BAC Information

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BAC

Clone NameB6Ng01-027O22
Chromosome17 (Build37)
Map Location 58,703,478 - 58,704,399
singlet/doubletsinglet
Overlap genenone
Upstream geneCntnap5c, LOC674419
Downstream geneLOC620408, EG545216, LOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027O22.bB6Ng01-027O22.g
ACCDH858544DH858545
length9251,065
definitionDH858544|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O22, 5' end.DH858545|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcattttaatggagaatgctgcagtttatctggacatggaaag
aaaaatggtggaaccaacaaaaaaaaaatccatgagaaggactgggtgtg
ggtcataaagggcagtaggagaacaggggccaagacagcagagatccaaa
aagaagaaagacagggtaacactttcttatgtactaaaaattagatttga
aatcacgaatgaggacttgacatggctcagtggttaagagtgattgatgt
tctttaagaagaccaaagttgagaacccaacacccacataagacttgcaa
ctgcttgtaactttagcattaggcacccagtgctcagtttgggcttctag
gtatctgcatgtaaacacacacacacacacacacacacacacacacacac
acacacacacacacacatcttgacatcttcttagtgtctaatatttcagt
gactgagcagagtaacatgtacaagcctattatcttttagacttttacac
tgttgactgacaaaatgttgaccatactttttttataattgactaaaatt
ctttcaggatttttggaaacaagaccacagtagtgaagaaccaggtttca
ggaatcataccaaaggcacatccacatactggcatggtgatatcacattt
gatttcactttgataatatgacaataaaatctgtttactatgttttatcc
agcatatgtttactcccactcaagagttatgaggacctgagtaccttgtc
acttctccaggaaagggttattctgctattaattccatgcttgtagtcat
taatatatatttttatcattattgtttgttttttgtatgcatgcaaaagg
gttgtcatggttatgaaagtgcctatgcaggtcaaaagaaaaacttagac
cttgtggaactgaatttatagtggt
gaattccagttttatgttcaataccaaattctttacaaaatgatgtaaag
ttgtttccagtataagctggcccattatctgtcttgatgactttataaaa
tcccatagcattgaaggcttgtaagcaatgatcaattacatttctagggg
gttctcccaaatgtagaaaagcaaaagggtgccctgaacaactgtcaaaa
cagatacatatatattctaattttccataatctgcataatgagttacatc
catttgccaaatatgattgggcataaggcctcatggattaaccactaaat
gaggaactagagataatgtaatgtagttagggcattgttttacaatcatc
ccagcctgctctttagtgatcttacgtcagagccttaaggtgtgactaga
aagataaaatttattatgatcacagctagccaatgcaataggatctgaaa
ctaaggattctcccattaaagctctgtcaatgtgatgattgcctgcagtt
aaaggtccaggctgtccataatgagctcatatataaccaatataaaaggg
attttgggggttaggaatgatggtttgtagctgtgaatacagagatccag
ctggcgtattgaaatgaagtgtaccacaagttttccaacagaggaacaga
ctgatccacatatagagtataagtaaagaggttaaaagtatcacttacgg
actaaaaatcattcagtactgctgtcagttctcatagctgagctgagagc
ccaggagtctctatgactactttgttgattgtttaggagatatccagttt
gtccctttagagaaactgtcataaaatcaaaagaacattttgcagaggct
gtatgtaaagatgtcatattaggaaacatgacctatatatatttaaattt
tttttatcaacctatcttgagggtaatgttagctttattgcctttaaatc
tttttgagtcagcaacctatctatactaggcgttttgccagaatttgatc
tacattaaagggttgaaaaagaggctgatccttttgaaataacaagggct
gctactttctccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_58703478_58704399
seq2: B6Ng01-027O22.b_44_967

seq1  GAATTCAGCATTTTAATGGAGAATGCTGCAGTTTATCTGGACATGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTTAATGGAGAATGCTGCAGTTTATCTGGACATGGAAAG  50

seq1  AAAAATGGTGGAACCAACAAAAAAAAAATCCATGAGAAGGACTGGGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGTGGAACCAACAAAAAAAAAATCCATGAGAAGGACTGGGTGTG  100

seq1  GGTCATAAAGGGCAGTAGGAGAACAGGGGCCAAGACAGCAGAGATCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATAAAGGGCAGTAGGAGAACAGGGGCCAAGACAGCAGAGATCCAAA  150

seq1  AAGAAGAAAGACAGGGTAACACTTTCTTATGTACTAAAAATTAGATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAGACAGGGTAACACTTTCTTATGTACTAAAAATTAGATTTGA  200

seq1  AATCACGAATGAGGACTTGACATGGCTCAGTGGTTAAGAGTGATTGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACGAATGAGGACTTGACATGGCTCAGTGGTTAAGAGTGATTGATGT  250

seq1  TCTTTAAGAAGACCAAAGTTGAGAACCCAACACCCACATAAGACTTGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGAAGACCAAAGTTGAGAACCCAACACCCACATAAGACTTGCAA  300

seq1  CTGCTTGTAACTTTAGCATTAGGCACCCAGTGCTCAGTTTGGGCTTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTAACTTTAGCATTAGGCACCCAGTGCTCAGTTTGGGCTTCTAG  350

seq1  GTATCTGCATGTAAACACACACACACACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGCATGTAAACACACACACACACACACACACACACACACACACAC  400

seq1  ACACACACACACACACATCTTGACATCTTCTTAGTGTCTAATATTTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACATCTTGACATCTTCTTAGTGTCTAATATTTCAGT  450

seq1  GACTGAGCAGAGTAACATGTACAAGCCTATTATCTTTTAGACTTTTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGCAGAGTAACATGTACAAGCCTATTATCTTTTAGACTTTTACAC  500

seq1  TGTTGACTGACAAAATGTTGACCATACTTTTTTTATAATTGACTAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTGACAAAATGTTGACCATACTTTTTTTATAATTGACTAAAATT  550

seq1  CTTTCAGGATTTTTGGAAACAAGACCACAGTAGTGAAGAACCAGG-TTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTTTCAGGATTTTTGGAAACAAGACCACAGTAGTGAAGAACCAGGTTTCA  600

seq1  GGAATCATACCAAAGGCACATCCACATACTGGCATGGTGATATCACATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATACCAAAGGCACATCCACATACTGGCATGGTGATATCACATTT  650

seq1  GATTTCACTTTGATAATATGACAATAAAATCTGTTTACTATG-TTTATCC  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATTTCACTTTGATAATATGACAATAAAATCTGTTTACTATGTTTTATCC  700

seq1  AGCATATG-TTACTCCCACTCAAGAGTTATGAGGACCTGAGTACCTTGTC  747
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGTTTACTCCCACTCAAGAGTTATGAGGACCTGAGTACCTTGTC  750

seq1  AC-TCTCCAGGAAAGGGTTATTCTGCTATTAATTCCATGCTTGTAGTTCA  796
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTTCTCCAGGAAAGGGTTATTCTGCTATTAATTCCATGCTTGTAG-TCA  799

seq1  TTAATATATATTTTTATCATTATTGTTTGTTTTTTGTATGCATGCATAAA  846
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTAATATATATTTTTATCATTATTGTTTGTTTTTTGTATGCATGCA-AAA  848

seq1  GGTATGTCATGGATATGAAAGTGCCTATGCAGGTCAGAAGAAGAACTTAG  896
      ||  |||||||| ||||||||||||||||||||||| ||||| |||||||
seq2  GGGTTGTCATGGTTATGAAAGTGCCTATGCAGGTCAAAAGAAAAACTTAG  898

seq1  ACCTTGTGGAACTGGAGTTATAGTGG  922
      |||||||||||||| | |||||||||
seq2  ACCTTGTGGAACTGAATTTATAGTGG  924