BAC Information

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BAC

Clone NameB6Ng01-010O22
Chromosome17 (Build37)
Map Location 61,220,795 - 61,357,200
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010O22.bB6Ng01-010O22.g
ACCDH846458DH846459
length1,039595
definitionDH846458|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O22, 5' end.DH846459|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,220,795 - 61,221,848)(61,356,606 - 61,357,200)
sequence
gaattcctgaaaccaacacaagctaccagaagatggaagccaaaggaaca
cacaggaagactcatgttgtatagacatccttccttcagacatctggtct
ctgggccatttgggaaaaaaatcagtctttaaattaatgatatcttgtta
gagcagcaaagaggaaaataagacagaatatataggctcccatgcagtta
cacataggcacctatgcagccacacagcttagtggcttttttttttttaa
ttagatagtttctttatttacatttcaaatgttatcccctttcctggttc
ccctccgaaaacccaactattccatcgccatgcccctgctcactaagcca
cccactcctgcctccctatcctggcatttccctatactggggtattgagc
cttctcaggcccaagggcctctcctgatgtcccacaagtccatcttctgt
tacatatgtggctggaacattaagtatctccatgtgtacgctttggttgt
tggtttagtccctgggagctctgcaggtattctttggttcatattgttgt
tcctcctatggggctgtaaaccccttcagctccttgggtactttctctag
ctcctccgttggggactctactcagtccaatggatgactgtgagcaccca
cttctgtaattgtcaggtactgacaaagtctatcagaagacagctatatc
aggctcctgtcagcaagcacttgttggcatccacaatagtgtctgggttt
ggcaaatatatatgagatggatccccaagtgggacagtcactggatggcc
tttgcttcagtttctgctccgaactttttctctgtatctactcccattgg
tattttgataccccttctaagaaggatctaagtctgtttttttcttttta
tagttcatgtacctgaaatttggtaaagagcaatatgacttcttcagaga
ttctgataaatagtgctggagtctgagtaggagtctaactcagttacaaa
ctcccagcattttatagccctcatactatcatgatgcaa
gaattcctgatacacaaatccacagctagaaaaatggtacgtgatgttcc
taaattgatatgaccttgataaaagaaatgttatagttgtgtctatttaa
ctttgaacgtgctgttgccataggaagcaagtttgcaacagtgagaaagc
gaagggttaaacagccttggcagaattcagtaattatatatattgattac
tttaaaacatcattgagctgacaggataagaaaagcccacttgtctcact
gtttgggccttttatttctcacaagatggatgagttaataaacagggagc
aagcactcccataaattcagcatctgtaatatttgtcaccttcggaatta
ctcggatgagagtaacatcctttatgtgaattcactggagagggctagca
gactttccttccctttgaatctgtgttgcgcggtgtgattaatgctatgt
tgatgtttaaagaggcagcgtcattagaagaaaatgagatgagaaaaaag
catgtttcctgcccagtaagtcctaagtatgctgtgtcatcatatgggtt
ttacttctgcttagagaacagtttggctctgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61220795_61221848
seq2: B6Ng01-010O22.b_48_1086

seq1  GAATTCCTGAAACCAACACAAGCTACCAGAAGATGGAAGCCAAAGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAACCAACACAAGCTACCAGAAGATGGAAGCCAAAGGAACA  50

seq1  CACAGGAAGACTCATGTTGTATAGACATCCTTCCTTCAGACATCTGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAGACTCATGTTGTATAGACATCCTTCCTTCAGACATCTGGTCT  100

seq1  CTGGGCCATTTGGGAAAAAAATCAGTCTTTAAATTAATGATATCTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCATTTGGGAAAAAAATCAGTCTTTAAATTAATGATATCTTGTTA  150

seq1  GAGCAGCAAAGAGGAAAATAAGACAGAATATATAGGCTCCCATGCAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCAAAGAGGAAAATAAGACAGAATATATAGGCTCCCATGCAGTTA  200

seq1  CACATAGGCACCTATGCAGCCACACAGCTTAGTGGCTTTTTTTTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGCACCTATGCAGCCACACAGCTTAGTGGCTTTTTTTTTTTTAA  250

seq1  TTAGATAGTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCTGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCTGGTTC  300

seq1  CCCTCCGAAAACCCAACTATTCCATCGCCATGCCCCTGCTCACTAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGAAAACCCAACTATTCCATCGCCATGCCCCTGCTCACTAAGCCA  350

seq1  CCCACTCCTGCCTCCCTATCCTGGCATTTCCCTATACTGGGGTATTGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTGCCTCCCTATCCTGGCATTTCCCTATACTGGGGTATTGAGC  400

seq1  CTTCTCAGGCCCAAGGGCCTCTCCTGATGTCCCACAAGTCCATCTTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGGCCCAAGGGCCTCTCCTGATGTCCCACAAGTCCATCTTCTGT  450

seq1  TACATATGTGGCTGGAACATTAAGTATCTCCATGTGTACGCTTTGGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGTGGCTGGAACATTAAGTATCTCCATGTGTACGCTTTGGTTGT  500

seq1  TGGTTTAGTCCCTGGGAGCTCTGCAGGTATTCTTTGGTTCATATTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGTCCCTGGGAGCTCTGCAGGTATTCTTTGGTTCATATTGTTGT  550

seq1  TCCTCCTATGGGGCTGTAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTATGGGGCTGTAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAG  600

seq1  CTCCTCCGTTGGGGACTCTACTCAGTCCAATGGATGACTGTGAGCACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCGTTGGGGACTCTACTCAGTCCAATGGATGACTGTGAGCACCCA  650

seq1  CTTCTGTAATTGTCAGGTACTGACAAAGTCTATCAGAAGACAGCTATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAATTGTCAGGTACTGACAAAGTCTATCAGAAGACAGCTATATC  700

seq1  AGGCTCCTGTCAGCAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCTGTCAGCAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTTT  750

seq1  GGCAAATATATATGAGATGGATCCCCAAGTGGGACAGTCACTGGATGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATATATATGAGATGGATCCCCAAGTGGGACAGTCACTGGATGGCC  800

seq1  TTTGCTTCAGTTTCTGCTCCGAACTTTTTCTCTGTATCTACTCCCATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCAGTTTCTGCTCCGAACTTTTTCTCTGTATCTACTCCCATTGG  850

seq1  TATTTTGATACCCCTTCTAAGAAGGATCTAAGTCTGTTTTTTTTCTTTTT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTTTGATACCCCTTCTAAGAAGGATCTAAGTCTG-TTTTTTTCTTTTT  899

seq1  AATAGTTCAATGTACCTGAAATTTTGGTAAAAGAGCAAATAATGACTTCT  950
       ||||||| |||||||||||| |||||| |||||||||   |||||||||
seq2  -ATAGTTC-ATGTACCTGAAA-TTTGGT-AAAGAGCAA--TATGACTTCT  943

seq1  TCAGAGAATTCTGATAAATAGTGCTGGAGTCCTGAGTAGGAGTCTAAACT  1000
      |||||| ||||||||||||||||||||||| |||||||||||||| ||||
seq2  TCAGAG-ATTCTGATAAATAGTGCTGGAGT-CTGAGTAGGAGTCT-AACT  990

seq1  CAGTTACAAACTCCACAGCATTTTATATAGCACTCATACTAATCATGAAT  1050
      |||||||||||||| ||||||||  |||||| |||||||| |||||| ||
seq2  CAGTTACAAACTCC-CAGCATTT--TATAGCCCTCATACT-ATCATG-AT  1035

seq1  GCAA  1054
      ||||
seq2  GCAA  1039

seq1: chr17_61356606_61357200
seq2: B6Ng01-010O22.g_68_662 (reverse)

seq1  CACACACACACACACAGAGCCAAACTGTTCTCTAAGCAGAAGTAAAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAGAGCCAAACTGTTCTCTAAGCAGAAGTAAAACCC  50

seq1  ATATGATGACACAGCATACTTAGGACTTACTGGGCAGGAAACATGCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGACACAGCATACTTAGGACTTACTGGGCAGGAAACATGCTTTT  100

seq1  TTCTCATCTCATTTTCTTCTAATGACGCTGCCTCTTTAAACATCAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCTCATTTTCTTCTAATGACGCTGCCTCTTTAAACATCAACATA  150

seq1  GCATTAATCACACCGCGCAACACAGATTCAAAGGGAAGGAAAGTCTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAATCACACCGCGCAACACAGATTCAAAGGGAAGGAAAGTCTGCTA  200

seq1  GCCCTCTCCAGTGAATTCACATAAAGGATGTTACTCTCATCCGAGTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCCAGTGAATTCACATAAAGGATGTTACTCTCATCCGAGTAATT  250

seq1  CCGAAGGTGACAAATATTACAGATGCTGAATTTATGGGAGTGCTTGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGGTGACAAATATTACAGATGCTGAATTTATGGGAGTGCTTGCTCC  300

seq1  CTGTTTATTAACTCATCCATCTTGTGAGAAATAAAAGGCCCAAACAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATTAACTCATCCATCTTGTGAGAAATAAAAGGCCCAAACAGTGA  350

seq1  GACAAGTGGGCTTTTCTTATCCTGTCAGCTCAATGATGTTTTAAAGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTGGGCTTTTCTTATCCTGTCAGCTCAATGATGTTTTAAAGTAAT  400

seq1  CAATATATATAATTACTGAATTCTGCCAAGGCTGTTTAACCCTTCGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATATAATTACTGAATTCTGCCAAGGCTGTTTAACCCTTCGCTTT  450

seq1  CTCACTGTTGCAAACTTGCTTCCTATGGCAACAGCACGTTCAAAGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTTGCAAACTTGCTTCCTATGGCAACAGCACGTTCAAAGTTAAA  500

seq1  TAGACACAACTATAACATTTCTTTTATCAAGGTCATATCAATTTAGGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAACTATAACATTTCTTTTATCAAGGTCATATCAATTTAGGAAC  550

seq1  ATCACGTACCATTTTTCTAGCTGTGGATTTGTGTATCAGGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACGTACCATTTTTCTAGCTGTGGATTTGTGTATCAGGAATTC  595