BAC Information

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BAC

Clone NameB6Ng01-033E01
Chromosome17 (Build37)
Map Location 63,541,181 - 63,542,091
singlet/doubletsinglet
Overlap geneFbxl17
Upstream geneEfna5
Downstream genePpia-ps17_1026.1, LOC638867, LOC668677, A930002H24Rik, Fert2, LOC669778
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033E01.bB6Ng01-033E01.g
ACCDH862358DH862359
length9131,169
definitionDH862358|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E01, 5' end.DH862359|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagagatgtattcatattgcagacaaagtgatatctgaaatat
tctgtgtttcatgttcgttgctctaacgtttaacttaacatgacttgctg
tctgactttacatttcatctcatgttcttctcttctctaaagaagaagac
taacttgtgagaattgacatcttttgtaaatagaaaccaaacataccaat
aagaaatctcttttagaataattctctatttcagggttgggttttttttt
taaacattatctttgccaaagtttgtttgccaaggaaaaacctatttttt
actccatagagcaagcatcagtctgtattagactctgaagtgtttattcc
actacgggtatattttttttatttatttattcactcagttgttcttttac
acatttattctggtcacttggtagagtaaactgaagacaagggtgcagat
tatatttctgatcagaaatgtagcatcttgtaaccacagtaggcattatc
ataagcttccaaagttattagttttttaaagactccacaaaaagcaacgc
agtcttctgtccccattttctaacttcagcagagaccacaggcaccaagt
ggctcgtctgtgccttcctccctctctcacaaacactactgtctgtttgt
ttttgtttttcagagaaaagcacccaaagatagcgattcatttaaaatta
gcaattagtatactatgtggtcacttaatgaacagcttttgggctattta
gcacttggcctcttttcctcggctatttgcagatttctggctgttgccat
ttgtcccttacatggtgtcactgcttcacacattggggatatgttttttt
taaaaaaaaaaaacaaaaaaaaaaaaacccttggaattagttaccagctt
ccccacttctgat
gaattctcacctgaggaatacctaatggcagagaagcacctgaaaaaaat
gctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgactaagatcaaaaattcaggtgacag
cagatgctggagaggatgtggagaaaaaggaacactcctccattgatgat
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactactggaggatcccgcaatatctctcctggg
catatatccagaagatgtcccaactggtaagaaggacacatgctccacta
tgttcatagcagcctcatttataatagccagaagaagctggaaagaaccc
agatgcccctcaacataggaatggatacagaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
ccaaatggatggacctggagggcatcatcctgagtgaggaaacacattcg
caaaggaactcacacaatatgtactcactgataagtggatattagcccaa
aacctaggatacccaagatataagatacaatttgctaaacacgtgaaact
caagaagaatgaagactgaagtgtggacactatgcccctccttagaaatg
ggaacaaaacacccatggaaggagttacagagacaaagtttggagctgag
atgaaaggatggaccatctagagactgccatatccagggatccaccccat
aatcagcttccaaacgctgacaccattgcatacactagcaagattttatc
gaaaggacctagatgtagctgtctcttgtgagactatgccggggcctggc
aaacacagaagtggatgctcacagtcagctattggatggatcccagggct
tccaaaggaggagtaaagaaagtacccaaggagctaaagggatctgcaac
cttataggtgaacaacattatgaactaccagtacacagagcttcttgact
ctagctgcatatgtatcaaagtagctattcggcctcctgtaagaaaggcc
attggacagcatcgtattgcctagatcgggaagctcatgtcaaacaatgg
tatgtgtgtaggaacgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_63541181_63542091
seq2: B6Ng01-033E01.b_40_952 (reverse)

seq1  ATCAG-AGTGGCGAAGCTGGTAACTAATTCCAAGGGTTTTTTTTTTTTGT  49
      ||||| ||||| ||||||||||||||||||||||||||||||||||||  
seq2  ATCAGAAGTGGGGAAGCTGGTAACTAATTCCAAGGGTTTTTTTTTTTTTG  50

seq1  TTTTTTTTTTTAAAAAAAAACATAT-CCCAATGTGTGAAGCAGTGACACC  98
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAAAAAAAACATATCCCCAATGTGTGAAGCAGTGACACC  100

seq1  ATGTAAGGGACAAATGGCAACAGCCAGAAATCTGCAAATAGCCGAGGAAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGGGACAAATGGCAACAGCCAGAAATCTGCAAATAGCCGAGGAAA  150

seq1  AGAGGCCAAGTGCTAAATAGCCCAAAAGCTGTTCATTAAGTGACCACATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCAAGTGCTAAATAGCCCAAAAGCTGTTCATTAAGTGACCACATA  200

seq1  GTATACTAATTGCTAATTTTAAATGAATCGCTATCTTTGGGTGCTTTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACTAATTGCTAATTTTAAATGAATCGCTATCTTTGGGTGCTTTTCT  250

seq1  CTGAAAAACAAAAACAAACAGACAGTAGTGTTTGTGAGAGAGGGAGGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAACAAAAACAAACAGACAGTAGTGTTTGTGAGAGAGGGAGGAAG  300

seq1  GCACAGACGAGCCACTTGGTGCCTGTGGTCTCTGCTGAAGTTAGAAAATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGACGAGCCACTTGGTGCCTGTGGTCTCTGCTGAAGTTAGAAAATG  350

seq1  GGGACAGAAGACTGCGTTGCTTTTTGTGGAGTCTTTAAAAAACTAATAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAAGACTGCGTTGCTTTTTGTGGAGTCTTTAAAAAACTAATAAC  400

seq1  TTTGGAAGCTTATGATAATGCCTACTGTGGTTACAAGATGCTACATTTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGCTTATGATAATGCCTACTGTGGTTACAAGATGCTACATTTCT  450

seq1  GATCAGAAATATAATCTGCACCCTTGTCTTCAGTTTACTCTACCAAGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAAATATAATCTGCACCCTTGTCTTCAGTTTACTCTACCAAGTGA  500

seq1  CCAGAATAAATGTGTAAAAGAACAACTGAGTGAATAAATAAATAAAAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATAAATGTGTAAAAGAACAACTGAGTGAATAAATAAATAAAAAAA  550

seq1  ATATACCCGTAGTGGAATAAACACTTCAGAGTCTAATACAGACTGATGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCGTAGTGGAATAAACACTTCAGAGTCTAATACAGACTGATGCT  600

seq1  TGCTCTATGGAGTAAAAAATAGGTTTTTCCTTGGCAAACAAACTTTGGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTATGGAGTAAAAAATAGGTTTTTCCTTGGCAAACAAACTTTGGCA  650

seq1  AAGATAATGTTTAAAAAAAAAACCCAACCCTGAAATAGAGAATTATTCTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATGTTTAAAAAAAAAACCCAACCCTGAAATAGAGAATTATTCTA  700

seq1  AAAGAGATTTCTTATTGGTATGTTTGGTTTCTATTTACAAAAGATGTCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATTTCTTATTGGTATGTTTGGTTTCTATTTACAAAAGATGTCAA  750

seq1  TTCTCACAAGTTAGTCTTCTTCTTTAGAGAAGAGAAGAACATGAGATGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAAGTTAGTCTTCTTCTTTAGAGAAGAGAAGAACATGAGATGAA  800

seq1  ATGTAAAGTCAGACAGCAAGTCATGTTAAGTTAAACGTTAGAGCAACGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGTCAGACAGCAAGTCATGTTAAGTTAAACGTTAGAGCAACGAA  850

seq1  CATGAAACACAGAATATTTCAGATATCACTTTGTCTGCAATATGAATACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAACACAGAATATTTCAGATATCACTTTGTCTGCAATATGAATACA  900

seq1  TCTCTGGGAATTC  911
      |||||||||||||
seq2  TCTCTGGGAATTC  913