MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-040D24
Chromosome	17 (Build37)
Map Location	40,666,047 - 40,667,206
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100043300, EG668200, LOC672857, LOC627695, LOC634967, Pgk2, Crisp3, Crisp1, LOC668229
Downstream gene	LOC100043756, EG433107, EG619517, Crisp2, Rhag, 9130008F23Rik, EG435528, Cenpq, Mut, Ldha-ps3, LOC627577
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043300 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs

name	EG668200 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668200 MGI:3647149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs

name	LOC672857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	LOC627695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs

name	LOC634967 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:634967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 2 Proteins

name	Pgk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18663 MGI:97563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crisp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11572 MGI:102552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crisp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11571 MGI:102553
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668229 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668229
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100043756 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043756
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG433107 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433107 MGI:3643294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	EG619517 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619517 MGI:3645915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crisp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22024 MGI:98815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhag (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19743 MGI:1202713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130008F23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71583 MGI:1918833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435528 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435528 MGI:3647683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Cenpq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83815 MGI:1933744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mut (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17850 MGI:97239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldha-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277225 MGI:96762
definition	gene_synonym : Ldh-1ps3; Ldh1-ps3 note : lactate dehydrogenase A, pseudogene 3 pseudo : _no_value

name	LOC627577 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627577
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100043300 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268708 GeneID:100043300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs product : hypothetical protein LOC100043300 transcript_id : XM_001479904.1

name	EG668200 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401979 GeneID:668200 MGI:3647149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs product : predicted gene, EG668200 transcript_id : XM_994896.1

name	LOC627695 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268844 GeneID:627695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs product : hypothetical LOC627695 transcript_id : XM_001480999.1

name	LOC634967 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268848 GeneID:634967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9 ESTs, 2 Proteins product : similar to TGFB-induced factor 2 transcript_id : XM_001481000.1

name	Pgk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13654248 GeneID:18663 MGI:97563
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglycerate kinase 2 transcript_id : NM_031190.1

name	Crisp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114796617 GeneID:11572 MGI:102552
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 3 transcript_id : NM_009639.2

name	Crisp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981913 GeneID:11571 MGI:102553
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 1 transcript_id : NM_009638.2

name	EG433107 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401983 GeneID:433107 MGI:3643294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG433107 transcript_id : XM_488818.3

name	EG619517 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370325 GeneID:619517 MGI:3645915
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG619517 transcript_id : NM_001038500.1

name	Crisp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678422 GeneID:22024 MGI:98815
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich secretory protein 2 transcript_id : NM_009420.1

name	Rhag (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130207 GeneID:19743 MGI:1202713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rhesus blood group-associated A glycoprotein transcript_id : NM_011269.2

name	9130008F23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383729 GeneID:71583 MGI:1918833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130008F23 gene transcript_id : NM_027834.2

name	EG435528 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268711 GeneID:435528 MGI:3647683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG435528 transcript_id : XM_487484.3

name	Cenpq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357205 GeneID:83815 MGI:1933744
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centromere protein Q transcript_id : NM_031863.2

name	Mut (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678969 GeneID:17850 MGI:97239
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylmalonyl-Coenzyme A mutase transcript_id : NM_008650.1

name	LOC100043300 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268709 GeneID:100043300
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479954.1

name	EG668200 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401980 GeneID:668200 MGI:3647149
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999990.1

name	LOC627695 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268845 GeneID:627695
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481049.1

name	LOC634967 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268849 GeneID:634967
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481050.1

name	Pgk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13654249 CCDS:CCDS28782.1 GeneID:18663 MGI:97563
definition	GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004618 - phosphoglycerate kinase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006096 - glycolysis [Evidence ISS] [Evidence IEA]; GO:0016310 - phosphorylation [Evidence ISS] codon_start : 1 exception : mismatches in translation product : phosphoglycerate kinase 2 protein_id : NP_112467.1

name	Crisp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753004 CCDS:CCDS28783.1 GeneID:11572 MGI:102552
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] codon_start : 1 note : acidic epididymal glycoprotein 2 product : cysteine-rich secretory protein 3 protein_id : NP_033769.1

name	Crisp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981914 CCDS:CCDS28784.1 GeneID:11571 MGI:102553
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] [Evidence IEA] codon_start : 1 exception : mismatches in translation note : acidic epididymal glycoprotein 1 product : cysteine-rich secretory protein 1 protein_id : NP_033768.2

name	EG433107 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770274 GeneID:433107 MGI:3643294
definition	codon_start : 1 product : similar to exocrine gland-secreting peptide 1 protein_id : XP_488818.1

name	EG619517 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370326 CCDS:CCDS28785.1 GeneID:619517 MGI:3645915
definition	codon_start : 1 product : exocrine gland-secreting peptide 1 protein_id : NP_001033589.1

name	Crisp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678423 CCDS:CCDS28786.1 GeneID:22024 MGI:98815
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] codon_start : 1 note : testis specific gene 1 product : cysteine-rich secretory protein 2 protein_id : NP_033446.1

name	Rhag (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755322 CCDS:CCDS28787.1 GeneID:19743 MGI:1202713
definition	codon_start : 1 product : Rhesus blood group-associated A glycoprotein protein_id : NP_035399.1

name	9130008F23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037251 GeneID:71583 MGI:1918833
definition	codon_start : 1 product : hypothetical protein LOC71583 protein_id : NP_082110.1

name	EG435528 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268712 GeneID:435528 MGI:3647683
definition	codon_start : 1 product : similar to OTTHUMP00000016587 protein_id : XP_487484.3

name	Cenpq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13994186 CCDS:CCDS28789.1 GeneID:83815 MGI:1933744
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : centromere protein Q protein_id : NP_114069.1

name	Mut (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678970 GeneID:17850 MGI:97239
definition	EC_number : 5.4.99.2 GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0031419 - cobalamin binding [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IDA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0009791 - post-embryonic development [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy product : methylmalonyl-Coenzyme A mutase protein_id : NP_032676.1

name	LOC668229 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668229
definition	number : 1 pseudo : _no_value

name	LOC668229 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668229
definition	number : 2 pseudo : _no_value

name	LOC668229 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668229
definition	number : 3 pseudo : _no_value

name	LOC100043756 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043756
definition	number : 1 pseudo : _no_value

name	LOC627577 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627577
definition	number : 1 pseudo : _no_value

name	Ldha-ps3 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : Ldh-1ps3; Ldh1-ps3 note : M14 pseudo : _no_value

name	Ldha-ps3 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : Ldh-1ps3; Ldh1-ps3 note : insertion sequence (242 nucleotides) pseudo : _no_value

name	Ldha-ps3 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : Ldh-1ps3; Ldh1-ps3 note : polyA signal pseudo : _no_value

name	Ldha-ps3 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	gene_synonym : Ldh-1ps3; Ldh1-ps3 note : polyA tail pseudo : _no_value

name	(CDS detail)
type	misc_feature
link
xref
definition	note : direct repeat 1

name	LOC672857 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268710 GeneID:672857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to Ac1147 pseudo : _no_value transcript_id : XR_034450.1

clone name	MSMg01-459C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-097O19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319N15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-540O10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-207E13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-415A16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-313I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085M01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-175P22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-180D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-185P05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-315A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376G07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-066F04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-127O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-143I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-188B17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-404C20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-174K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-119A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439B22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-055B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-311B04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-530H07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-498C14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-085L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-182M12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-138C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-118P14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053O11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-369O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356A06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478D04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-518B17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-268G20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-362H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-293G24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-272B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474D08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-419G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-543J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326F08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-040D24.b	B6Ng01-040D24.g
ACC	DH867276	DH867277
length	1,242	1,137
definition	DH867276\|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D24, 5' end.	DH867277\|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D24, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggcccatacctaaacataataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa atcagggacttgacaaggctgctcactttcgccctaccttttcaacatag tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaggaagtcaaattatcactttttgctgatgatat gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc tgataaacagcttcagtgaagtagctggatataaaattaactcaaacaag tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag ggaaacaacatccttttcaatagtcacaaataatataaaatatctcggcg tgactctaactaaggaagtgaaagaactgtatgataaaaacttcaagtct ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag caatctacagattcaatgcaatccccatcaaaattccaacacaattcttc aacgaattagaatgagcaatttgcaaattcatctggtataacaaaaaacc taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca tgttactggtatagagacagacaagtagaccaatggaatagaattgaaga cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag ctaaaaccatccagtggaagaaggacagcatttcaacaattggtgctggc acaactggttgttatcgtgtagaagatgcaaatcgatccatacttatctc ttgtactatgtcaaatctaagtggatcaggacttcacataaaaccagaga cactgaaacttatagagagaagtgggaaaagccttgagaatgggcacagg gaatatcctgaacaaacagcatgctgtgctgtagatcggattgacaattg gactatgaaccaaagttctgccaaggcaagatcgtcatagacaagaactc acgatggaagatctttccctctctatcaaatgggggataata	gaattcttgcatagggtaaaggacttgctttttataattgttttgtttgg tactttgaatcctatggggcattcttctgaaatgtaccgtgtccacttgc tgcttctgagtacaacatttgctcaggacactcaacattttagaaaggtt taacttgtgttgattagtcatgttttcaaacagtgtttgatcttgattgg aggcaggaagtgtactctctaaggactctatgaagtttcgttcacattgg cagtcagtcaggtcaaccacagtcttgaagtttttcttgttatcagcaga tatggtgggatctgcttgagtctgtttcagaaaatgagagacagtttata tatatatatatatatatctgtatatctggtatatatatatatacatatat atatatatatatatatatatgtatatctgtactcttcgattactaattca cagatttggacaacattcactaggaattctcaacatccagttttcaaata ttaacataacaatctttcagactagttggtgagagtaaattgatccagtg aagtgacaatttttcaatttgttcaggtaactggtagaaatgcaaaggct gagttattaccactggttcaaatattgtgataagtgcatgtggggatcaa gctcagaggacacaatacttgtggattgcctggataagatctaaggctaa attttacagcagtatggtggcttatgtgtaaaagcaatacatcaagcaca tgtaaccagtcacagtatccttatgtattttctctggcatttaaaggtta gtaattcactcctccatgaccaaggattttttctagccatgctatatgac aattgtgtactgtgtgctctatctctatgcctatcttctgtttctgttcc caggaacagggaacattttctgtatgtttgaacaaatagacctaagatgc ttaccaattcctggtagaagatgcacatgccagacatgtatagttgacta tacattttatctaaaccaaggtagtatacacatacaatcttccatacatt aaactcaaacaagataccataatttatttcaagtcaaatgatctttctga aacaaagagcaaaatatctactatatgccatctcttt
quality values	Open. Hide. 61 47 32 32 61 38 31 47 61 61 61 61 43 36 61 61 61 61 61 61 61 61 59 49 61 61 38 38 33 27 28 31 22 28 26 39 45 59 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 44 44 44 55 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 59 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 47 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 42 53 61 52 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 57 53 47 50 53 57 57 53 57 53 57 57 57 57 57 57 53 57 57 52 57 53 47 57 57 57 53 53 46 53 47 42 42 47 52 57 57 53 57 57 47 47 57 53 42 30 53 57 53 57 53 57 53 57 57 53 57 53 53 57 53 53 57 52 47 53 47 50 57 52 38 57 57 45 53 52 52 53 57 57 57 53 47 47 50 53 57 50 42 57 53 53 57 57 38 53 50 45 57 53 42 51 57 57 52 47 34 41 46 53 29 57 40 42 52 53 46 37 57 57 57 53 52 53 53 52 57 50 52 38 30 47 50 57 33 32 34 41 57 57 38 57 47 34 38 46 44 52 46 43 36 57 52 41 30 37 40 40 38 21 29 52 53 39 41 39 53 42 29 52 41 36 57 47 37 42 39 57 42 35 41 42 40 53 29 35 53 24 38 29 35 46 46 53 33 53 32 34 25 57 57 57 45 35 40 47 36 29 41 53 37 57 37 41 37 53 48 37 33 48 34 30 46 46 29 34 30 45 40 30 12 44 32 35 29 24 30 19 44 28 32 28 46 47 38 30 30 27 27 46 26 21 46 34 30 39 23 31 12 45 29 14 24 43 46 25 29 29 27 31 32 37 37 17 41 27 41 24 30 30 29 28 29 26 36 34 29 21 29 29 29 29 23 29 29 21 29 29 22 32 20 12 23 29 51 39 30 22 28 35 27 36 33 20 18 30 18 29 19 29 18 28 35 31 31 13 24 21 28 25 13 20 24 17 30 28 29 18 21 33 36 28 27 22 29 27 25 23 28 27 31 28 28 27 30 28 35 27 26 29 25 17 24 28 26 30 19 25 24 14 20 23 28 34 19 18 15 16 33 20 39 24 14 51 20 28 22 19 51 28 33 31 28 27 34 21 33 19 34 31 28 22 27 26 20 24 25 27 19 22 29 19 19 20 20 24 6 26 15 10 16 33 15 15 26 10 23 27 14 16 19 29 15 23 16 23 13 8 18 8 16 22 19 9 16 10 28 18 33 30 15 13 21 13 10 27 10 29 14 9 22 20 10 13 34 14 29 29 29 13 21 17 9 14 19 7 8 7 29 9 10 30 37 21 4 31 34 16 15 19 17 12 14 6 16 5 9 6 8 9 26 11 5 3 8 15 13 35 8 25 7 6 19 22 7 16 11 25 22 20 6 6 3 9 7 5 9 14 22 11 23 22 4 3 7 7 5 8 5 3 5 5 26 13 7 3 2 5 5 13 10 6 10 19 17 3 6 21 13 12 27 7 21 11 12 14 5 3 4 3 20 10 3 13 3 3 15 8 6 16 12 4 8 13 9 19 27 7 16 4 17 6 16 8 3 4 3 6 18 10 19 17 4 10 8 22 4 12 10 8 8 8 6 7 3 3 2 5 3 3 4 20 13 5 10 12 6 12 5 3 6 5 3 4 1 4 4 9 9 27 30 30 19 6 5 6 3 3 3 3	Open. Hide. 61 49 52 49 55 36 28 28 38 36 13 32 35 19 30 32 52 59 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 52 59 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 59 59 59 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 55 55 52 61 55 55 55 52 55 61 55 55 55 61 55 61 61 55 61 55 55 55 61 55 61 61 61 61 55 61 61 55 61 61 61 55 50 49 61 61 55 55 50 55 55 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 55 61 61 61 55 47 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 55 61 38 61 61 50 50 61 45 53 61 61 61 61 50 24 61 50 61 61 50 52 53 50 36 50 61 47 61 53 61 61 61 43 61 61 53 61 53 53 61 61 50 61 53 61 61 61 53 61 50 50 61 53 61 61 61 61 61 61 52 53 61 61 53 61 61 53 52 61 61 50 61 61 61 61 42 43 61 53 41 53 61 61 53 53 45 61 43 61 46 52 43 53 43 52 53 53 47 37 52 57 53 53 47 50 47 47 53 42 47 50 53 57 52 40 42 52 45 53 35 53 43 38 39 21 39 22 53 50 57 47 45 47 30 37 34 53 38 52 53 53 45 50 32 36 53 22 8 47 52 32 52 52 52 33 53 50 52 45 57 57 57 53 24 43 23 53 53 52 53 35 42 53 41 22 41 53 38 50 47 50 53 52 53 37 25 32 33 45 33 53 36 50 45 52 47 31 29 41 35 42 40 50 42 50 36 39 52 57 57 20 50 42 50 32 37 53 29 29 47 53 31 36 32 25 29 34 25 27 37 14 19 28 40 33 40 32 32 23 25 36 24 28 30 16 15 40 33 18 8 39 29 18 9 53 33 33 57 26 33 57 30 29 27 28 9 19 25 22 28 43 30 33 40 37 25 25 28 30 20 29 29 25 21 47 22 34 20 31 29 17 45 11 46 21 29 29 31 32 23 34 41 39 25 26 13 30 29 11 14 40 32 29 29 30 31 30 29 28 33 46 18 18 29 24 23 8 21 36 44 29 29 18 21 29 26 14 21 8 46 8 8 29 12 22 28 43 51 6 11 29 13 7 16 26 18 23 46 46 21 24 26 26 22 38 29 23 29 18 29 26 26 12 13 41 14 23 13 26 21 24 20 16 22 34 19 23 31 35 27 23 15 32 39 12 29 21 32 16 10 36 16 30 9 5 6 7 14 27 10 27 7 9 9 6 16 22 38 21 30 13 10 16 13 8 13 38 18 20 12 7 20 16 16 34 38 38 28 11 19 8 5 5 32 16 24 19 20 19 28 28 12 19 5 4 4 8 8 5 5 13 10 17 5 7 6 14 20 10 22 10 8 20 8 12 7 5 11 8 17 13 30 13 13 16 27 15 32 15 5 8 5 3 6 4 6 6 3 7 14 6 23 27 37 29 18 29 31 16 6 10 12 6 8 10 16 12 30 11 27 5 5 8 13 23 8 6 3 3 3 3 7 6 14 18 10 3 3 2 1 2 19 2 4 4 4 7 8 10 20 16 14 2 4 14 10 27 6 5 10 8 10 3 3 8 22 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_40666047_40667206
seq2: B6Ng01-040D24.g_68_1204 (reverse)

seq1  AAAGAAGATTGCATATAAGTAGATAATTATTACTACTTTTTGTCTCAGAA  50
      |||| |||| |||||| |||||||| ||     | || ||||| ||||||
seq2  AAAG-AGATGGCATAT-AGTAGATATTT-----TGCTCTTTGTTTCAGAA  43

seq1  AGCTCATTTTGTACTTTGAAATAAATTATGTGTATATTTTGTTTGAGTTT  100
      || ||||||   || |||||||||||||||    ||| ||||||||||||
seq2  AGATCATTT--GAC-TTGAAATAAATTATG---GTATCTTGTTTGAGTTT  87

seq1  AATTGTATGGGAAGAATTGTATGTGTATAACTACCTTGGTTTAGATAAAA  150
      || ||||| ||||| ||||||||||||| |||||||||||||||||||||
seq2  AA-TGTAT-GGAAG-ATTGTATGTGTAT-ACTACCTTGGTTTAGATAAAA  133

seq1  TGTTATAGTTCACTATTACATGTCTGGCATGTGCATTCTTTCTACCAGGA  200
      || ||||||  |||| ||||||||||||||||||||   |||||||||||
seq2  TG-TATAGTCAACTA-TACATGTCTGGCATGTGCAT--CTTCTACCAGGA  179

seq1  ATTGGTAAGCATCTTAGGTCTATTTGTTCAAACATACAG-AAATGTTCCC  249
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTGGTAAGCATCTTAGGTCTATTTGTTCAAACATACAGAAAATGTTCCC  229

seq1  TGTTCCTGGGAACAGAAAACAGAAGATAGGCATAGAGATAGAGCACACAG  299
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGGGAACAG-AAACAGAAGATAGGCATAGAGATAGAGCACACAG  278

seq1  TACACAATTGTCATATAGCATGGCTAGAAAAAAAATCCTTGGTCATGGAG  349
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TACACAATTGTCATATAGCATGGCTAG--AAAAAATCCTTGGTCATGGAG  326

seq1  GAGTGAATTACTAACCTTTAAATGCCAGAGAAAATACATAAGGATACTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATTACTAACCTTTAAATGCCAGAGAAAATACATAAGGATACTGT  376

seq1  GACTGGTTACATGTGCTTGATGTATTGCTTTTACACATAAGCCACCATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTTACATGTGCTTGATGTATTGCTTTTACACATAAGCCACCATAC  426

seq1  TGCTGTAAAATTTAGCCTTAGATCTTATCCAGGCAATCCACAAGTATTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAAAATTTAGCCTTAGATCTTATCCAGGCAATCCACAAGTATTGT  476

seq1  GTCCTCTGAGCTTGATCCCCACATGCACTTATCACAATATTTGAACCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGAGCTTGATCCCCACATGCACTTATCACAATATTTGAACCAGT  526

seq1  GGTAATAACTCAGCCTTTGCATTTCTACCAGTTACCTGAACAAATTGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATAACTCAGCCTTTGCATTTCTACCAGTTACCTGAACAAATTGAAA  576

seq1  AATTGTCACTTCACTGGATCAATTTACTCTCACCAACTAGTCTGAAAGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCACTTCACTGGATCAATTTACTCTCACCAACTAGTCTGAAAGAT  626

seq1  TGTTATGTTAATATTTGAAAACTGGATGTTGAGAATTCCTAGTGAATGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTTAATATTTGAAAACTGGATGTTGAGAATTCCTAGTGAATGTT  676

seq1  GTCCAAATCTGTGAATTAGTAATCGAAGAGTACAGATATACATATATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAATCTGTGAATTAGTAATCGAAGAGTACAGATATACATATATATA  726

seq1  TATATATATATATATATGTATATATATATATACCAGATATACAGATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATGTATATATATATATACCAGATATACAGATATAT  776

seq1  ATATATATATATATAAACTGTCTCTCATTTTCTGAAACAGACTCAAGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATAAACTGTCTCTCATTTTCTGAAACAGACTCAAGCAG  826

seq1  ATCCCACCATATCTGCTGATAACAAGAAAAACTTCAAGACTGTGGTTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCACCATATCTGCTGATAACAAGAAAAACTTCAAGACTGTGGTTGAC  876

seq1  CTGACTGACTGCCAATGTGAACGAAACTTCATAGAGTCCTTAGAGAGTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGACTGCCAATGTGAACGAAACTTCATAGAGTCCTTAGAGAGTAC  926

seq1  ACTTCCTGCCTCCAATCAAGATCAAACACTGTTTGAAAACATGACTAATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGCCTCCAATCAAGATCAAACACTGTTTGAAAACATGACTAATC  976

seq1  AACACAAGTTAAACCTTTCTAAAATGTTGAGTGTCCTGAGCAAATGTTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAGTTAAACCTTTCTAAAATGTTGAGTGTCCTGAGCAAATGTTGT  1026

seq1  ACTCAGAAGCAGCAAGTGGACACGGTACATTTCAGAAGAATGCCCCATAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAGCAGCAAGTGGACACGGTACATTTCAGAAGAATGCCCCATAG  1076

seq1  GATTCAAAGTACCAAACAAAACAATTATAAAAAGCAAGTCCTTTACCCTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGTACCAAACAAAACAATTATAAAAAGCAAGTCCTTTACCCTA  1126

seq1  TGCAAGAATTC  1160
      |||||||||||
seq2  TGCAAGAATTC  1137

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