BAC Information

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BAC

Clone NameB6Ng01-032H14
Chromosome17 (Build37)
Map Location 51,222,149 - 51,358,219
singlet/doubletdoublet
Overlap geneTbc1d5, LOC100043451
Upstream geneRftn1, EG668475, EG628747, LOC100043818, Dazl, Plcl2, EG654432
Downstream geneLOC100043452, Satb1, EG628919
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032H14.bB6Ng01-032H14.g
ACCDH861800DH861801
length474562
definitionDH861800|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H14, 5' end.DH861801|Mus musculus domesticus DNA, BAC clone: B6Ng01-032H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,357,740 - 51,358,219)(51,222,149 - 51,222,716)
sequence
tttctccctagatatgtttaagtctgtgtcaagttggcagacatcaacca
gcacaagtaccttcttaagaatggtagtgattcaggccaaggtctggaaa
gtaagaaaggctaggctggctcagtgtagtgatatcctggaacttatacc
ctggataagcagtggagggtggagagaaaggccatctcatcatgaataca
ttaggccagtgctgtagggacgagaactctagctcttaatagtagtgctg
caaagagggcaccctcaagttgagtcccagaatgtcaaaatccaggccca
gactatcgagggcatttaggaaatctagatttgtaggtaaagatacaaat
gtggatacaaagtttattgttaacaagatccagtctaagcactgtacatt
ggtgattattggcttccaaaaatgagagggagggagtaagggaaggagca
ggaagggagagagagagggggagg
tcttctcactccaaacaaaactcaaaattgtgtatttgaaagactgacct
tcagacataactatgactcttcagacataacctaacacataagttaagaa
agaagtctacatgaccacagtaacatcacaacattactaaaaaaataaaa
taaaataaaaaataaaaaaatactgtcacaacaatagtctccaccatgaa
aacaaacatgaaaacatagtagtttcataattgttttccaataagaatta
tttagatgaatcccaggacaaagaatttaggacatcctgagtttttcagt
caaatggatggaactagaaaatattatcctgagtaaggtaactcagaccc
agaagggtgtatactcactaataagtggatagtagccaaaaagaaaagta
tagactacccaagatatcatccatagaaatcaaaaaggtcaacgagctga
aggacccaagtgaggatacctcagtcccacttgggagggagaagaaagca
ccataagagggaaggagggaagaatctgggagggaaaagggacaggggtg
tggaggaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_51357740_51358219
seq2: B6Ng01-032H14.b_46_525 (reverse)

seq1  CCTCCCCCTCTCTCTCTCCCTTCCTGCTCCTTCCCTTACTCCCTCCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTCTCTCTCTCCCTTCCTGCTCCTTCCCTTACTCCCTCCCTCT  50

seq1  CATTTTTGGAAGCCAATAATCACCAATGTACAGTGCTTAGACTGGATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGGAAGCCAATAATCACCAATGTACAGTGCTTAGACTGGATCTT  100

seq1  GTTAACAATAAACTTTGTATCCACATTTGTATCTTTACCTACAAATCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACAATAAACTTTGTATCCACATTTGTATCTTTACCTACAAATCTAG  150

seq1  ATTTCCTAAATGCCCTCGATAGTCTGGGCCTGGATTTTGACATTCTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAAATGCCCTCGATAGTCTGGGCCTGGATTTTGACATTCTGGGA  200

seq1  CTCAACTTGAGGGTGCCCTCTTTGCAGCACTACTATTAAGAGCTAGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTTGAGGGTGCCCTCTTTGCAGCACTACTATTAAGAGCTAGAGTT  250

seq1  CTCGTCCCTACAGCACTGGCCTAATGTATTCATGATGAGATGGCCTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCCCTACAGCACTGGCCTAATGTATTCATGATGAGATGGCCTTTCT  300

seq1  CTCCACCCTCCACTGCTTATCCAGGGTATAAGTTCCAGGATATCACTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCTCCACTGCTTATCCAGGGTATAAGTTCCAGGATATCACTACA  350

seq1  CTGAGCCAGCCTAGCCTTTCTTACTTTCCAGACCTTGGCCTGAATCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCAGCCTAGCCTTTCTTACTTTCCAGACCTTGGCCTGAATCACTA  400

seq1  CCATTCTTAAGAAGGTACTTGTGCTGGTTGATGTCTGCCAACTTGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTAAGAAGGTACTTGTGCTGGTTGATGTCTGCCAACTTGACACA  450

seq1  GACTTAAACATATCTAGGGAGAAAGAATTC  480
      ||||||||||||||||||||||||||||||
seq2  GACTTAAACATATCTAGGGAGAAAGAATTC  480

seq1: chr17_51222149_51222716
seq2: B6Ng01-032H14.g_67_634

seq1  GAATTCTCTTCTCACTCCAAACAAAACTCAAAATTGTGTATTTGAAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTCACTCCAAACAAAACTCAAAATTGTGTATTTGAAAGAC  50

seq1  TGACCTTCAGACATAACTATGACTCTTCAGACATAACCTAACACATAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCAGACATAACTATGACTCTTCAGACATAACCTAACACATAAGT  100

seq1  TAAGAAAGAAGTCTACATGACCACAGTAACATCACAACATTACTAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGAAGTCTACATGACCACAGTAACATCACAACATTACTAAAAAA  150

seq1  ATAAAATAAAATAAAAAATAAAAAAATACTGTCACAACAATAGTCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAAAATAAAAAAATACTGTCACAACAATAGTCTCCAC  200

seq1  CATGAAAACAAACATGAAAACATAGTAGTTTCATAATTGTTTTCCAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAACAAACATGAAAACATAGTAGTTTCATAATTGTTTTCCAATAA  250

seq1  GAATTATTTAGATGAATCCCAGGACAAAGAATTTAGGACATCCTGAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTAGATGAATCCCAGGACAAAGAATTTAGGACATCCTGAGTTT  300

seq1  TTCAGTCAAATGGATGGAACTAGAAAATATTATCCTGAGTAAGGTAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAAATGGATGGAACTAGAAAATATTATCCTGAGTAAGGTAACTC  350

seq1  AGACCCAGAAGGGTGTATACTCACTAATAAGTGGATAGTAGCCAAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGAAGGGTGTATACTCACTAATAAGTGGATAGTAGCCAAAAAGA  400

seq1  AAAGTATAGACTACCCAAGATATCATCCATAGAAATCAAAAAGGTCAACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATAGACTACCCAAGATATCATCCATAGAAATCAAAAAGGTCAACG  450

seq1  AGCTGAAGGACCCAAGTGAGGATACCTCAGTCCCACTTGGGAGGGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGGACCCAAGTGAGGATACCTCAGTCCCACTTGGGAGGGAGAAG  500

seq1  AAAGCACCATAAGAGGGAAGGAGGGAAGAATCTGGGAGGGAAAAGGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACCATAAGAGGGAAGGAGGGAAGAATCTGGGAGGGAAAAGGGACA  550

seq1  GGGGTGTGGAGGAGGGGT  568
      ||||||||||||||||||
seq2  GGGGTGTGGAGGAGGGGT  568