BAC Information

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BAC

Clone NameB6Ng01-008D04
Chromosome17 (Build37)
Map Location 38,658,374 - 38,659,555
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008D04.bB6Ng01-008D04.g
ACCDH844536DH844537
length1,2481,158
definitionDH844536|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D04, 5' end.DH844537|Mus musculus domesticus DNA, BAC clone: B6Ng01-008D04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgaaggtctgatagaactctgcaataaacccacctacctctg
ggttgtttgtttgtttgtttgtttgtttgttttttgcttagagactattg
attactacttctatttctttaggggagttgggactctttagatagataat
ctgatcctagtttaactttggtacctggtatctgtctaggaagttgtcca
tttcatccaggttttctagttttgttgacttttgtagtagccttttgtag
taggatcagaagatgttttggatttcctcaggttctgttgttatatttcc
tttttcatttttgattttgttaattagtatactgtgcctgtgcctgctag
ttactctggctaagtgtttagctctgttgttgattttctcaaataaccag
cccctgctttggttgattctttgtgtagttgttttttttccacttagttg
atttcagtcccacaaaaatcagggactaaagaaggctgcccacttttgcc
ccacctattcaatagtatatgaagttctagccagggcaattcgacaacaa
aaggtgatcacaataatacaaattggaaaggaagaaatcaaaatatcagt
atttgcagatgatatgataatatatataagtgaccccaaaaattccacta
gagaattcctgaacctgataaacagcttcagtgcagaacctgtttataaa
ataaattcaaacaaataaatggactttcccaccaaaaaggataaacagac
tgagaaataaattagggaaacaacaccctttacaatagtcacaaaaaaaa
tataaaataccttgatgtgaatctaaggaagtgaaagatctgtatgacaa
tacttcaagtctctgaagaaagaaattaagatctcagaagatggaaagat
ccccatgctcatggattggcataattatatagtaaaatggctatcctccc
gaaagcaatcacagattcaatgcatcccatcaaattccaactcaattctt
cactgagtagaagggcatttgcagttcattagaataataaaatcatagat
aggcaaacattctcacgataaagaacctatgtggatcaccctgccatatt
aaactgtactacagagccatgtgataagctggcattactggtacattgac
agacagtgatcttgaatagaataagaacccgataatcgtacacctgtacc
tgacttgcagaggctactcactgtggatagaagagcacgcttctttga
gaattcacaggacagctttcaaagcagatattttaaaaatacactgttag
agatagctatagattactaaaattaaatatgactaaatgtataaataaag
atgcacatgtctgaaaaccatttcagtccatttgtaaatatttctttaag
gatagatcacacaatgtaatcagtggcatggtttttaatggtatacatag
acagacatagatactcctttagctatgaccaattctaccggtatctaacc
tggttaaataattactttattactgtctgttacagaaatgtaatggaagt
gattcatggaggagaatgtgtggcttaagcaggtgcatcacttcatctca
ccatggctgacaactctcattctacaggaagttcctgcatacatgtatgt
tcctgtgctaatagtaagcagctcctatgaaaatgttaccttttcatagc
aagtgaaaattgtatctttctgggatccctgaaacctgtgtcagtttcac
aaacttcttgagtctattgagcttccttcttgcacgaggggcacctcctc
caattttaggaaagaactaccagataataactcataaaatccatcccagt
aaatacaataagcatgcttaaaaaaagcccttcagcacacaaatgttttt
aatttaaaaatcaaaatgtatgaaatatcaggtgtattatcactagtttg
ataactttcaaatcatgtatcaaatatgattgaatattttggtttaacta
gcttataaaatttcaataaatggtacaagcaaataataatacacaatgtg
caatgtgaagtagatatataatatttatgaaaattattgacagactcata
gtaaaaacaatatcaatgaggatggggatgaggctcagggtaaaatgcct
ttcatgcatgatggatttgaatttggaaatctaaacaaccaacaaacaaa
caaaaacataaacagtagtatgctgccatactattacttcaggtttggaa
ggtaagaaagtatgtccaagaaggttctggaaaacagtgtacatcagaag
ctcgattttacttgagagaaaaaatctcataaacatgatggggagcagtt
cctccaatccacgagatcgatccggtttataaaatggtgttcgattacct
gctgttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38658374_38659555
seq2: B6Ng01-008D04.g_67_1224

seq1  GAATTCACAGGACAGCTTTCAAAGCAGATATTTTAAAAATACACTGTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGACAGCTTTCAAAGCAGATATTTTAAAAATACACTGTTAG  50

seq1  AGATAGCTATAGATTACTAAAATTAAATATGACTAAATGTATAAATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCTATAGATTACTAAAATTAAATATGACTAAATGTATAAATAAAG  100

seq1  ATGCACATGTCTGAAAACCATTTCAGTCCATTTGTAAATATTTCTTTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGTCTGAAAACCATTTCAGTCCATTTGTAAATATTTCTTTAAG  150

seq1  GATAGATCACACAATGTAATCAGTGGCATGGTTTTTAATGGTATACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATCACACAATGTAATCAGTGGCATGGTTTTTAATGGTATACATAG  200

seq1  ACAGACATAGATACTCCTTTAGCTATGACCAATTCTACCGGTATCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATAGATACTCCTTTAGCTATGACCAATTCTACCGGTATCTAACC  250

seq1  TGGTTAAATAATTACTTTATTACTGTCTGTTACAGAAATGTAATGGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAATAATTACTTTATTACTGTCTGTTACAGAAATGTAATGGAAGT  300

seq1  GATTCATGGAGGAGAATGTGTGGCTTAAGCAGGTGCATCACTTCATCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGGAGGAGAATGTGTGGCTTAAGCAGGTGCATCACTTCATCTCA  350

seq1  CCATGGCTGACAACTCTCATTCTACAGGAAGTTCCTGCATACATGTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTGACAACTCTCATTCTACAGGAAGTTCCTGCATACATGTATGT  400

seq1  TCCTGTGCTAATAGTAAGCAGCTCCTATGAAAATGTTACCTTTTCATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTAATAGTAAGCAGCTCCTATGAAAATGTTACCTTTTCATAGC  450

seq1  AAGTGAAAATTGTATCTTTCTGGGATCCCTGAAACCTGTGTCAGTTTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAATTGTATCTTTCTGGGATCCCTGAAACCTGTGTCAGTTTCAC  500

seq1  AAACTTCTTGAGTCTATTGAGCTTCCTTCTTGCACGAGGGGCACCTCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTGAGTCTATTGAGCTTCCTTCTTGCACGAGGGGCACCTCCTC  550

seq1  CAATTTTAGGAAAGAACTACCAGATAATAACTCATAAAATCCATCCCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAGGAAAGAACTACCAGATAATAACTCATAAAATCCATCCCAGT  600

seq1  AAATACAATAAGCATGCTTAAAAAAAGCCCTTCAGCACACAAATGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATAAGCATGCTTAAAAAAAGCCCTTCAGCACACAAATGTTTTT  650

seq1  AATTTAAAAATCAAAATGTATGAAATATCAGGTGTATTATCACTAGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAATCAAAATGTATGAAATATCAGGTGTATTATCACTAGTTTG  700

seq1  ATAACTTTCAAATCATGTATCAAATATGATTGAATATTTTGGTTTAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTCAAATCATGTATCAAATATGATTGAATATTTTGGTTTAACTA  750

seq1  GCTTATAAAATTTCAATAAATGGTACAAGCAAATAATAATACACAATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAAAATTTCAATAAATGGTACAAGCAAATAATAATACACAATGTG  800

seq1  CAATGTGAAGTAGATATATAATATTTATGAAAATTATTGACAGACTCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGAAGTAGATATATAATATTTATGAAAATTATTGACAGACTCATA  850

seq1  GTAAAAACAATATCAATGAGGATGGGGATGAGGCTCAGGGTAAAATGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACAATATCAATGAGGATGGGGATGAGGCTCAGGGTAAAATGCCT  900

seq1  TTCATGCATGATGGATTTGAATTTGGAAATCTAAAACAAACAAACAAACA  950
      |||||||||||||||||||||||||||||||||||   ||| ||||||||
seq2  TTCATGCATGATGGATTTGAATTTGGAAATCTAAA--CAACCAACAAACA  948

seq1  AACAAAAACATAAAACAGTAAGTATGCTGCCATACTATTACTTCAGGTTT  1000
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AACAAAAACAT-AAACAGT-AGTATGCTGCCATACTATTACTTCAGGTTT  996

seq1  GGAAGGGTAAGAAAGTTATGTCCAAGAA-GTTCTGGAAAAACAAGTGTAA  1049
      |||| |||||||||| |||||||||||| |||||||||||   |||||| 
seq2  GGAA-GGTAAGAAAG-TATGTCCAAGAAGGTTCTGGAAAA--CAGTGTA-  1041

seq1  CAATCAGGAAGCTCGAATTTTAC-TGAGAGAAAAAAATCTCAATAAACAT  1098
        |||| |||||||| ||||||| |||||| |||||||||| ||||||||
seq2  -CATCA-GAAGCTCG-ATTTTACTTGAGAG-AAAAAATCTC-ATAAACAT  1086

seq1  GATGGGGAGCAGTTCCTCC-ATCCACAGAAGATCAGAAAATCACAGTTTT  1147
      ||||||||||||||||||| ||||||   ||||| ||      | | |||
seq2  GATGGGGAGCAGTTCCTCCAATCCAC--GAGATC-GA-----TCCGGTTT  1128

seq1  ATTAAAAATGGTGGTACAGATTACCCTGCTGTTAT  1182
      ||  ||||||||| |   ||||| |||||||||||
seq2  AT--AAAATGGTGTT--CGATTA-CCTGCTGTTAT  1158