BAC Information

Click to search

BAC

Clone NameB6Ng01-032E17
Chromosome17 (Build37)
Map Location 45,062,048 - 45,207,331
singlet/doubletdoublet
Overlap geneSupt3h
Upstream geneDscr1l1, Enpp5, Enpp4, Clic5, Runx2, 4930564C03Rik
Downstream geneEG210562, EG668314, Cdc5l, Spats1, EG668319, Aars2, Tcte1, Gm323, Nfkbie, Slc35b2, Hsp90ab1, Slc29a1, EG653016, Capn11, Tmem63b, Mrpl14, LOC100043363, Vegfa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E17.bB6Ng01-032E17.g
ACCDH861675DH861676
length997978
definitionDH861675|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E17, 5' end.DH861676|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,206,771 - 45,207,331)(45,062,048 - 45,062,871)
sequence
gaattccttgctgttttaaaccatctacttgatgaggccatagaactctt
gatgtgtagttgccactgaaaacacttaacacagaaaaacatgtggctag
caattctacttttaggcacaaagcctaaggaattgaaagtagaaacctac
actgagacttatgcattaatattcatggtgtagggatggagagatgagtc
acttagtggttaagaacactggttgaaaattataaggactgagatttgga
tccccacacccatgtaatgtacttttcaaatgcctgtaactccagctcca
tgggatacaccaccctcttctaatctctgtgtgtacacatgtgtgcatgt
actcacatagacatatacatgaacacatacattttgggctagcaagaagg
ttgaacagtaaagggtcttaccgccaaggctgatgactttagtttgattc
ctaaaagctgcatggtggaaggagagaactgactttttcaagttgtcatt
tgactttcccatacacacacacacacacacacacacacacacacacacac
acacacacacacacagagtgttaagtaattaaagaaagtatttgtaatag
cagtatttacagtagcgaagttgtggaagcaacccatatatcatacaatg
gatgaagagataaataaaatgcagtatgtaggtaggcacagtgaagtact
actcagctttataagagaataaagtctcaacacactacaatatagatgaa
tcttggctgaaaagacgagaatgccagacatcatggagtcccacctgggg
agatactgagaataggcaaattcatggagaaaggagaagagagttaccag
ggcctaggaaagaagggagggcattgtttaaagagcatagagttcagaac
actgaattctggaaacagcctggtgatggctgcacatggtgatggaaaaa
aatgctacagagctgtgcaactggaggaggctcagtggtagctttat
gaattccagaagtgaacaattaaattcattttaaattacaatccattgca
agtcttgtggtgaatctattgcaatcaccttaccccagatgtatattacc
tttgtcccaatatctatgttatatgtacccacctgtccattagccaccta
gcttcctccatagttaccagactgattggtgatatataggttctagtgtt
caagaaatttatttaagagagatgttacatttataaaactttctacaaat
tcccttgtgatgttggatgcaaagtagcccaaatagaaggggaaattgtt
tgcttattttttaatgtaaatattgttaaccacacacttatagacatttg
aactttgacaaagaagccaaaaatatacaatggaaaaaagaaagcatcct
caataaatggtgctggtctaactggcaatctgtatgtagaaaaatgaaaa
tagatccatatttgtcaccttgtacaaagcccaagtccaaatgtattgag
gaccttaacataaacccagatacactgaatctaatagaagagaaaattgg
aaagagcctcaaactcactggcacaggggggaaatgttctaaacagaact
ccaatggttcaggctctaagatcaagaattgataaatggaacctcatgaa
acgggacaacttttataaggcaaaggacatagctaataagacaaattgcc
aacctacagatggggaaaaagttttcgctaaccccatatcctatagaaag
ctaatatccaaaaaataaagaactcaagaagttaccaccaagaaactgaa
caacccaatcaaaaaaattaaaaaatggggtgtagaactaaacagagaat
tcacagcaaaggatctcgaatggctgagaacacctaaagaaatgttcagg
tccttagtgatcagggaagttcaatcacatgaacctgagattaaccttac
aataatcataatggctaggtcaaaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_45206771_45207331
seq2: B6Ng01-032E17.b_46_606 (reverse)

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA  50

seq1  TGGGAAAGTCAAATGACAACTTGAAAAAGTCAGTTCTCTCCTTCCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGTCAAATGACAACTTGAAAAAGTCAGTTCTCTCCTTCCACCAT  100

seq1  GCAGCTTTTAGGAATCAAACTAAAGTCATCAGCCTTGGCGGTAAGACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTTTAGGAATCAAACTAAAGTCATCAGCCTTGGCGGTAAGACCCT  150

seq1  TTACTGTTCAACCTTCTTGCTAGCCCAAAATGTATGTGTTCATGTATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTCAACCTTCTTGCTAGCCCAAAATGTATGTGTTCATGTATATG  200

seq1  TCTATGTGAGTACATGCACACATGTGTACACACAGAGATTAGAAGAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTGAGTACATGCACACATGTGTACACACAGAGATTAGAAGAGGGT  250

seq1  GGTGTATCCCATGGAGCTGGAGTTACAGGCATTTGAAAAGTACATTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATCCCATGGAGCTGGAGTTACAGGCATTTGAAAAGTACATTACAT  300

seq1  GGGTGTGGGGATCCAAATCTCAGTCCTTATAATTTTCAACCAGTGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGGGATCCAAATCTCAGTCCTTATAATTTTCAACCAGTGTTCTT  350

seq1  AACCACTAAGTGACTCATCTCTCCATCCCTACACCATGAATATTAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTAAGTGACTCATCTCTCCATCCCTACACCATGAATATTAATGCA  400

seq1  TAAGTCTCAGTGTAGGTTTCTACTTTCAATTCCTTAGGCTTTGTGCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCAGTGTAGGTTTCTACTTTCAATTCCTTAGGCTTTGTGCCTAA  450

seq1  AAGTAGAATTGCTAGCCACATGTTTTTCTGTGTTAAGTGTTTTCAGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAATTGCTAGCCACATGTTTTTCTGTGTTAAGTGTTTTCAGTGGC  500

seq1  AACTACACATCAAGAGTTCTATGGCCTCATCAAGTAGATGGTTTAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACACATCAAGAGTTCTATGGCCTCATCAAGTAGATGGTTTAAAACA  550

seq1  GCAAGGAATTC  561
      |||||||||||
seq2  GCAAGGAATTC  561

seq1: chr17_45062048_45062871
seq2: B6Ng01-032E17.g_68_890

seq1  GAATTCCAGAAGTGAACAATTAAATTCATTTTAAATTACAATCCATTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGTGAACAATTAAATTCATTTTAAATTACAATCCATTGCA  50

seq1  AGTCTTGTGGTGAATCTATTGCAATCACCTTACCCCAGATGTATATTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGTGGTGAATCTATTGCAATCACCTTACCCCAGATGTATATTACC  100

seq1  TTTGTCCCAATATCTATGTTATATGTACCCACCTGTCCATTAGCCACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCAATATCTATGTTATATGTACCCACCTGTCCATTAGCCACCTA  150

seq1  GCTTCCTCCATAGTTACCAGACTGATTGGTGATATATAGGTTCTAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCCATAGTTACCAGACTGATTGGTGATATATAGGTTCTAGTGTT  200

seq1  CAAGAAATTTATTTAAGAGAGATGTTACATTTATAAAACTTTCTACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAATTTATTTAAGAGAGATGTTACATTTATAAAACTTTCTACAAAT  250

seq1  TCCCTTGTGATGTTGGATGCAAAGTAGCCCAAATAGAAGGGGAAATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTGATGTTGGATGCAAAGTAGCCCAAATAGAAGGGGAAATTGTT  300

seq1  TGCTTATTTTTTAATGTAAATATTGTTAACCACACACTTATAGACATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTTTTTAATGTAAATATTGTTAACCACACACTTATAGACATTTG  350

seq1  AACTTTGACAAAGAAGCCAAAAATATACAATGGAAAAAAGAAAGCATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGACAAAGAAGCCAAAAATATACAATGGAAAAAAGAAAGCATCCT  400

seq1  CAATAAATGGTGCTGGTCTAACTGGCAATCTGTATGTAGAAAAATGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGGTGCTGGTCTAACTGGCAATCTGTATGTAGAAAAATGAAAA  450

seq1  TAGATCCATATTTGTCACCTTGTACAAAGCCCAAGTCCAAATGTATTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCATATTTGTCACCTTGTACAAAGCCCAAGTCCAAATGTATTGAG  500

seq1  GACCTTAACATAAACCCAGATACACTGAATCTAATAGAAGAGAAAATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAACATAAACCCAGATACACTGAATCTAATAGAAGAGAAAATTGG  550

seq1  AAAGAGCCTCAAACTCACTGGCACAGGGGGGAAATGTTCTAAACAGAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCTCAAACTCACTGGCACAGGGGGGAAATGTTCTAAACAGAACT  600

seq1  CCAATGGTTCAGGCTCTAAGATCAAGAATTGATAAATGGAACCTCATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGTTCAGGCTCTAAGATCAAGAATTGATAAATGGAACCTCATGAA  650

seq1  ACGGGACAACTTTTATAAGGCAAAGGACATAGCTAATAAGACAAATTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGACAACTTTTATAAGGCAAAGGACATAGCTAATAAGACAAATTGCC  700

seq1  AACCTACAGATGGGGAAAAAGTTTTCGCTAACCCCATATCCTATAGAAGG  750
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACCTACAGATGGGGAAAAAGTTTTCGCTAACCCCATATCCTATAGAAAG  750

seq1  CTAATATCCAAAAAATAAAGAACTCAAGAAGTTAACCACCAAGAAACTGA  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAATATCCAAAAAATAAAGAACTCAAGAAGTT-ACCACCAAGAAACTGA  799

seq1  ACAACCCAATCAAAAAAATTAAAA  824
      ||||||||||||||||||||||||
seq2  ACAACCCAATCAAAAAAATTAAAA  823