BAC Information

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BAC

Clone NameB6Ng01-029O03
Chromosome17 (Build37)
Map Location 37,676,906 - 37,677,868
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111
Downstream geneOlfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029O03.bB6Ng01-029O03.g
ACCDH859951DH859952
length9441,234
definitionDH859951|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O03, 5' end.DH859952|Mus musculus domesticus DNA, BAC clone: B6Ng01-029O03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcagaaaaactgtcaccagttgactaggagaaagtagtcag
tccctcaaaaagccaaacccagctgatcattattaattcattaggacaaa
agacttgtgggaaatataaattgtagggctttccttaagagggtaatttc
acttataatctcagtaattcataatttgtatctcactaaagaatacctga
aatttttgataaagattgagaaacttggacagaataagattaaaaattca
actccaaactatagtcaaataaatgaattacaagaaccatatgaatttct
tttcttgtcaaatgtaaaaatcctaaacacagtgcagttgcaaccatatc
aacacaaaattgttatatgatatgcaaatcatagaaaaatgtaactatcc
agaatagaactaattcattcagctagtacttctaatctgtcaaactcatt
ttacaaactgaggtaagaaaaacaatgaacattaaaataggtaatcttgt
gttgagggaaatattaaaaaatgaacctgccaactatctgcatggctgga
ccatgttcccatgctttgctgctgccaacaactctctccagctagcccct
gcagcatctggctttcttgtccccgaggagccactagttccctctctgct
ataatcccctgtaacccttggtcccacactccagtagcatagcgcccccc
cccccacccgctgtgcttattgctgtgttcccagctctctttcactcctc
cctggcacactagttcttcctcagccataaacccatgtagtcggcaatcc
cacattccagtaactaaatggaaccaccaacttctgattgcatatcacat
acccagaacccagtaaatcagactcttttttttaatttttttatacgtat
ttctcatacatttcatgctatcccaaagtcccatgccccccccc
gaattcacacaagaggagtagactgcaggaaataatcaaactcaggggtg
aaatcaaccaagtggaaacaagaactattcaaagaattaaccaaacgagg
agttggttctttaagaaaatcaagaagatagacatacccttagccagact
cactagagggcacagggaaagcattctaattaacaaaatcagaaatgaaa
agggagaaataacaacagatcctgaagaaatccataacaccataagatct
gtctacaaaaggctgtactcaacaaaactggagaaccttgatgaaaagga
caagtttctagacaggtaccaggtaccaaagttaaatcaacatcaggtta
atgatctaaacagtcctatatcccctaaagtaatagaagcagtcattaat
agtctcccaaccaaaaaaaagcccaggaccagataggtttagtgcagagt
tctatcataccttcaaagaagatctaatctcagttcttcacaaactattc
cacaaaatagaaacagaaggtactctaccaaactcattctatgaagccac
aattactgcgatacctaaaccacaaaaagaaccaacaaagatagagaact
tcagaccactttcccttatgaatatcgatgcaaaaatactcaataaagtt
ctccctaactgataccaagaacacatcaaaacaatcataaatcctgacca
agtaggtttcatcccagtgaggcagggatggttcaatatacggaaaccca
tcaatgtaatccagtatataaaccaacccaaagacaaaaaccacaggatc
atctcgttagatgcggagaaagcatttgacaaaatccaacacccattcat
gataaaagtcttggaaagatcaggaattcaaggcccacacctaaacatga
taaaagcaatctagagcaaaccagtagccaacatcaaagtaaatggtgag
agctacagcatcccactaaaatcagagactagacaagcttcctctttctc
ctactaatcacattgtacttgaagtcttagcagagcattgacaacaaagc
gatcaagggatacaaatggaagaagaagtcaaaatacttttgcagatgat
atggtagtatatagtgaccctaaaatccatcagagaacttcttgcctgat
aacagcttcatgaaagatctggatagtactaagccatgccttctgtacat
gtcaccggcttgagaagaattacgaacaagtcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37676906_37677868
seq2: B6Ng01-029O03.b_44_987

seq1  GAATTCAAGGCAGAAAAACTGTCACCAGTTGACTAGGAGAAAGTAGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCAGAAAAACTGTCACCAGTTGACTAGGAGAAAGTAGTCAG  50

seq1  TCCCTCAAAAAGCCAAACCCAGCTGATCATTATTAATTCATTAGGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAAAAAGCCAAACCCAGCTGATCATTATTAATTCATTAGGACAAA  100

seq1  AGACTTGTGGGAAATATAAATTGTAGGGCTTTCCTTAAGAGGGTAATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTGGGAAATATAAATTGTAGGGCTTTCCTTAAGAGGGTAATTTC  150

seq1  ACTTATAATCTCAGTAATTCATAATTTGTATCTCACTAAAGAATACCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAATCTCAGTAATTCATAATTTGTATCTCACTAAAGAATACCTGA  200

seq1  AATTTTTGATAAAGATTGAGAAACTTGGACAGAATAAGATTAAAAATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGATAAAGATTGAGAAACTTGGACAGAATAAGATTAAAAATTCA  250

seq1  ACTCCAAACTATAGTCAAATAAATGAATTACAAGAACCATATGAATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAACTATAGTCAAATAAATGAATTACAAGAACCATATGAATTTCT  300

seq1  TTTCTTGTCAAATGTAAAAATCCTAAACACAGTGCAGTTGCAACCATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTCAAATGTAAAAATCCTAAACACAGTGCAGTTGCAACCATATC  350

seq1  AACACAAAATTGTTATATGATATGCAAATCATAGAAAAATGTAACTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAATTGTTATATGATATGCAAATCATAGAAAAATGTAACTATCC  400

seq1  AGAATAGAACTAATTCATTCAGCTAGTACTTCTAATCTGTCAAACTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGAACTAATTCATTCAGCTAGTACTTCTAATCTGTCAAACTCATT  450

seq1  TTACAAACTGAGGTAAGAAAAACAATGAACATTAAAATAGGTAATCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACTGAGGTAAGAAAAACAATGAACATTAAAATAGGTAATCTTGT  500

seq1  GTTGAGGGAAATATTAAAAAATGAACCTGCCAACTATCTGCATGGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGGAAATATTAAAAAATGAACCTGCCAACTATCTGCATGGCTGGA  550

seq1  CCATGTTCCCATGCTTTGCTGCTGCCAACAACTCTCTCCAGCTAGCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCCCATGCTTTGCTGCTGCCAACAACTCTCTCCAGCTAGCCCCT  600

seq1  GCAGCATCTGGCTTTCTTGTCCCCGAGGAGCCACTAGTTCCCTCTCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATCTGGCTTTCTTGTCCCCGAGGAGCCACTAGTTCCCTCTCTGCT  650

seq1  ATAATCCCCTGTAACCCTTGGTCCCACACTCCAGTAGCATAGCGCCCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCCCTGTAACCCTTGGTCCCACACTCCAGTAGCATAGCGCCCCCC  700

seq1  CCCCCACCCGCTGTGCTTATTGCTGTGTTCCCAGCTCTCTTTCACTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCGCTGTGCTTATTGCTGTGTTCCCAGCTCTCTTTCACTCCTC  750

seq1  CCTGGCACACTAGTTCTTCCTCAGCCATAAACCCATGTAGTCGGCAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACACTAGTTCTTCCTCAGCCATAAACCCATGTAGTCGGCAATCC  800

seq1  CACATTCCAGTAACTAAATGGAACCACCAACTTCTTGATTGCATATCACA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  CACATTCCAGTAACTAAATGGAACCACCAACTTC-TGATTGCATATCAC-  848

seq1  ATACCCAGAAACCCAGTAAAATCAAGACTCTTTTTTTTTTAAATTTTTTT  900
      |||||||| |||||||| ||||| ||||||||||||||   |||||||||
seq2  ATACCCAG-AACCCAGT-AAATC-AGACTCTTTTTTTT---AATTTTTTT  892

seq1  TATTACGTATTTTCCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCC  950
         |||||||||  ||||  ||||||||  |||||||||| |||||  ||
seq2  --ATACGTATTT--CTCA--TACATTTC--ATGCTATCCC-AAAGT--CC  931

seq1  CATGCCCCCCCCC  963
      |||||||||||||
seq2  CATGCCCCCCCCC  944