BAC Information

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BAC

Clone NameB6Ng01-026A10
Chromosome17 (Build37)
Map Location 83,349,978 - 83,351,131
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
Downstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026A10.bB6Ng01-026A10.g
ACCDH857187DH857188
length2821,157
definitionDH857187|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A10, 5' end.DH857188|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagatgtacatgaaagggtcagacctataggtccaaaactacaagatccc
agtgacacaggacaacagcaggctattcaagaagagtcctagggaggttc
cagtattgatagagtaacagaagccagagcctcagaccagaccaatacat
tgaaatgaagatgtgcaagcaaagtgaggacaaagggtatactgtgggac
acactgcaccacgttacagcttccacagtgagatttgttttatgtgttgg
agatggggaggttacaatgtggagggtgggta

gaattcagctgagaaagaggctactgagtggcagcccccgtcctcagggt
gatcagctgatctgccgattctgggagcaggtgtcccctccatgcagagc
aagcgtccccaggtggggctgcagcttccttcctttctctccctgtgagc
ggctgaatgagtgacagcttagtttccccatgagtacaaatgccacttgt
gaccaattcggtcttccaggaagagacctcgagacctgcatggtaatcta
catcatgttcagctctttttgaaaaacatgagctgggcagtggtggccca
tgcctttaattccagcacttgggaggcagaggcaggtggatttctgagtt
cgaggccagcctggtctacagggtgagttccaggacagccagggctacac
agagaaaccctgtctcgaaaaccaaagcaaagcaaagcaaagcaaagcaa
agcaaagcaaagcaaagcaaaccaaaccaaaccaaaccaaaccaaaccaa
caaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggcagac
gtgggaactgtccctttatgtgattcttgtcttgctcaaatcaattctgg
ggagtttcacaggatcctgggactctctaagaaggtcacttgtggaaatc
cctggagtttgttcttgggaagcctggatggtatcttcagagacaagaag
ggtctatttgccatataggatgaagaaacagacctcgaagtagaatcctt
cagtgccccagtactatcagtgtgaaccagagttctctgaaaaaataaaa
agaacacacctatattaaagattagaattcctgcaactgccatgagttgg
gatgttgcagatctaggacctaattatcctgattatctctagcccttcga
caaccattcatgggcccttctgggtgtccgatctaatgtccttgtaagtt
atcagacgaagcaatttgaaatgtagtagattaggcgggactgctgatgt
tcaattaacccaaaggctaagaatgccttgtagcagaagagttcttctgc
tgtgatgcgtgtttcccaccagtgtgtctggaaaatgccttgagatacat
gcctttcttggctctgttacttaaaactgacaaactctaccagttttagg
tttggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83349978_83351131
seq2: B6Ng01-026A10.g_64_1220 (reverse)

seq1  TGCCAAACCTGAAACTGGTAAGAGTTTCGTCAAGTTTTTATAGTTACAGA  50
      |||||||||| |||||||| ||||||| ||| ||||||   ||| |||| 
seq2  TGCCAAACCTAAAACTGGT-AGAGTTT-GTC-AGTTTT--AAGTAACAG-  44

seq1  AGCCAAGAAAGGCATGAA--TCAAGGCATTTTCCAGACACATGGGTGGGA  98
      |||||||||||||||| |  |||||||||||||||||||||  |||||||
seq2  AGCCAAGAAAGGCATGTATCTCAAGGCATTTTCCAGACACACTGGTGGGA  94

seq1  AACACGCAGTCACAGCAG-AGAACTC-TCTGCTAC-AGGCATTCTTAGCC  145
      |||||||| ||||||||| ||||||| |||||||| ||||||||||||||
seq2  AACACGCA-TCACAGCAGAAGAACTCTTCTGCTACAAGGCATTCTTAGCC  143

seq1  TTTGGGTTAA-TGGACATCAGCAGTCC--GCTTATCTACTACATTTCAGA  192
      |||||||||| || |||||||||||||   || ||||||||||||||| |
seq2  TTTGGGTTAATTGAACATCAGCAGTCCCGCCTAATCTACTACATTTCAAA  193

seq1  TTGCTTCGTCTGAT-ACTTACAAGGACATTAGATCGGACACCCAGAAGGG  241
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGCTTCGTCTGATAACTTACAAGGACATTAGATCGGACACCCAGAAGGG  243

seq1  -CCATGAATGGTTGTCGAAGGGCTAGAGATAATCAGGATAATTAGGTCCT  290
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAATGGTTGTCGAAGGGCTAGAGATAATCAGGATAATTAGGTCCT  293

seq1  AGATCTGCAACATCCCAACTCATGGCAGTTGCAGGAATTCTAATCTTTAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGCAACATCCCAACTCATGGCAGTTGCAGGAATTCTAATCTTTAA  343

seq1  TATAGGTGTGTTCTTTTTATTTTTTCAGAGAACTCTGGTTCACACTGATA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGTGTTCTTTTTATTTTTTCAGAGAACTCTGGTTCACACTGATA  393

seq1  GTACTGGGGCACTGAAGGATTCTACTTCGAGGTCTGTTTCTTCATCCTAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGGCACTGAAGGATTCTACTTCGAGGTCTGTTTCTTCATCCTAT  443

seq1  ATGGCAAATAGACCCTTCTTGTCTCTGAAGATACCATCCAGGCTTCCCAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAATAGACCCTTCTTGTCTCTGAAGATACCATCCAGGCTTCCCAA  493

seq1  GAACAAACTCCAGGGATTTCCACAAGTGACCTTCTTAGAGAGTCCCAGGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAACTCCAGGGATTTCCACAAGTGACCTTCTTAGAGAGTCCCAGGA  543

seq1  TCCTGTGAAACTCCCCAGAATTGATTTGAGCAAGACAAGAATCACATAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGAAACTCCCCAGAATTGATTTGAGCAAGACAAGAATCACATAAA  593

seq1  GGGACAGTTCCCACGTCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGTTCCCACGTCTGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  643

seq1  TTCTTTCTTTTTTGTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTTTTGTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGCTT  693

seq1  TGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGGTTTTCGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGCTTTGGTTTTCGA  743

seq1  GACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACCCTGTAGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACCCTGTAGA  793

seq1  CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGC  843

seq1  TGGAATTAAAGGCATGGGCCACCACTGCCCAGCTCATGTTTTTCAAAAAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAAAGGCATGGGCCACCACTGCCCAGCTCATGTTTTTCAAAAAG  893

seq1  AGCTGAACATGATGTAGATTACCATGCAGGTCTCGAGGTCTCTTCCTGGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAACATGATGTAGATTACCATGCAGGTCTCGAGGTCTCTTCCTGGA  943

seq1  AGACCGAATTGGTCACAAGTGGCATTTGTACTCATGGGGAAACTAAGCTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGAATTGGTCACAAGTGGCATTTGTACTCATGGGGAAACTAAGCTG  993

seq1  TCACTCATTCAGCCGCTCACAGGGAGAGAAAGGAAGGAAGCTGCAGCCCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATTCAGCCGCTCACAGGGAGAGAAAGGAAGGAAGCTGCAGCCCC  1043

seq1  ACCTGGGGACGCTTGCTCTGCATGGAGGGGACACCTGCTCCCAGAATCGG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGGACGCTTGCTCTGCATGGAGGGGACACCTGCTCCCAGAATCGG  1093

seq1  CAGATCAGCTGATCACCCTGAGGACGGGGGCTGCCACTCAGTAGCCTCTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAGCTGATCACCCTGAGGACGGGGGCTGCCACTCAGTAGCCTCTT  1143

seq1  TCTCAGCTGAATTC  1154
      ||||||||||||||
seq2  TCTCAGCTGAATTC  1157


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