BAC Information

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BAC

Clone NameB6Ng01-014I22
Chromosome17 (Build37)
Map Location 17,038,353 - 17,039,503
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085
Downstream geneBC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014I22.bB6Ng01-014I22.g
ACCDH849066DH849067
length1,1311,164
definitionDH849066|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I22, 5' end.DH849067|Mus musculus domesticus DNA, BAC clone: B6Ng01-014I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttgcggggaagtctagtctccctcagtaatctgggtcacttg
cccaagccaacatcctaacttccttgatggccataagggaaggaattcag
attggctgagttatagataactttcagaagcaggaaatattgaagcaaag
aataaactgtctagcccttctcttgattttgccattttaataatcctggt
taaatacatgagccattgaaggtggcagaaactataaatgttttagaaca
aacacgtttttttctctcatacaaatacatcattaatttggagaaagtat
tgcactgtgaagcaaattaggttttataacaattaaattttattaaagaa
actaatgaaaaattttattcagaatcaaaggatagatctggctattgtgt
aaacataaaacaatgagttattggcaattcaaaggaatactttataaact
gacaagattatttcattcttccagtactgatcagaactccacttttcaaa
acaaaataagttagagcacgtctggaaacaaggcacagcctctgcctctt
ctttctatcaccttccagtctgtgtcttttattctgtgtgtatctaatct
cctcctgcccctctcctgtagagacttttttggttacgtgtaaacccatc
tgggataacttcaccatctcaggggctttagtcacatctgcaaagactat
cttcataaagtaacatttacaaggtctagaaattaggacttgctatcact
tgtgagacattattcaatccaccacggttgtttattactatgaggactaa
taaattagtctacgtgaaattcttagaaacactattagacattggatatt
gttgttggttgtgtgactattcttttggccatggggatctacttcttgag
gtaaacaggactttctcccttgaagaacaggattctaaagaggccatctg
ggatggatatagtcatcacgtcattttgtgtgctataccatgtttaatgc
tctgcaaggcagcacagatattctctttaatgtgattaatttcagtgata
tagaattgtggaccttgggcttattggttattaatattataatatgaaaa
tggaagtattaggataggattggactacctg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttattcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcatagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgttaagaaggacacatgctccactag
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgataaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaaggagttacagagacaaagtttggagctgagatg
aaaagatggaccatgtagagactgccatatccagggatccacccccataa
tcagcatccaaacgctgacaccattgcataccctagcaagatttatagaa
aggacccacatgtagctatctcttgtgagactatgccggggcctagcaac
acagaagtggatgctcacagtcagctaatgatggatcacaggcctcccat
tgagagctaagaaagaccaggagctaaaggatctgcaccctataggtgga
acaacatattgactaacagtaccccgagctctctgactctagctcaagta
tcaaaagaatgctattgggccatcacttgaagagagtggcctatggaacc
accacttgaatgccagtcacaggtgacgccttggcataagcggaagtgtt
gctgctgagagacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_17038353_17039503
seq2: B6Ng01-014I22.b_44_1174 (reverse)

seq1  CAGGTAAATGTCCAATCCTTAATCCTATAATAACTTCCAATATTCATAAT  50
      ||||||   ||||||||||  ||||  |||| |||||| || ||||    
seq2  CAGGTA---GTCCAATCCT--ATCC--TAAT-ACTTCC-ATTTTCA----  37

seq1  TATTACATTATTTAAAATAAACAATAAAGCACAAGGTCACAAATTCTATA  100
      ||||| | ||||   ||||| |||| |||| |||||||   |||||||| 
seq2  TATTATAATATT---AATAACCAAT-AAGCCCAAGGTCCACAATTCTAT-  82

seq1  ATCACTGAAATAATCCACATTAAAGAGAATATCTGTGCTGCCTTTGCAGA  150
      ||||||||||| |  ||||||||||||||||||||||||||| |||||||
seq2  ATCACTGAAATTAATCACATTAAAGAGAATATCTGTGCTGCC-TTGCAGA  131

seq1  GCATTAAACATGGTAATAGCACACAAAATGACGTGATGACTATATCCAT-  199
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  GCATTAAACATGGT-ATAGCACACAAAATGACGTGATGACTATATCCATC  180

seq1  CCAGATGGGCCTCTTTAGAATCCTGTTCTTCAAGGGAGAAAGTCCTGTTT  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAT-GGCCTCTTTAGAATCCTGTTCTTCAAGGGAGAAAGTCCTGTTT  229

seq1  ACCTCAAGAAGTAGATCCCCATGGCCAAAAGAATAGTCACACAACCAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAGAAGTAGATCCCCATGGCCAAAAGAATAGTCACACAACCAACA  279

seq1  ACAATATCCAATGTCTAATAGTGTTTCTAAGAATTTCACGTAGACTAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCCAATGTCTAATAGTGTTTCTAAGAATTTCACGTAGACTAATT  329

seq1  TATTAGTCCTCATAGTAATAAACAACCGTGGTGGATTGAATAATGTCTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTCCTCATAGTAATAAACAACCGTGGTGGATTGAATAATGTCTCA  379

seq1  CAAGTGATAGCAAGTCCTAATTTCTAGACCTTGTAAATGTTACTTTATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATAGCAAGTCCTAATTTCTAGACCTTGTAAATGTTACTTTATGA  429

seq1  AGATAGTCTTTGCAGATGTGACTAAAGCCCCTGAGATGGTGAAGTTATCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTCTTTGCAGATGTGACTAAAGCCCCTGAGATGGTGAAGTTATCC  479

seq1  CAGATGGGTTTACACGTAACCAAAAAAGTCTCTACAGGAGAGGGGCAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGGTTTACACGTAACCAAAAAAGTCTCTACAGGAGAGGGGCAGGA  529

seq1  GGAGATTAGATACACACAGAATAAAAGACACAGACTGGAAGGTGATAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTAGATACACACAGAATAAAAGACACAGACTGGAAGGTGATAGAA  579

seq1  AGAAGAGGCAGAGGCTGTGCCTTGTTTCCAGACGTGCTCTAACTTATTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCAGAGGCTGTGCCTTGTTTCCAGACGTGCTCTAACTTATTTT  629

seq1  GTTTTGAAAAGTGGAGTTCTGATCAGTACTGGAAGAATGAAATAATCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAAAGTGGAGTTCTGATCAGTACTGGAAGAATGAAATAATCTTG  679

seq1  TCAGTTTATAAAGTATTCCTTTGAATTGCCAATAACTCATTGTTTTATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTATAAAGTATTCCTTTGAATTGCCAATAACTCATTGTTTTATGT  729

seq1  TTACACAATAGCCAGATCTATCCTTTGATTCTGAATAAAATTTTTCATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAATAGCCAGATCTATCCTTTGATTCTGAATAAAATTTTTCATTA  779

seq1  GTTTCTTTAATAAAATTTAATTGTTATAAAACCTAATTTGCTTCACAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTAATAAAATTTAATTGTTATAAAACCTAATTTGCTTCACAGTG  829

seq1  CAATACTTTCTCCAAATTAATGATGTATTTGTATGAGAGAAAAAAACGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTTTCTCCAAATTAATGATGTATTTGTATGAGAGAAAAAAACGTG  879

seq1  TTTGTTCTAAAACATTTATAGTTTCTGCCACCTTCAATGGCTCATGTATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTAAAACATTTATAGTTTCTGCCACCTTCAATGGCTCATGTATT  929

seq1  TAACCAGGATTATTAAAATGGCAAAATCAAGAGAAGGGCTAGACAGTTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGGATTATTAAAATGGCAAAATCAAGAGAAGGGCTAGACAGTTTA  979

seq1  TTCTTTGCTTCAATATTTCCTGCTTCTGAAAGTTATCTATAACTCAGCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCTTCAATATTTCCTGCTTCTGAAAGTTATCTATAACTCAGCCA  1029

seq1  ATCTGAATTCCTTCCCTTATGGCCATCAAGGAAGTTAGGATGTTGGCTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAATTCCTTCCCTTATGGCCATCAAGGAAGTTAGGATGTTGGCTTG  1079

seq1  GGCAAGTGACCCAGATTACTGAGGGAGACTAGACTTCCCCGCAACTGAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTGACCCAGATTACTGAGGGAGACTAGACTTCCCCGCAACTGAAT  1129

seq1  TC  1151
      ||
seq2  TC  1131