BAC Information

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BAC

Clone NameB6Ng01-019C21
Chromosome17 (Build37)
Map Location 77,555,645 - 77,556,706
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019C21.bB6Ng01-019C21.g
ACCDH852349DH852350
length1,064949
definitionDH852349|Mus musculus domesticus DNA, BAC clone: B6Ng01-019C21, 5' end.DH852350|Mus musculus domesticus DNA, BAC clone: B6Ng01-019C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaaacatatagcttggccattcacgcagaggaactttaacaa
aaccaccaaactcataaccacactcattttggtaatcaaaacaattcaaa
gcaattaaagcaatctaaactaataatatctgttgattcaatattaccct
gtcttctggcccaacctacatgagaccaaagcctaaattatttatatatc
tgtgtaaacttgaatcttccctactctggagattaacatctctgtgtaca
tattgtagtgtgtccctgtctctatatataattatcaaggtctaagtttc
tactgtctgagataggctaggctccctacctcctacttgcaacctatttt
attttaagattgaaagcctcaatatttatctctgtatttaatgataacca
aattcccttctacttactgtataagcctattcataggctcaaatttttat
taccctatgctgacaatcccagaaatgatgtgtcaaccacattcaaagat
tttgagaaaattttctggcaagacttttatacatctttaaaacatttgtt
cattcattctccctgatgtctctcttctgtggagctaatatttgctacat
ctaccatttggctctctacctctcatctcatgcattttgtatcagttttg
aaccatgggaaaaatcttcatgtggttcaggtaaaatctctatattccct
tatacccttaaaagcaattaaatccgatttataaatctctatcctttatt
tatctggtggctggagacaggcagctttattgtttgcttctcattgtctc
tagcatgctgcacagggtaaatccctcctggcagccatgtaccttttctc
tagtttcactctctggaccacatgacttagttctgctcactaaagaaaac
agttctccccatttctagacttatcattggttgtgtattccaccacagac
actctaaattatttaatagtgagttcttgccaccacagtaaatgccatct
actgcagtgaatttttttctgtactggctttgaagctcctggaaagaagc
aggcacatatccac
gaattccttggtactctccaaatttctattgttctattgtgtacgtgggt
gggtgggcatgcatgcatatattcatgtgtgcttatgtgtgtaggtatgc
atgtgcatgtgtgtgtaaacatgcatgtgagcacatgcacatagaaggta
gaggacaaattttggtctcattcctgtggggaggcgaaacacagggggtt
tgtctgtgcttatcccacatcagtactgggtttcagggacactctgagac
actgctccaggggtgggaaatgcactctgagatgaggaaaagccagagct
gggtccttaggcctgcaatgaggctgaggcccaagatgtctctgactctt
ggacatccaggcagtactgggaatcacagaagagctgagaaagaagtcag
ggcccgaggctggcctaatcactagcccaggagctacagcttagttcaac
ggtgattgtctttaacttgtcatcagttgtctgagagtgcagagaggcct
tctatgagagatttatctgtggttctgtaggcaaaggccttttccatgtt
tccctgtggcagtgataaatgaaagagatagtcatggtcctagagtgttt
attgactgtttatggagtaaaatggatgtgtacctcacctctcagagtgg
aactgagattacataccgtgtacaggaaagaatgtcttgggaaagggaag
cttgttggctaagccctccagggcgtctccttacctcatagcatgtatag
gtgagttcagggcctaagtgagcacagtttactaggttccttatgtgggg
aatgtggcatgtgctcccagccaggattctggcagagagcagggagactt
ctaagtcttaggtttgtgcccactgaatctcttgtctcacgtgctgtacc
catcaagattctgggattttttttttttttagggtattttccctcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77555645_77556706
seq2: B6Ng01-019C21.b_45_1108

seq1  GAATTCATTAAACATATAGCTTGGCCATTCACGCAGAGGAACTTTAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAACATATAGCTTGGCCATTCACGCAGAGGAACTTTAACAA  50

seq1  AACCACCAAACTCATAACCACACTCATTTTGGTAATCAAAACAATTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAAACTCATAACCACACTCATTTTGGTAATCAAAACAATTCAAA  100

seq1  GCAATTAAAGCAATCTAAACTAATAATATCTGTTGATTCAATATTACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTAAAGCAATCTAAACTAATAATATCTGTTGATTCAATATTACCCT  150

seq1  GTCTTCTGGCCCAACCTACATGAGACCAAAGCCTAAATTATTTATATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGGCCCAACCTACATGAGACCAAAGCCTAAATTATTTATATATC  200

seq1  TGTGTAAACTTGAATCTTCCCTACTCTGGAGATTAACATCTCTGTGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAACTTGAATCTTCCCTACTCTGGAGATTAACATCTCTGTGTACA  250

seq1  TATTGTAGTGTGTCCCTGTCTCTATATATAATTATCAAGGTCTAAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTAGTGTGTCCCTGTCTCTATATATAATTATCAAGGTCTAAGTTTC  300

seq1  TACTGTCTGAGATAGGCTAGGCTCCCTACCTCCTACTTGCAACCTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTGAGATAGGCTAGGCTCCCTACCTCCTACTTGCAACCTATTTT  350

seq1  ATTTTAAGATTGAAAGCCTCAATATTTATCTCTGTATTTAATGATAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGATTGAAAGCCTCAATATTTATCTCTGTATTTAATGATAACCA  400

seq1  AATTCCCTTCTACTTACTGTATAAGCCTATTCATAGGCTCAAATTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTTCTACTTACTGTATAAGCCTATTCATAGGCTCAAATTTTTAT  450

seq1  TACCCTATGCTGACAATCCCAGAAATGATGTGTCAACCACATTCAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTATGCTGACAATCCCAGAAATGATGTGTCAACCACATTCAAAGAT  500

seq1  TTTGAGAAAATTTTCTGGCAAGACTTTTATACATCTTTAAAACATTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAAATTTTCTGGCAAGACTTTTATACATCTTTAAAACATTTGTT  550

seq1  CATTCATTCTCCCTGATGTCTCTCTTCTGTGGAGCTAATATTTGCTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCTCCCTGATGTCTCTCTTCTGTGGAGCTAATATTTGCTACAT  600

seq1  CTACCATTTGGCTCTCTACCTCTCATCTCATGCATTTTGTATCAGTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATTTGGCTCTCTACCTCTCATCTCATGCATTTTGTATCAGTTTTG  650

seq1  AACCATGGGAAAAATCTTCATGTGGTTCAGGTAAAATCTCTATATTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGGGAAAAATCTTCATGTGGTTCAGGTAAAATCTCTATATTCCCT  700

seq1  TATACCCTTAAAAGCAATTAAATCCGATTTATAAATCTCTATCCTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTTAAAAGCAATTAAATCCGATTTATAAATCTCTATCCTTTATT  750

seq1  TATCTGGTGGCTGGAGACAGGCAGCTTTATTGTTTGCTTCTCATTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTGGCTGGAGACAGGCAGCTTTATTGTTTGCTTCTCATTGTCTC  800

seq1  TAGCAGGCTGCACAGGGTAAATCCCTCCTGGCAGCCATGTACCTTTTCTC  850
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGCTGCACAGGGTAAATCCCTCCTGGCAGCCATGTACCTTTTCTC  850

seq1  TAGTTTCACTCTCTGGACCACATGACTTAGTTCTGCTCACT-AAGAAAAC  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGTTTCACTCTCTGGACCACATGACTTAGTTCTGCTCACTAAAGAAAAC  900

seq1  AGTTCTCCCCATTTCTAGACTTATCATTGGTTGTGTATTCCACCACAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCCCATTTCTAGACTTATCATTGGTTGTGTATTCCACCACAGAC  950

seq1  ACTCTAAATTATTTAATAGTGAGTTCTTGCCCACCACAGTAAATGCCATC  999
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTCTAAATTATTTAATAGTGAGTTCTTG-CCACCACAGTAAATGCCATC  999

seq1  TACTGCAGTGATTTTTTTCCTGTACT-GCTTTG-AGCTCCTGGAGAGTAG  1047
      ||||||||||| |||||| ||||||| |||||| |||||||||| || ||
seq2  TACTGCAGTGAATTTTTTTCTGTACTGGCTTTGAAGCTCCTGGAAAGAAG  1049

seq1  CAGGCACATACCCAC  1062
      |||||||||| ||||
seq2  CAGGCACATATCCAC  1064