BAC Information

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BAC

Clone NameB6Ng01-007B12
Chromosome17 (Build37)
Map Location 22,651,622 - 22,739,566
singlet/doubletdoublet
Overlap geneEG210876, LOC100042656, EG628185
Upstream geneLOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik
Downstream geneENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007B12.bB6Ng01-007B12.g
ACCDH843768DH843769
length1,1581,064
definitionDH843768|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B12, 5' end.DH843769|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,651,622 - 22,652,786)(22,738,497 - 22,739,566)
sequence
gaattctctgtactgtctttgtccttactacttatgtatctttcagaata
tatgatcacatggtaaaaagatcaccacaagtttacacataaattcaaat
cataaattaagaagtttacaacagagaatgtttacatgcatatcaactag
gagtaattatctggctaaaagttcattatctgtcactagctcaacaggct
cattgaaagtaaaaaaaaaaacatattttttgtgactaagttattatgga
agttttctacttataaacccagtcaatttttttatcttctctccttgcac
ctatagtaaattcttagttctatttttatgacctttggttaattgtttta
taaccctttggaatatgctctcagttgtaaaagcctgttttctctctcag
aaacaatgaactcttctgaaattttgaagacttgcagagttctaattgca
gttttcacataggaaaggtcttaatagcagtctattcttaaagatcttaa
taattcctaatataatcttaggaattcttttatcatcatcattaagaatt
aagaaatatggtatccctacaagggcagtatattttcattaccctgcaga
aatgtgtacaaagggtggactaatacccagtgtttcttatataaatttaa
taataaccaaaataaattaataacaggaatctttcctccaacttaatctt
ctcggccttgcctaaagaagcaaatccgacatcctttacagttcatgagg
gaaccatctcagcaagatcacctgctaggtttgagtttctcctagatgtc
tcctggcatcagtggcttcatgcacaatgcctggctgctgttgactccaa
tttctctatatctgaatgcatgggtgtgcccctctggactctatggggac
atccacccattccaatctttgttttaatttgacctaggtcacagaatctc
tggtcagcaagacctggctcctgcacatcctcaaattcccctctaacaca
tggatggtcattcctctcttcacttggtagatgatggtcacaggtcctct
ggcatcatgctgactgcagtttgtctcattctcctgatgtgatggatgga
tgtgctcctcctggttctggcttggccaccggctcatctgcttgcggctc
tgctatgg
gaattctcaccctgcaccccctcccaacaggaaacaaacactcacacaaa
aataaaaatttacctgctcagacatgaagttattcaggattgtataaagt
gtcacagttgttgcccaatttaggcttgtaagggccattacacattcggt
gtattcttcacacaaataattagggagaatatcataattttgtaaactcg
aatgcataagactcattaatttattttcccagacacaattttctgctgag
aatttaaatattagagacatatttggtaaaagatcagggttcctgttgat
ttcatttatggaaaaagccaaagccagagcatatttgcgattttcagtct
gagttctgtaaaagtttacagtgtttataattgacagcaacttacaacta
tcatttgtagtcaataaaaggacaaatctgcactggatttcattatcata
gagatgaaatgatctgtgtaatgtggttgagatgacaaagaaggtggaag
atcataaaaccttgagatgttcatgaaagttcacctctcataaatgagat
gtcactacaattagcaataacatgactttccaaagaaagcaaacagaacc
cttagagtccatccattactttcttattttaaagagagagtaaagaactg
gacttcataagttgttaaagccagtgaatttgtatagaccaaaatgtaaa
cttcagagtgggcaaatatcttactttaatttttacacagcatgtgtaca
taaatggggaccacatggagcaaatttatgaaaggtaacaatatatatac
atacacacatatatacatatatatgtatatatatacatatatatgtatat
atatatgtatatatatattcagttactatcagcaatctctatgggcattt
gcctaacacctaaggataagtcgtaagaaaattataggcattcttttgat
aagatacattgctctgtgaaatggaaactgtctagaagagatttttatgt
aactgataaagttcaagatttgtttaatgctaagttccattcctgtaatg
attactgaggaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22651622_22652786
seq2: B6Ng01-007B12.b_45_1202

seq1  GAATTCTCTGTACTGTCTTTGTCCTTACTACTTATGTATCTTTCAGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTACTGTCTTTGTCCTTACTACTTATGTATCTTTCAGAATA  50

seq1  TATGATCACATGGTAAAAAGATCACCACAAGTTTACACATAAATTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCACATGGTAAAAAGATCACCACAAGTTTACACATAAATTCAAAT  100

seq1  CATAAATTAAGAAGTTTACAACAGAGAATGTTTACATGCATATCAACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTAAGAAGTTTACAACAGAGAATGTTTACATGCATATCAACTAG  150

seq1  GAGTAATTATCTGGCTAAAAGTTCATTATCTGTCACTAGCTCAACAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTATCTGGCTAAAAGTTCATTATCTGTCACTAGCTCAACAGGCT  200

seq1  CATTGAAAGTAAAAAAAAAAACATATTTTTTGTGACTAAGTTATTATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAAGTAAAAAAAAAAACATATTTTTTGTGACTAAGTTATTATGGA  250

seq1  AGTTTTCTACTTATAAACCCAGTCAATTTTTTTATCTTCTCTCCTTGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTACTTATAAACCCAGTCAATTTTTTTATCTTCTCTCCTTGCAC  300

seq1  CTATAGTAAATTCTTAGTTCTATTTTTATGACCTTTGGTTAATTGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTAAATTCTTAGTTCTATTTTTATGACCTTTGGTTAATTGTTTTA  350

seq1  TAACCCTTTGGAATATGCTCTCAGTTGTAAAAGCCTGTTTTCTCTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTTTGGAATATGCTCTCAGTTGTAAAAGCCTGTTTTCTCTCTCAG  400

seq1  AAACAATGAACTCTTCTGAAATTTTGAAGACTTGCAGAGTTCTAATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGAACTCTTCTGAAATTTTGAAGACTTGCAGAGTTCTAATTGCA  450

seq1  GTTTTCACATAGGAAAGGTCTTAATAGCAGTCTATTCTTAAAGATCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCACATAGGAAAGGTCTTAATAGCAGTCTATTCTTAAAGATCTTAA  500

seq1  TAATTCCTAATATAATCTTAGGAATTCTTTTATCATCATCATTAAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTAATATAATCTTAGGAATTCTTTTATCATCATCATTAAGAATT  550

seq1  AAGAAATATGGTATCCCTACAAGGGCAGTATATTTTCATTACCCTGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATGGTATCCCTACAAGGGCAGTATATTTTCATTACCCTGCAGA  600

seq1  AATGTGTACAAAGGGTGGACTAATACCCAGTGTTTCTTATATAAATTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTACAAAGGGTGGACTAATACCCAGTGTTTCTTATATAAATTTAA  650

seq1  TAATAACCAAAATAAATTAATAACAGGAATCTTTCCTCCAACTTAATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACCAAAATAAATTAATAACAGGAATCTTTCCTCCAACTTAATCTT  700

seq1  CTCGGCCTTGCCTAAAGAAGCAAATCCGACATCCTTTACAGTTCATGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCCTTGCCTAAAGAAGCAAATCCGACATCCTTTACAGTTCATGAGG  750

seq1  GAACCATCTCAGCAAGATCACCTGCTAGGTTTGAGTTTCTCCTAGATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATCTCAGCAAGATCACCTGCTAGGTTTGAGTTTCTCCTAGATGTC  800

seq1  TCCTGGCATCAGTGGCTTCATGCACAATGCCTGGCTGCTGTTGACTCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCATCAGTGGCTTCATGCACAATGCCTGGCTGCTGTTGACTCCAA  850

seq1  TTTCTCTATATCTGAATGCATGGGTGTGCCCCTCTGGACTCTATGTGGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTCTCTATATCTGAATGCATGGGTGTGCCCCTCTGGACTCTATGGGGAC  900

seq1  ATCCACCCATTCCAATCTTTGTTTTAATTTGACCTAGGTCACAGAATCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCATTCCAATCTTTGTTTTAATTTGACCTAGGTCACAGAATCTC  950

seq1  TGGTCAGCAAGACCTGGCTCCTGCACAT-CTCCAATTCCCCTCTAACAAC  999
      |||||||||||||||||||||||||||| ||| |||||||||||||| ||
seq2  TGGTCAGCAAGACCTGGCTCCTGCACATCCTCAAATTCCCCTCTAAC-AC  999

seq1  ATGGATGGTCATTCCTCTCTTCACTTGGTTAGATGATGGTCACAGGTCCT  1049
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGGATGGTCATTCCTCTCTTCACTTGG-TAGATGATGGTCACAGGTCCT  1048

seq1  CTGGCATCAATGTCTGACTGCAGTTTGTCTCCAATTCTCCTGTATGTGAA  1099
      |||||||| ||| ||||||||||||||||||  ||||||||| ||||| |
seq2  CTGGCATC-ATG-CTGACTGCAGTTTGTCTC--ATTCTCCTG-ATGTG-A  1092

seq1  TGAATGGTTGTGCTCCTCTCTGTTCTGGCTTGGCCACC-GCTCATCCTGC  1148
      || |||| ||||||||||   ||||||||||||||||| |||||| ||||
seq2  TGGATGGATGTGCTCCTCCTGGTTCTGGCTTGGCCACCGGCTCAT-CTGC  1141

seq1  TTGCTGCTCTGCTATGG  1165
      |||| ||||||||||||
seq2  TTGCGGCTCTGCTATGG  1158

seq1: chr17_22738497_22739566
seq2: B6Ng01-007B12.g_66_1129 (reverse)

seq1  TTTTCCATCAGTAAATCATTAACAGGGATGGAAACTTAGCAATAAAACAA  50
      |||||| ||||| ||||||| ||||| |||| |||||||| || ||||||
seq2  TTTTCC-TCAGT-AATCATT-ACAGGAATGG-AACTTAGC-ATTAAACAA  45

seq1  ATCTGAACCTTTATCAGTTACATAAATATCTCTCCTAGACAGTTTCCATT  100
      ||||  | |||||||||||||||||| |||||| ||||||||||||||||
seq2  ATCTTGAACTTTATCAGTTACATAAAAATCTCTTCTAGACAGTTTCCATT  95

seq1  TCACAGAGGCAATGTATCTTATCAAAAGAATGCCTATAAATTTTCTACGA  150
      ||||||| ||||||||||||||||||||||||||||||| |||  |||||
seq2  TCACAGA-GCAATGTATCTTATCAAAAGAATGCCTATAATTTTCTTACGA  144

seq1  CTTTATCC-TAGGTGTTTAGGCAAATGGCCATAGAGATTGCTGATAGTAA  199
      | |||||| |||||| ||||||||||| ||||||||||||||||||||||
seq2  C-TTATCCTTAGGTG-TTAGGCAAATGCCCATAGAGATTGCTGATAGTAA  192

seq1  CTGAATATATATATACATATATATATACATATATATGTATATATATACAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATATATATACATATATATATACATATATATGTATATATATACAT  242

seq1  ATATATGTATATATGTGTGTATGTATATATATTGTTACC-TTCATAAATT  298
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATATATGTATATATGTGTGTATGTATATATATTGTTACCTTTCATAAATT  292

seq1  TGCTCCATGTGGTCCCCATTTATGTACACATGCTGTGTAAAAATTAAAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATGTGGTCCCCATTTATGTACACATGCTGTGTAAAAATTAAAGT  342

seq1  AAGATATTTGCCCACTCTGAAGTTTACATTTTGGTCTATACAAATTCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTGCCCACTCTGAAGTTTACATTTTGGTCTATACAAATTCACT  392

seq1  GGCTTTAACAACTTATGAAGTCCAGTTCTTTACTCTCTCTTTAAAATAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAACAACTTATGAAGTCCAGTTCTTTACTCTCTCTTTAAAATAAG  442

seq1  AAAGTAATGGATGGACTCTAAGGGTTCTGTTTGCTTTCTTTGGAAAGTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATGGATGGACTCTAAGGGTTCTGTTTGCTTTCTTTGGAAAGTCA  492

seq1  TGTTATTGCTAATTGTAGTGACATCTCATTTATGAGAGGTGAACTTTCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTGCTAATTGTAGTGACATCTCATTTATGAGAGGTGAACTTTCAT  542

seq1  GAACATCTCAAGGTTTTATGATCTTCCACCTTCTTTGTCATCTCAACCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCTCAAGGTTTTATGATCTTCCACCTTCTTTGTCATCTCAACCAC  592

seq1  ATTACACAGATCATTTCATCTCTATGATAATGAAATCCAGTGCAGATTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACAGATCATTTCATCTCTATGATAATGAAATCCAGTGCAGATTTG  642

seq1  TCCTTTTATTGACTACAAATGATAGTTGTAAGTTGCTGTCAATTATAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTATTGACTACAAATGATAGTTGTAAGTTGCTGTCAATTATAAAC  692

seq1  ACTGTAAACTTTTACAGAACTCAGACTGAAAATCGCAAATATGCTCTGGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAACTTTTACAGAACTCAGACTGAAAATCGCAAATATGCTCTGGC  742

seq1  TTTGGCTTTTTCCATAAATGAAATCAACAGGAACCCTGATCTTTTACCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTTCCATAAATGAAATCAACAGGAACCCTGATCTTTTACCAA  792

seq1  ATATGTCTCTAATATTTAAATTCTCAGCAGAAAATTGTGTCTGGGAAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTCTAATATTTAAATTCTCAGCAGAAAATTGTGTCTGGGAAAAT  842

seq1  AAATTAATGAGTCTTATGCATTCGAGTTTACAAAATTATGATATTCTCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATGAGTCTTATGCATTCGAGTTTACAAAATTATGATATTCTCCC  892

seq1  TAATTATTTGTGTGAAGAATACACCGAATGTGTAATGGCCCTTACAAGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTGTGTGAAGAATACACCGAATGTGTAATGGCCCTTACAAGCC  942

seq1  TAAATTGGGCAACAACTGTGACACTTTATACAATCCTGAATAACTTCATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGGCAACAACTGTGACACTTTATACAATCCTGAATAACTTCATG  992

seq1  TCTGAGCAGGTAAATTTTTATTTTTGTGTGAGTGTTTGTTTCCTGTTGGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCAGGTAAATTTTTATTTTTGTGTGAGTGTTTGTTTCCTGTTGGG  1042

seq1  AGGGGGTGCAGGGTGAGAATTC  1070
      ||||||||||||||||||||||
seq2  AGGGGGTGCAGGGTGAGAATTC  1064