BAC Information

Click to search

BAC

Clone NameB6Ng01-016J14
Chromosome17 (Build37)
Map Location 18,246,591 - 18,247,112
singlet/doubletsinglet
Overlap geneEG665210
Upstream geneZfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021
Downstream geneVmn2r92, EG665227, EG627132, LOC100041612, Vmn2r95, Vmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016J14.bB6Ng01-016J14.g
ACCDH850520DH850521
length1,154936
definitionDH850520|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J14, 5' end.DH850521|Mus musculus domesticus DNA, BAC clone: B6Ng01-016J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcaccaaaattatctggccctgggcttttcctttggttgggag
acttttaatgactgcttctaattccttaaaagatactaatatgtttagat
gatttgtctgatcctgacttaactttggtaccttgtatctgtctagaaaa
tcatccatttcatgtagattttctgattttgtagaatataggattttgta
gtaggatctgatgattttttgaattcactcacattctgttgttatgtctt
ttcatttctgattttgttaatttgggtactgtctaagtgccatctagtta
gtttgctaatagtttatctatcttgttgacttttttagagaaccagctct
tagttttgatcctttgtatagttctctttgtttctatttcattgatttca
gctctgagtttgattatttcgtgttgtctattccccttggatttatttgc
tttcttttgttctagagatttcataagttctggtaagctgctagtgtagg
atctcaccaatttatttatttattttaaaagattttatttattttatgta
tatgagtacactatagctgtcttcagacacaccagaatagggcattgaat
accattacagatggttgtgagccaccatgtggttgctgggatttgagctc
aggacctctggcagagcagtcaatgctcttaatcactgagccttctcttc
agcccctcaccaatttctttatgaagacactcagagatatgtgttttcct
cttgcactgctttcattgtgttccataagttttggtatgctatgccttca
ttttcattaaattctaaaaagtctttaatttctttctttaattcttctct
gactaaattatcattgagtcaagagctgttgaccatccacaagtatgtgg
ggttttctgctattttattgttattcaagaccaggcttagtcatggtggt
ctgataagagtacatggaattagttcaatcttcttgtgtctgtgaagctt
gtttgtggctgattacgtggtcaattccgataagattcaatggaggtgct
tgaagaaggagtataattctttggtttaatgggtgaatgtcctgagaaaa
tgttaatccattggttcataatctcgtagttacattagggtcttcggtta
cgat
gaattcagtggagaaataggaagaattccataaaattacatttacctgtc
tcattagaaatctcattgtctgcacaaggagtgcacttgtagcagcagat
ggccttgccctccatggttactttcctgaatccaggcccacaactctcag
tgcagaaagaccgagggacctgtgaagaatgaaaagaatgttatctaatg
cttagagttttatggaaaaaattatataaacagagtttttgaagatcata
cactgaaaagcaaagtactgttgttaacacctagacttatgtaaagatta
gttgtagtaataaaggatgggaaactagggttagccaccataaagttcca
ggtgccacgaaagctagaaactcccagattccatctaggatgactttagc
tgatataccccacaaatgtgagagaaaacctgttgagaccatatttatag
gttagacaaggcccctggctgagagatgggggcaccaacccatatcaaaa
atactaacccagaattgctcttatctaaaggaagtatagggacaaaaagg
ggagcagagactgaaggaaaggtcatccagagactgccctacctggacat
ctatcctatatatggtcaccaaacacaaacacggctgcttatgccaagaa
gtgcttgctgacaggagcgagatatagctgtctcatgagaacttctgcca
gtgccttaacaatacagatgaggatgctgacagccaaccatctgactgag
tacagggaccccagtggaggagttaatgactaaaggagctgacgggtttg
caaccccataagaagaacaacaatttcaatgaactagaatgtccagagct
cacggggactaaatcaccaaccaaagaatacatatggtaggatccatggc
tccagcagcatatgttacagaggaggcccatatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_18246591_18247112
seq2: B6Ng01-016J14.g_65_586 (reverse)

seq1  AAGAGCAATTCTGGGTTAGTATTTTTGATATGGGTTGGTGCCCCCATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAATTCTGGGTTAGTATTTTTGATATGGGTTGGTGCCCCCATCTC  50

seq1  TCAGCCAGGGGCCTTGTCTAACCTATAAATATGGTCTCAACAGGTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCAGGGGCCTTGTCTAACCTATAAATATGGTCTCAACAGGTTTTCT  100

seq1  CTCACATTTGTGGGGTATATCAGCTAAAGTCATCCTAGATGGAATCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATTTGTGGGGTATATCAGCTAAAGTCATCCTAGATGGAATCTGGG  150

seq1  AGTTTCTAGCTTTCGTGGCACCTGGAACTTTATGGTGGCTAACCCTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTAGCTTTCGTGGCACCTGGAACTTTATGGTGGCTAACCCTAGTT  200

seq1  TCCCATCCTTTATTACTACAACTAATCTTTACATAAGTCTAGGTGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCTTTATTACTACAACTAATCTTTACATAAGTCTAGGTGTTAAC  250

seq1  AACAGTACTTTGCTTTTCAGTGTATGATCTTCAAAAACTCTGTTTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTACTTTGCTTTTCAGTGTATGATCTTCAAAAACTCTGTTTATATA  300

seq1  ATTTTTTCCATAAAACTCTAAGCATTAGATAACATTCTTTTCATTCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCATAAAACTCTAAGCATTAGATAACATTCTTTTCATTCTTCA  350

seq1  CAGGTCCCTCGGTCTTTCTGCACTGAGAGTTGTGGGCCTGGATTCAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCCTCGGTCTTTCTGCACTGAGAGTTGTGGGCCTGGATTCAGGAA  400

seq1  AGTAACCATGGAGGGCAAGGCCATCTGCTGCTACAAGTGCACTCCTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCATGGAGGGCAAGGCCATCTGCTGCTACAAGTGCACTCCTTGTG  450

seq1  CAGACAATGAGATTTCTAATGAGACAGGTAAATGTAATTTTATGGAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGAGATTTCTAATGAGACAGGTAAATGTAATTTTATGGAATTC  500

seq1  TTCCTATTTCTCCACTGAATTC  522
      ||||||||||||||||||||||
seq2  TTCCTATTTCTCCACTGAATTC  522