BAC Information

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BAC

Clone NameB6Ng01-016B14
Chromosome17 (Build37)
Map Location 92,386,930 - 92,388,036
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016B14.b
ACCDH850174
length1,098
definitionDH850174|Mus musculus domesticus DNA, BAC clone: B6Ng01-016B14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgttgaccatatggtattgatatagtgttgacttctcttaaa
gctcaaggctaagaaaaatctaatgagacaaatatgttaggcaagagaaa
acatgtggatagatatttcacctttatttgtatttttcagaatttggaaa
ccatgttctaagctgctaattacaccaagtaccattttttttaacagttg
gaagcaacacattaattctttgttggctttcttacttttaactttcattc
tctcgaatcttccatttctgagctattgggatgtttttccaaaaggactt
ttgcagtggaaatctttcccaggttagttcatagatgctgttccagaaac
acttaataaaattctagtaaacagaaacaatgttttgaattctggtaaaa
atgtaaacaagtaaatgaggagtacatatataaaacattgaatagtaaat
ataatcctatataagacagggtgcatcttcatgcaatgaatctttgaaaa
gaaaatagctataaaatgaaatttacatgcagtgagatttacctatataa
aatgagagattccatgtttatactttacactattgtgcaacagatacaat
aacctaaaagcatgattccctaacactattactgatgccctgttattcta
atagagaggagtcaaacaagactgtgctttgagagactccacccagcagc
tgaatcaagcaacttaagtcacccacagacaaactgtgaatggagcctat
ggattcttacagaaaaataagagaaatgataacagcctgaatgtgataag
aactccacaggcagaccaacagaatcaactaatctggacccttgtggata
tgagagacttgaatcaccaacaaaagagcatacacaggaaggaactaggc
ctcctcttggtcttcaggcggattctgaacatctagagtagggactaacc
caaaagctttatttgagatatgttcttctatctgggttgccttgtctggc
ctcagtgggagagatgcaactaccctagcagaagttcttgatctgcagat
gagatatccaggcatacctcacaacccaaggagaaagagactatggaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92386930_92388036
seq2: B6Ng01-016B14.b_48_1145

seq1  GAATTCATTGTTGACCATATGGTATTGATATAGTGTTGACTTCTCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTGACCATATGGTATTGATATAGTGTTGACTTCTCTTAAA  50

seq1  GCTCAAGGCTAAGAAAAATCTAATGAGACAAATATGTTAGGCAAGAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGGCTAAGAAAAATCTAATGAGACAAATATGTTAGGCAAGAGAAA  100

seq1  ACATGTGGATAGATATTTCACCTTTATTTGTATTTTTCAGAATTTGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGATAGATATTTCACCTTTATTTGTATTTTTCAGAATTTGGAAA  150

seq1  CCATGTTCTAAGCTGCTAATTACACCAAGTACCATTTTTTTTAACAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCTAAGCTGCTAATTACACCAAGTACCATTTTTTTTAACAGTTG  200

seq1  GAAGCAACACATTAATTCTTTGTTGGCTTTCTTACTTTTAACTTTCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACACATTAATTCTTTGTTGGCTTTCTTACTTTTAACTTTCATTC  250

seq1  TCTCGAATCTTCCATTTCTGAGCTATTGGGATGTTTTTCCAAAAGGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAATCTTCCATTTCTGAGCTATTGGGATGTTTTTCCAAAAGGACTT  300

seq1  TTGCAGTGGAAATCTTTCCCAGGTTAGTTCATAGATGCTGTTCCAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTGGAAATCTTTCCCAGGTTAGTTCATAGATGCTGTTCCAGAAAC  350

seq1  ACTTAATAAAATTCTAGTAAACAGAAACAATGTTTTGAATTCTGGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATAAAATTCTAGTAAACAGAAACAATGTTTTGAATTCTGGTAAAA  400

seq1  ATGTAAACAAGTAAATGAGGAGTACATATATAAAACATTGAATAGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAACAAGTAAATGAGGAGTACATATATAAAACATTGAATAGTAAAT  450

seq1  ATAATCCTATATAAGACAGGGTGCATCTTCATGCAATGAATCTTTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTATATAAGACAGGGTGCATCTTCATGCAATGAATCTTTGAAAA  500

seq1  GAAAATAGCTATAAAATGAAATTTACATGCAGTGAGATTTACCTATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGCTATAAAATGAAATTTACATGCAGTGAGATTTACCTATATAA  550

seq1  AATGAGAGATTCCATGTTTATACTTTACACTATTGTGCAACAGATACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGATTCCATGTTTATACTTTACACTATTGTGCAACAGATACAAT  600

seq1  AACCTAAAAGCATGATTCCCTAACACTATTACTGATGCCCTGTTATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAAAGCATGATTCCCTAACACTATTACTGATGCCCTGTTATTCTA  650

seq1  ATAGAGAGGAGTCAAACAAGACTGTGCTTTGAGAGACTCCACCCAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGGAGTCAAACAAGACTGTGCTTTGAGAGACTCCACCCAGCAGC  700

seq1  TGAATCAAGCAACTTAAGTCACCCACAGACAAACTGTGAATGGAGCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAAGCAACTTAAGTCACCCACAGACAAACTGTGAATGGAGCCTAT  750

seq1  GGATTCTTACAGAAAAATAAGAGAAATGATAACAGCCTGAATGTGATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTTACAGAAAAATAAGAGAAATGATAACAGCCTGAATGTGATAAG  800

seq1  AACTCCACAGGCAGACCAACAGAATCAACTAATCTGGACCCTTGTGGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCACAGGCAGACCAACAGAATCAACTAATCTGGACCCTTGTGGATA  850

seq1  TGAGAGACTTGAATCACCAACAAAAGAGCATACACAGGAAGGAACTAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGACTTGAATCACCAACAAAAGAGCATACACAGGAAGGAACTAGGC  900

seq1  CTCCTCTTGGTCTTCAGGCGGATTCTGAACATCTAGAGTAGGGACTAACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTGGTCTTCAGGCGGATTCTGAACATCTAGAGTAGGGACTAACC  950

seq1  CAAAAGCTTTATTTGAGATATGTTCTTCTATCTGGGTTGCCTTGTCTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTTTATTTGAGATATGTTCTTCTATCTGGGTTGCCTTGTCTGGC  1000

seq1  CTCAGTGGGAGAGGATGCAACTACCCTAGCAGA--GTCTTGATCTGGCAA  1048
      |||||||||||| ||||||||||||||||||||   ||||||||||   |
seq2  CTCAGTGGGAGA-GATGCAACTACCCTAGCAGAAGTTCTTGATCTG--CA  1047

seq1  GATGAAGGATATCCAGGCATACCTCACCAACCCAAAGGAGAAAAGGAAGG  1098
      |||||  ||||||||||||||||||| |||||| |||||||||  ||  |
seq2  GATGA--GATATCCAGGCATACCTCA-CAACCC-AAGGAGAAA--GA--G  1089

seq1  ACTATGGGA  1107
      ||||||| |
seq2  ACTATGGAA  1098