BAC Information

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BAC

Clone NameB6Ng01-011M15
Chromosome17 (Build37)
Map Location 69,469,143 - 69,620,748
singlet/doubletdoublet
Overlap geneEpb4.1l3
Upstream geneD930040M24Rik, EG622645
Downstream gene2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011M15.bB6Ng01-011M15.g
ACCDH847074DH847075
length8931,064
definitionDH847074|Mus musculus domesticus DNA, BAC clone: B6Ng01-011M15, 5' end.DH847075|Mus musculus domesticus DNA, BAC clone: B6Ng01-011M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,469,143 - 69,470,033)(69,619,695 - 69,620,748)
sequence
ctcatttgctaacaaaataatgaaatgggtcagaatcagtggttgctgcg
atagtgtgagaatgtggttatttcatttaacatatctaacccatgtagca
catgtgttctaagaattttagatctgcctaactgatccacatatactcct
ctggtgtgtatataggaaataaattaggttattggctagtttttctgtgc
attaattcccagtggcattataggtaaagagtttgtgcataaaagacttg
atcaagccgggcagtggtggcacacgcctttaatcccagcacttgggagg
cagaggcaggcagatttctgagttcgaggccagcctggtctacagagtga
gttccaggacagccagggctatacagagaaactctgtctcaaaacaaaac
aaaacaaaacaaacaaacaaacaaacaaacaaaaatagacttgatcaaga
tcagaaacatgctgatgaaactcatgagaattgtgttttacagccatgcc
tctgaaacgttttcagcacatacgtttcaaaggtagttactgttggcaga
tgacagcctgactctcctcttctaagctgcctgtggttagtgacgggcct
tggtggaatcactacagcaatgaacaccatgttggcttcatatcctgtgc
agatatgctaatatatctggggaaagggattgaggaaaaggaggcaaaag
agaggtgcttctgccacgtttttctggtggcaaccttctcagcttctagt
cagctaccctgggatcatattctgaaaacagagacggagcaaaagctgtt
gggttcaggactatgtggctgtctagagatatacatgtgacctcagagaa
tggcagtgagctcagatgcctgggagtgtttggatgggtggga
gaattcatttcctgggagtgacttgtgtgatagccaagggctcgaaaatg
tgttaagtattactttaataagtattagatggccaccggggatttaaaaa
tatatctgtatccagccaataagctaattcaattacccatgaatcttcgt
cctcatctgtcatggctgctagtatacacagactcctatctgagacagga
gaatcactgtctacctctctttcctccccgcctggtccacttttgtcttt
aaggtactgtcagttagataacagtttctcaaaatgtaatcccaagacca
agagtccagacattgggaaccagttagaactacaaatctccatcttgcct
cagccctttagagccagaagcaggaagagagggtcattcagatcactctg
atggaagtgggggtttgaggcccactggcttagatgagaacaaacaaact
gaaaactaaaagtgcagttaagagcattggctgctcttcctgaggtcctg
agttaattcccagcactcacatggtggctcacaaccatctgtaatgggat
ctgacaccctcttctggtgtgtctgaagacagagtactcatacacttaaa
taaataattcttttaaaaaaaatggtaacaacaacaacaacaaaatctgg
gtttctgcccaaagccagcatttcttttcagtgggagtcacccccagcgc
atacgtgctaggaaccttctgcccatgtttggactttatccttacctccg
tggcactggtctctccatcagctgcagtgtctgtccgttcactgtcagtc
tgtggatcacagaagaattagatccaaggagaaagcagggatagaaaaca
aatcggtcctggttagacaaagcgcacaggtgggaccaattcacgctctt
tctctgggattctgtggcatcctacttcctcacgggggcacgggtatgag
cgaagcaaagagaggccgagcttggggtcttcagcagagccccttcaagg
tcaagaatcgaggcacacgcacagtgggccaccttgaactgccttgcgtt
tacagtgaaaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69469143_69470033
seq2: B6Ng01-011M15.b_52_944

seq1  CTCATTTGCTAACAAAATAATGAAATGGGTCAGAATCAGTGGTTGCTGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGCTAACAAAATAATGAAATGGGTCAGAATCAGTGGTTGCTGCG  50

seq1  ATAGTGTGAGAATGTGGTTATTTCATTTAACATATCTAACCCATGTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGAGAATGTGGTTATTTCATTTAACATATCTAACCCATGTAGCA  100

seq1  CATGTGTTCTAAGAATTTTAGATCTGCCTAACTGATCCACATATACTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTCTAAGAATTTTAGATCTGCCTAACTGATCCACATATACTCCT  150

seq1  CTGGTGTGTATATAGGAAATAAATTAGGTTATTGGCTAGTTTTTCTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGTATATAGGAAATAAATTAGGTTATTGGCTAGTTTTTCTGTGC  200

seq1  ATTAATTCCCAGTGGCATTATAGGTAAAGAGTTTGTGCATAAAAGACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCCCAGTGGCATTATAGGTAAAGAGTTTGTGCATAAAAGACTTG  250

seq1  ATCAAGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGG  300

seq1  CAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGA  350

seq1  GTTCCAGGACAGCCAGGGCTATACAGAGAAACTCTGTCTCAAAACAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGGACAGCCAGGGCTATACAGAGAAACTCTGTCTCAAAACAAAAC  400

seq1  AAAACAAAACAAACAAACAAACAAACAAACAAAAATAGACTTGATCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAACAAACAAACAAACAAACAAAAATAGACTTGATCAAGA  450

seq1  TCAGAAACATGCTGATGAAACTCATGAGAATTGTGTTTTACAGCCATGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAACATGCTGATGAAACTCATGAGAATTGTGTTTTACAGCCATGCC  500

seq1  TCTGAAACGTTTTCAGCACATACGTTTCAAAGGTAGTTACTGTTGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACGTTTTCAGCACATACGTTTCAAAGGTAGTTACTGTTGGCAGA  550

seq1  TGACAGCCTGACTCTCCTCTTCTAAGCTGCCTGTGGTTAGTGACGGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCCTGACTCTCCTCTTCTAAGCTGCCTGTGGTTAGTGACGGGCCT  600

seq1  TGGTGGAATCACTACAGCAATGAACACCATGTTGGCTTCATATCCTGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAATCACTACAGCAATGAACACCATGTTGGCTTCATATCCTGTGC  650

seq1  AGATATGCTAATATATCTGGGGAAAGGGATTGAGGAAAAGGAGGCAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGCTAATATATCTGGGGAAAGGGATTGAGGAAAAGGAGGCAAAAG  700

seq1  AGAGGTGCTTCTGCCACGTTTTTCTGGTGGCAACCTTCTCAGCTTCTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGCTTCTGCCACGTTTTTCTGGTGGCAACCTTCTCAGCTTCTAGT  750

seq1  CAGCTACCCT-GGATCATATTCTGAAAACAGAGACGGAGCAAAAGCTGTT  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACCCTGGGATCATATTCTGAAAACAGAGACGGAGCAAAAGCTGTT  800

seq1  -GGTTCAGGACTATGTGGCTGTCTAGAGATATACATGTGACCTCAGAGAA  848
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCAGGACTATGTGGCTGTCTAGAGATATACATGTGACCTCAGAGAA  850

seq1  TGGCAGTGAGCTCAGATGCCTGGGAGTGTGTGGATGGGTGGGA  891
      ||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGCAGTGAGCTCAGATGCCTGGGAGTGTTTGGATGGGTGGGA  893

seq1: chr17_69619695_69620748
seq2: B6Ng01-011M15.g_67_1123 (reverse)

seq1  CACTGTAAACGC-AGGCAGGTCAGGGTGGCCCACTGTGCGTGTGCCTCGG  49
      |||||||||||| |||||| ||| ||||||||||||||||||||||||| 
seq2  CACTGTAAACGCAAGGCAGTTCAAGGTGGCCCACTGTGCGTGTGCCTCGA  50

seq1  GTCTTGACCTTGGAGGGGCTCTGCTGAAGACCCCAAGCTCGGCCTCTCCT  99
       ||||||||||| |||||||||||||||||||||||||||||||||| ||
seq2  TTCTTGACCTTGAAGGGGCTCTGCTGAAGACCCCAAGCTCGGCCTCT-CT  99

seq1  TTGCTTCGCTCATACCCGTGCCCCCGTGGGAAGGTAGGATGCCACAG-AT  148
      |||||||||||||||||||||||||||| | | |||||||||||||| ||
seq2  TTGCTTCGCTCATACCCGTGCCCCCGTGAGGAAGTAGGATGCCACAGAAT  149

seq1  CCCAGAGAAAGAGCGTGAA-TGGTCCCACCTGTGCGCTTTGTCTAACCA-  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  CCCAGAGAAAGAGCGTGAATTGGTCCCACCTGTGCGCTTTGTCTAACCAG  199

seq1  GACCGGTTTGTTTTCTATCCCTGCTTTCTCCTTGGATCTGATTTCTTCTG  246
      ||||| ||||||||||||||||||||||||||||||||| | ||||||||
seq2  GACCGATTTGTTTTCTATCCCTGCTTTCTCCTTGGATCT-AATTCTTCTG  248

seq1  TGATCCACAGACTGACAGTGAACGGACAGACACTGCAGCTGATGGAGAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCACAGACTGACAGTGAACGGACAGACACTGCAGCTGATGGAGAGA  298

seq1  CCAGTGCCACGGAGGTGAGGATAAAGTCCAAACATGGGCAGAAGGTTCCT  346
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAGTGCCACGGAGGTAAGGATAAAGTCCAAACATGGGCAGAAGGTTCCT  348

seq1  AGCACGTATGCGCTGGGGGTGACTCCCACTGAAAAGAAATGCTGGCTTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGTATGCGCTGGGGGTGACTCCCACTGAAAAGAAATGCTGGCTTTG  398

seq1  GGCAGAAA-CCAGATTTTGTTGTTGTTGTTGTTACCATTTTTTTTAAAAG  445
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAACCCAGATTTTGTTGTTGTTGTTGTTACCATTTTTTTTAAAAG  448

seq1  AATTATTTATTTAAGTGTATGAGTACTCTGTCTTCAGACACACCAGAAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTATTTAAGTGTATGAGTACTCTGTCTTCAGACACACCAGAAGA  498

seq1  GGGTGTCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGAGTGCTGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGAGTGCTGG  548

seq1  GAATTAACTCAGGACCTCAGGAAGAGCAGCCAATGCTCTTAACTGCACTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAACTCAGGACCTCAGGAAGAGCAGCCAATGCTCTTAACTGCACTT  598

seq1  TTAGTTTTCAGTTTGTTTGTTCTCATCTAAGCCAGTGGGCCTCAAACCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTCAGTTTGTTTGTTCTCATCTAAGCCAGTGGGCCTCAAACCCC  648

seq1  CACTTCCATCAGAGTGATCTGAATGACCCTCTCTTCCTGCTTCTGGCTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCATCAGAGTGATCTGAATGACCCTCTCTTCCTGCTTCTGGCTCT  698

seq1  AAAGGGCTGAGGCAAGATGGAGATTTGTAGTTCTAACTGGTTCCCAATGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCTGAGGCAAGATGGAGATTTGTAGTTCTAACTGGTTCCCAATGT  748

seq1  CTGGACTCTTGGTCTTGGGATTACATTTTGAGAAACTGTTATCTAACTGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTCTTGGTCTTGGGATTACATTTTGAGAAACTGTTATCTAACTGA  798

seq1  CAGTACCTTAAAGACAAAAGTGGACCAGGCGGGGAGGAAAGAGAGGTAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCTTAAAGACAAAAGTGGACCAGGCGGGGAGGAAAGAGAGGTAGA  848

seq1  CAGTGATTCTCCTGTCTCAGATAGGAGTCTGTGTATACTAGCAGCCATGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATTCTCCTGTCTCAGATAGGAGTCTGTGTATACTAGCAGCCATGA  898

seq1  CAGATGAGGACGAAGATTCATGGGTAATTGAATTAGCTTATTGGCTGGAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAGGACGAAGATTCATGGGTAATTGAATTAGCTTATTGGCTGGAT  948

seq1  ACAGATATATTTTTAAATCCCCGGTGGCCATCTAATACTTATTAAAGTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATATTTTTAAATCCCCGGTGGCCATCTAATACTTATTAAAGTAA  998

seq1  TACTTAACACATTTTCGAGCCCTTGGCTATCACACAAGTCACTCCCAGGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACACATTTTCGAGCCCTTGGCTATCACACAAGTCACTCCCAGGA  1048

seq1  AATGAATTC  1054
      |||||||||
seq2  AATGAATTC  1057