BAC Information

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BAC

Clone NameB6Ng01-036M03
Chromosome17 (Build37)
Map Location 39,449,515 - 39,450,555
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr762-ps1, Olfr136, LOC626985, LOC100043297
Downstream geneLOC100043300, EG668200, LOC672857, LOC627695, LOC634967, Pgk2, Crisp3, Crisp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036M03.bB6Ng01-036M03.g
ACCDH864830DH864831
length1,1501,025
definitionDH864830|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M03, 5' end.DH864831|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
tacatcatccttaatcatcagggaaatgcaaatcaaaacagccatgagat
tcaatctcataccaataagaatggctaagatcaaaaattgaggtgacagc
agatgctggcaaggatgtggagaaagaggaaccctccctcatttttggtg
ggattgcaagattgcacaaccactctggaaatcagtttggcagttcctca
gaaaattagacatagtactaccagagaatcctgcaataccactcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcataacagcattatttataatagccagattttggaaagaaactagat
gcccctcaacagaggaatggatacagaaaatctgatacatttacacaatg
gagtactattcagctattaaaaaagaaagaatttatgaaatttctaggca
aatggttggacctggagggtatcatcctgagtgaggtaacacaataacaa
aagaactcaaatgatatgtactcactgataagcggatattagcccagaaa
cttagtatacccgagatataagagacaatttgtaaaacacatgaaactga
agaagaatgaagaccaaagtgtggacactttgccccttcttagaattgga
aacaatcacccatggaaagagttacagagacaaagtttggaggtgagacg
aaagaatggaccatctagagactgccatatgcagcgatccatcccaataa
ttagcctccaaagatgacaccattgcatacactagcaagcgtttgctgaa
aggaccctgattatagctgtctcttgtggagactaggcaagggcctaggg
acacataattggatgctcccagtcagctatttgaatggatcacagggccc
tattgaagaactagagaagtatccagagctaaggactgcaccatgtagtg
cacacatatgtataacagtaccggagctcttgatcttagctgctatgtat
caaagaaggctagcgtccatctggaagacagccatgactcgcaacttatt
ccagtacagggaaccctggcaaaaggtgtatggatagggtaggagatgtg

gaattccagcagaggggatgagtcctgagtctgttacttccacaggtgtt
gcaactgctgtggttatttgggatggtccttcacctgttgcactgggtgc
tgcagatctgctggaaggcttttagaagaaggcctgtggggtctgctgag
ggacagaaacactgattacctgccctggcagaaagtacaggcaggaaggc
agtagagtttgagtggagtggatggatcccaattatgctggccacctaag
gctattgtagctgctgcacttattgggaatgctcctttcctgttgcattg
ggcagagatctaacaggcctttagacttttgcatctgttgaactgggtgc
accagatctcctgagaggccttcaaactatagggtctacaaaggggcaga
ccccatatcattttcatacaccctacatttaattgaccatgtttcttccc
tttcttcaactcaatttttttcctgattgtacttttctgaagtgagatgt
accctctctaaattcactttacatgggttctactgtccccagattttatt
attacatttccctaccaaattgtattaaactggattccctccatatataa
ctctaatttaaacacagatgttgcataaatgtatcatcataacacaagaa
aggaaaactctgcatttaactttgtatgccctaggaaatatcccatgaga
gtttattctccttcccttccatttcctgaaaattatgcaacttagttttt
ctttatgttttagtaatttcttattgtgtcatggatcataattttttatg
tcttaatcaggtgatggacactagattgattctatttcattccttttgtg
aacaaggcagaaataaccagatgcacaaatataatgcagaggactaaaga
ctttgacgtatttgacaagtgatgacgtggatcacaggtatctatttgat
atttttgatactcatggactgacgtcaaagtgctgtgcttgcagtctgtc
actgtgtagagaattctgtcatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39449515_39450555
seq2: B6Ng01-036M03.g_68_1092

seq1  GAATTCCAGCAGAGGGGATGAGTCCTGAGTCTGTTACTTCCACAGGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAGAGGGGATGAGTCCTGAGTCTGTTACTTCCACAGGTGTT  50

seq1  GCAACTGCTGTGGTTATTTGGGATGGTCCTTCACCTGTTGCACTGGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGCTGTGGTTATTTGGGATGGTCCTTCACCTGTTGCACTGGGTGC  100

seq1  TGCAGATCTGCTGGAAGGCTTTTAGAAGAAGGCCTGTGGGGTCTGCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATCTGCTGGAAGGCTTTTAGAAGAAGGCCTGTGGGGTCTGCTGAG  150

seq1  GGACAGAAACACTGATTACCTGCCCTGGCAGAAAGTACAGGCAGGAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAACACTGATTACCTGCCCTGGCAGAAAGTACAGGCAGGAAGGC  200

seq1  AGTAGAGTTTGAGTGGAGTGGATGGATCCCAATTATGCTGGCCACCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTTTGAGTGGAGTGGATGGATCCCAATTATGCTGGCCACCTAAG  250

seq1  GCTATTGTAGCTGCTGCACTTATTGGGAATGCTCCTTTCCTGTTGCATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGTAGCTGCTGCACTTATTGGGAATGCTCCTTTCCTGTTGCATTG  300

seq1  GGCAGAGATCTAACAGGCCTTTAGACTTTTGCATCTGTTGAACTGGGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGATCTAACAGGCCTTTAGACTTTTGCATCTGTTGAACTGGGTGC  350

seq1  ACCAGATCTCCTGAGAGGCCTTCAAACTATAGGGTCTACAAAGGGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATCTCCTGAGAGGCCTTCAAACTATAGGGTCTACAAAGGGGCAGA  400

seq1  CCCCATATCATTTTCATACACCCTACATTTAATTGACCATGTTTCTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATCATTTTCATACACCCTACATTTAATTGACCATGTTTCTTCCC  450

seq1  TTTCTTCAACTCAATTTTTTTCCTGATTGTACTTTTCTGAAGTGAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAACTCAATTTTTTTCCTGATTGTACTTTTCTGAAGTGAGATGT  500

seq1  ACCCTCTCTAAATTCACTTTACATGGGTTCTACTGT-CCCAGA-TTTATT  548
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  ACCCTCTCTAAATTCACTTTACATGGGTTCTACTGTCCCCAGATTTTATT  550

seq1  ATTACA-TTCCCTACCAATTTGTATTAAACTGGATT-CCTCCATATAT-A  595
      |||||| ||||||||||| ||||||||||||||||| ||||||||||| |
seq2  ATTACATTTCCCTACCAAATTGTATTAAACTGGATTCCCTCCATATATAA  600

seq1  CTCTAATTTAAACACAGATGTTGCATAAATGTATCATCATAACACAAGAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTAAACACAGATGTTGCATAAATGTATCATCATAACACAAGAA  650

seq1  AGG-AAACTCTGCATTTAACTTTGTATG-CCTAGGAAATATCTCATGAGA  693
      ||| |||||||||||||||||||||||| ||||||||||||| |||||||
seq2  AGGAAAACTCTGCATTTAACTTTGTATGCCCTAGGAAATATCCCATGAGA  700

seq1  GTTTATTCTCCTT-CCTTCCATTTCCTGAAAATTATGCAACTTAGTTTTT  742
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTCCTTCCCTTCCATTTCCTGAAAATTATGCAACTTAGTTTTT  750

seq1  CTTTATGTTTTAGTAATTTCTTATTGTGTTCATGGATCAT-ATTTTTTAT  791
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  CTTTATGTTTTAGTAATTTCTTATTGTG-TCATGGATCATAATTTTTTAT  799

seq1  GTCTTATTCAGGTGATGGACACCTAGATTGATTCTATTTCATTCCTCTTG  841
      |||||| |||||||||||||| |||||||||||||||||||||||| |||
seq2  GTCTTAATCAGGTGATGGACA-CTAGATTGATTCTATTTCATTCCTTTTG  848

seq1  TGAACAAGGCAGAAATAAACACAGATGCACAAATATTAATGCAGAGGACT  891
      ||||||||||||||||||   |||||||||||||| ||||||||||||||
seq2  TGAACAAGGCAGAAATAA--CCAGATGCACAAATA-TAATGCAGAGGACT  895

seq1  AAAAAGACTTTGACGTATTTGACCAAAGGTGATGACAGTGGATCACAGGT  941
        |||||||||||||||||||||   | |||||||| |||||||||||| 
seq2  --AAAGACTTTGACGTATTTGAC---AAGTGATGAC-GTGGATCACAGG-  938

seq1  TATTCCTATTTTGATATTTTTGATAACTCATGGACTGACGTCAAAAGTCG  991
      |||  ||| ||||||||||||||| ||||||||||||||||| ||||| |
seq2  TAT--CTA-TTTGATATTTTTGAT-ACTCATGGACTGACGTC-AAAGT-G  982

seq1  CTGTGCTTTTGCAGTCTGTCAACTGTGTTTAAGAGATCTCTGTCCATCAT  1041
      ||||||  |||||||||||| |||||||   |||||  ||||| ||||||
seq2  CTGTGC--TTGCAGTCTGTC-ACTGTGT---AGAGAATTCTGT-CATCAT  1025