAGCCCCTCTTCCCTACGGCTCTCT  400

seq1  GTGTCCCCAGATTTATTTTGCTTTCTTTCGCTAAATCAAACTTTATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCCAGATTTATTTTGCTTTCTTTCGCTAAATCAAACTTTATCAGA  450

seq1  CAGTTTTACTGTCAGCCGTTAAACCAAAATGTGTTTGTGCAACAGTAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTACTGTCAGCCGTTAAACCAAAATGTGTTTGTGCAACAGTAAAC  500

seq1  ACCTTGTTACTTCAGGGAAGGATTACATAAACAACGTTGGATGAGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTACTTCAGGGAAGGATTACATAAACAACGTTGGATGAGGCAGA  550

seq1  CATGCTGTACTGGGAGGGAGGCTGCTGCCCACGTGGGTGTGGAGGAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTACTGGGAGGGAGGCTGCTGCCCACGTGGGTGTGGAGGAAGAC  600

seq1  ACTTGGTGGGGGGCACTCCAGGGCCAGGAGGCAAGGGGATGGGGCTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTGGGGGGCACTCCAGGGCCAGGAGGCAAGGGGATGGGGCTCACT  650

seq1  CTGGCCTGGGTTTTCTGCTGTAAAATGGGAAGGTGGGTAGACAGTCCAAA  700
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGGCCTGGGTTTTCTGCTGTAAAATGGGAAGGTGGGT-GACAGTCCAAA  699

seq1  TTGAACAATGAGGTCTTCTAAAGATCACAGTCAGGGTAAGGGCCCTGTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAATGAGGTCTTCTAAAGATCACAGTCAGGGTAAGGGCCCTGTCG  749

seq1  TAGCCC-TGAGGGAGAATCGGTTGGGA  776
      || ||| ||||||||||| | ||||||
seq2  TAACCCTTGAGGGAGAATTGTTTGGGA  776