BAC Information

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BAC

Clone NameB6Ng01-037F19
Chromosome17 (Build37)
Map Location 11,874,803 - 11,991,943
singlet/doubletdoublet
Overlap genePark2
Upstream genePacrg, LOC100041113
Downstream geneAgpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037F19.bB6Ng01-037F19.g
ACCDH865251DH865252
length626870
definitionDH865251|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F19, 5' end.DH865252|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,874,803 - 11,875,427)(11,991,074 - 11,991,943)
sequence
gaattcttagcagacagagtttgccaaagcacactgaatgatacagcaca
tctctgaatccaccagggtgctatttttacatagagtaaatgtcgtttct
attatgtgaaacgaactaaattttatttcagtccctctctgcaggaacga
gagtctcctagcagagacccagatttacaagcacactgacgggagcctca
gaccacaagctctgatttgtgcagggcagtcaatgccctcatttccagcc
ccacagtgcacccgccttctcccagtgtaatggtcattgaatgtgctgga
gtaaatgtgggacgtatttcatttgaaaggagaaaacacagagctgctgt
agttaaccttctgctctgacagtgtacggtagatcaaacattcaagagca
gtaatgggaactggggcggagggactctttccagtgtgcctcaagtgccc
ggcatggggactttgtcagaatcctctcactgtgtgcatgctccaaccct
gaaaatgaagaatcttctctatttcatgcaagaggaagctaagaattaaa
gtcaattgatcttcccaagatactggagcgctaaaggactccaaatgcct
ccaaagctcttggggggggggggggg
gaattccctataagaagatggcagttagagaatagttacacgttctcaga
catcaccgaagaaacaatgtatttttgcaaataccaaataatcaagtttc
cctagttaagaaaaccacatttctttccttcctatgtccctctttcctct
ctccctttcctttgggcccctctttatcactctcttctcaccgtttatta
ttaaaactgttaagtcacatttttgcaggtcatggtggacattaggaaag
aattcagaattatgggttctggagcactcagaaggcagagcttaaattca
gcttctattaagaatgaattgcttaatcattctttgggaatcattctttc
tctcccctattcatgatttagctgagtatttgctaatgagaattcagtgg
aaattgacaacaggagcttccagaactatgtgactcttctctaaatcaaa
gttaattcaacagtgactcacagctaataacgcaacctaagaatttaccg
ttcggtattgtgttcacgtcatggcttttctgtttatagcttagaccatt
tagactgtctcagtgacattccagaggctgctcagtgtcacaggagttca
ttgcttacaatcagggaattggaaatctaaggtcaaggccctagagtcca
tgtcacttcctatgggtgagtttattactgtggcatcctcacctggtcta
cagggcacaggagtacactgcaactgatctggccacgcactcttctcaca
gccttcccacatatccagacttcagctccaatactactgtttagcattga
ggatcccacataggaattttgaggtgcacaaattatccagatcatagtga
tttagtttgggggttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_11874803_11875427
seq2: B6Ng01-037F19.b_48_672

seq1  GAATTCTTAGCAGACAGAGTTTGCCAAAGCACACTGAATGATACAGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAGACAGAGTTTGCCAAAGCACACTGAATGATACAGCACA  50

seq1  TCTCTGAATCCACCAGGGTGCTATTTTTACATAGAGTAAATGTCGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAATCCACCAGGGTGCTATTTTTACATAGAGTAAATGTCGTTTCT  100

seq1  ATTATGTGAAACGAACTAAATTTTATTTCAGTCCCTCTCTGCAGGAACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGAAACGAACTAAATTTTATTTCAGTCCCTCTCTGCAGGAACGA  150

seq1  GAGTCTCCTAGCAGAGACCCAGATTTACAAGCACACTGACGGGAGCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCCTAGCAGAGACCCAGATTTACAAGCACACTGACGGGAGCCTCA  200

seq1  GACCACAAGCTCTGATTTGTGCAGGGCAGTCAATGCCCTCATTTCCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAAGCTCTGATTTGTGCAGGGCAGTCAATGCCCTCATTTCCAGCC  250

seq1  CCACAGTGCACCCGCCTTCTCCCAGTGTAATGGTCATTGAATGTGCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGCACCCGCCTTCTCCCAGTGTAATGGTCATTGAATGTGCTGGA  300

seq1  GTAAATGTGGGACGTATTTCATTTGAAAGGAGAAAACACAGAGCTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTGGGACGTATTTCATTTGAAAGGAGAAAACACAGAGCTGCTGT  350

seq1  AGTTAACCTTCTGCTCTGACAGTGTACGGTAGATCAAACATTCAAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACCTTCTGCTCTGACAGTGTACGGTAGATCAAACATTCAAGAGCA  400

seq1  GTAATGGGAACTGGGGCGGAGGGACTCTTTCCAGTGTGCCTCAAGTGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGGAACTGGGGCGGAGGGACTCTTTCCAGTGTGCCTCAAGTGCCC  450

seq1  GGCATGGGGACTTTGTCAGAATCCTCTCACTGTGTGCATGCTCCAACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGGACTTTGTCAGAATCCTCTCACTGTGTGCATGCTCCAACCCT  500

seq1  GAAAATGAAGAATCTTCTCTATTTCATGCAAGAGGAAGCTAAGAATTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAAGAATCTTCTCTATTTCATGCAAGAGGAAGCTAAGAATTAAA  550

seq1  GTCAATTGATCTTCCCAAGATACTGGAGCGCTAAAGGACTCCAAATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGATCTTCCCAAGATACTGGAGCGCTAAAGGACTCCAAATGCCT  600

seq1  CCAAAGCTCTTGGGGGGGGGGGGGG  625
      |||||||||||||||||||||||||
seq2  CCAAAGCTCTTGGGGGGGGGGGGGG  625

seq1: chr17_11991074_11991943
seq2: B6Ng01-037F19.g_70_939 (reverse)

seq1  CCCCCCACCCCCAAACTAAATCACTATGATCTGGAT-ATTTGTGCACCTC  49
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCCCAACCCCCAAACTAAATCACTATGATCTGGATAATTTGTGCACCTC  50

seq1  AAAATTCCTATGTTGGAATCCTCAATGCTAAACAGTAGTATTGGAGCTGA  99
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  AAAATTCCTATG-TGGGATCCTCAATGCTAAACAGTAGTATTGGAGCTGA  99

seq1  AGTCTGGATATGTGGGAAGGCTGTGAGAAGAGTGCGTGGCCAGATCAGTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATATGTGGGAAGGCTGTGAGAAGAGTGCGTGGCCAGATCAGTT  149

seq1  GCAGTGTACTCCTGTGCCCTGTAGACCAGGTGAGGATGCCACAGTAATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTACTCCTGTGCCCTGTAGACCAGGTGAGGATGCCACAGTAATAA  199

seq1  ACTCACCCATAGGAAGTGACATGGACTCTAGGGCCTTGACCTTAGATTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCCATAGGAAGTGACATGGACTCTAGGGCCTTGACCTTAGATTTC  249

seq1  CAATTCCCTGATTGTAAGCAATGAACTCCTGTGACACTGAGCAGCCTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCTGATTGTAAGCAATGAACTCCTGTGACACTGAGCAGCCTCTG  299

seq1  GAATGTCACTGAGACAGTCTAAATGGTCTAAGCTATAAACAGAAAAGCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCACTGAGACAGTCTAAATGGTCTAAGCTATAAACAGAAAAGCCA  349

seq1  TGACGTGAACACAATACCGAACGGTAAATTCTTAGGTTGCGTTATTAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTGAACACAATACCGAACGGTAAATTCTTAGGTTGCGTTATTAGCT  399

seq1  GTGAGTCACTGTTGAATTAACTTTGATTTAGAGAAGAGTCACATAGTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCACTGTTGAATTAACTTTGATTTAGAGAAGAGTCACATAGTTCT  449

seq1  GGAAGCTCCTGTTGTCAATTTCCACTGAATTCTCATTAGCAAATACTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTCCTGTTGTCAATTTCCACTGAATTCTCATTAGCAAATACTCAG  499

seq1  CTAAATCATGAATAGGGGAGAGAAAGAATGATTCCCAAAGAATGATTAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCATGAATAGGGGAGAGAAAGAATGATTCCCAAAGAATGATTAAG  549

seq1  CAATTCATTCTTAATAGAAGCTGAATTTAAGCTCTGCCTTCTGAGTGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCATTCTTAATAGAAGCTGAATTTAAGCTCTGCCTTCTGAGTGCTC  599

seq1  CAGAACCCATAATTCTGAATTCTTTCCTAATGTCCACCATGACCTGCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCCATAATTCTGAATTCTTTCCTAATGTCCACCATGACCTGCAAA  649

seq1  AATGTGACTTAACAGTTTTAATAATAAACGGTGAGAAGAGAGTGATAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACTTAACAGTTTTAATAATAAACGGTGAGAAGAGAGTGATAAAG  699

seq1  AGGGGCCCAAAGGAAAGGGAGAGAGGAAAGAGGGACATAGGAAGGAAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCCAAAGGAAAGGGAGAGAGGAAAGAGGGACATAGGAAGGAAAGA  749

seq1  AATGTGGTTTTCTTAACTAGGGAAACTTGATTATTTGGTATTTGCAAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTTTCTTAACTAGGGAAACTTGATTATTTGGTATTTGCAAAAA  799

seq1  TACATTGTTTCTTCGGTGATGTCTGAGAACGTGTAACTATTCTCTAACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTTCTTCGGTGATGTCTGAGAACGTGTAACTATTCTCTAACTG  849

seq1  CCATCTTCTTATAGGGAATTC  870
      |||||||||||||||||||||
seq2  CCATCTTCTTATAGGGAATTC  870