BAC Information

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BAC

Clone NameB6Ng01-011K19
Chromosome17 (Build37)
Map Location 49,402,614 - 49,403,083
singlet/doubletsinglet
Overlap genenone
Upstream geneTreml4, Treml2, B430306N03Rik, Trem2, Treml1, Nfya, AI314976, Apobec2, Bzrpl1, Unc5cl, Lrfn2, 1700008K24Rik, LOC672972
Downstream geneMocs1, Daam2, Kif6, EG668470, Rftn1, EG668475, EG628747, LOC100043818
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011K19.bB6Ng01-011K19.g
ACCDH846992DH846993
length469780
definitionDH846992|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K19, 5' end.DH846993|Mus musculus domesticus DNA, BAC clone: B6Ng01-011K19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ccagggcttgtagactcagctgaattacagatcatcatagtccatgagac
acactggagacagagagagaggaagacagagacagagacacagagagaga
cagagagaggagaagaaaggagggatagagggagggaggcgaattctact
tggggaaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg
aaggaaggaaaagctcctatgtagcaggctctgtctagcacagtggacat
gggactttgggacatgaatggatcatgagggtaccagtctccatgggttg
attcataacttgatggcatgattgtgagcttttgtaaatgccagacagtg
ggacctaatttaaggaaccaggtcactaggaggtatgtttttttaaggat
gtcctttgtcctgctttttttggggggggggggcaccccccccccctctg
tctcaaggcccctgtcatg
gaattctgaaattttggttccttttaaaaacacagaagtattctgagaaa
gtgttcttgttttgatcccaggtgtggggatatgggactgcttcagattg
tccatagcagttgaccatgatttgttgcgtgtagcttttgctaccacgcc
taagctctgggaatgggccacactcccagcctctacccagattcctttga
attcacagataaaaaccatagagacatacattgttcaatttcaacctttt
tggcccagttgctgggtggtgcttattccctgcctggagaagcatgccct
tatcaatactcttagctgagcacctcttcacctgagctcaactttaattg
ctcagttatatctagtcccagctaaacactcccaactgcctgcctgtagg
agtggcctgtggccactttgtctgaggtctctcgtgactggtcacctttt
ctccctcagaagcatggcaaattctctctttcactcttctctccttgtgt
ctgtctgcttgcctccaggaacctggaagtcctgcctattccttctgccc
agcaattggcccatggcttctttactgacagatcaagaaccagttgggga
acaggaccttaacatcagaactatccctacaatgatttgcctcttgctct
gagtgggctgtgattttgccagctgcagatagtttctgggattatgtgat
gtttggaattctggagacttttcagagggtacatcaatgggccccaagag
atggatgggttgtttttggttgtggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_49402614_49403083
seq2: B6Ng01-011K19.b_47_521

seq1  GAATTCCCAGGGCTTGTAGACTCAGCTGAATTACTGATCATCATAGTCCA  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATTCCCAGGGCTTGTAGACTCAGCTGAATTACAGATCATCATAGTCCA  50

seq1  TGAGACACACTGGAGACAGAGAGAGAGGAAGACAGAGACAGAGACACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACACACTGGAGACAGAGAGAGAGGAAGACAGAGACAGAGACACAGA  100

seq1  GAGAGACAGAGAGAGGAGAAGAAAGGAGGGATAGAGGGAGGGAGGCGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGAGAGGAGAAGAAAGGAGGGATAGAGGGAGGGAGGCGAAT  150

seq1  GGAAGCAAAGG-AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  199
         |     || ||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTGGGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  200

seq1  GGAAGGAAGGAAGGAAAAGCTCCTATGTAGCAGGCTCTGTCTAGCACAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAAAGCTCCTATGTAGCAGGCTCTGTCTAGCACAGT  250

seq1  GGACATGGGACTTTGGGACATGAATGGATCATGAGGGTACCAGTCTCCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGGACTTTGGGACATGAATGGATCATGAGGGTACCAGTCTCCAT  300

seq1  GGGTTGATTCATAACTTGATGGCATGATTGTGAGCTTTTGTAAATGCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGATTCATAACTTGATGGCATGATTGTGAGCTTTTGTAAATGCCAG  350

seq1  ACAGTGGGACCTAATTTAAGGAACCAGGTCACTAGGAGGTATG-CCCATG  398
      |||||||||||||||||||||||||||||||||||||||||||     | 
seq2  ACAGTGGGACCTAATTTAAGGAACCAGGTCACTAGGAGGTATGTTTTTTT  400

seq1  AAGGATGTCCTTTGTCCTGCTAT------AAAGGGAGAGCACACAACGCA  442
      ||||||||||||||||||||| |         ||| | |||| |  | | 
seq2  AAGGATGTCCTTTGTCCTGCTTTTTTTGGGGGGGGGGGGCACCCCCCCC-  449

seq1  GTGCCTCTGTCTCATGGCCCCTGTCATG  470
         ||||||||||| |||||||||||||
seq2  --CCCTCTGTCTCAAGGCCCCTGTCATG  475