BAC Information

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BAC

Clone NameB6Ng01-043D03
Chromosome17 (Build37)
Map Location 60,289,705 - 60,416,818
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043D03.bB6Ng01-043D03.g
ACCDH869332DH869333
length9991,167
definitionDH869332|Mus musculus domesticus DNA, BAC clone: B6Ng01-043D03, 5' end.DH869333|Mus musculus domesticus DNA, BAC clone: B6Ng01-043D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,415,789 - 60,416,818)(60,289,705 - 60,290,878)
sequence
gaattctcttcatgtagacatatgtgtactgggaagaaatcatttcctac
tatttaatctcaaacaagttcaacctattgatggttcattaagtcaggtt
caactgtagaagtttaaattgacattcagagttgaaaaaaaaagaaaata
caaatgttttatagcacatgagcagataaatcggcaaatacaataatgaa
atactttgaaaaattgaagtaatacataagtttataattgagtgaaataa
tgacttcaacgtaacttaataagtattccattaaaatgatccataatttt
ataagcagaagaaaaatatattgctatttatgacatttatcacatattat
tttaaaaagttgtttggccaatatttcataattgtttgaccagaatgttg
ttggctgtgcttacaaaataatttccagtgtgctcttgtgttgcttggtt
tattgtctcacagagtttcagcatgacttagaagtaattagctgctgatt
acacacatttctttgtaagttcacagagttcctaagaatatgtgtgcact
attgatttgatcatttctgcacctttgaaaacatttctttaataatatgg
tcaatcttgcccgacagtggtggctcatgcctttaatcacagcacttcgg
aggcagaggctggcggatttctgagtttgaggccagcctggtctacagtg
tgagttccagaacagccggggctatacagagaaaccctgtctaaagaaac
taaataataataatataatataatataatataataatatataattattat
tatattatatattatattatataatattatatgaaatcttaacattcaag
gatcactgttctctttacatgcactctatgtcaaagatgagtggattctt
ttttctcttctagtgtctattaaataagagaacaggttatcgtattgaat
catatgtggaacatatgcttgtttgaatgcattctcacagtcatatgaa
gaattcagcagacatgcagaatgaatatgaacattagcggcaccattata
tttaataacaaattgtggaaatacaattaagaaagcaattacaactaagt
actattaaaaacaaaatagcagtaaatgtatatagatttaatagatttgt
gcaggaaaggccttaaaataccatgatattataaagtgaacacaaaattg
atgaaaaaattctttagtcgtggagttaaagattaaatagtattaagtgg
tatacagaacacctacaactcttataaacaacaccaataaacttcttcat
gtagctagagaaaaatctgaaagtctatgtataatcacatacacacacaa
aatcaggctacacatactaatgtaaatagaacaggcacattacccagccc
aactaagaaacctatttagagatgcaccaatccatattcccccatctcac
tattccttcccaacacttctttaaggtgtcacgctggaacctatgctctt
acacattggagttgaagagagaaaatggggacatagctatagcaactcag
ttcccagtaattcattgcccagatttgataggatatgtttctgttcaaag
tttttttttttttcctgctttttctttttttccattttagatttctttga
cttactgtttggtgtactcgctcctgtcctgtgctgagcttctcacacat
cagttcctttgacctgcatgagcacataaggtctgccctgttctgttatt
gttttttctttactaatcaaaattcctaatatgcctccagcaagatagct
gggttcattgtagaatttcagctgttttttcctcagaggaaacagtgctt
cagtgcctacttttcaaggtctgaaaacaatgttttttctatatattatc
ttgttttactttttctttgctatgagcagtgaattcattaccagttgttc
tatcatattttaggtgaaaatctcttggaggaggaaccaggaaggggtgc
ccaagggaagaggatatgggaggatgatgggcatcaatctctacaggatt
aggcaatcatcttccactaaggcagacaagagttctcttgcaacacatgt
gtcagaggtcccgagcagtcatatatgctcctttggctggggacttatct
cttgaagctctggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60415789_60416818
seq2: B6Ng01-043D03.b_45_1043 (reverse)

seq1  TTCATATTGACTGTGAGAAATGCATGTCAAAACAGCATAATGTGTCCACC  50
      |||||| |||||||||| ||||||| |||||  ||||| |||| |||| |
seq2  TTCATA-TGACTGTGAG-AATGCAT-TCAAACAAGCAT-ATGT-TCCA-C  44

seq1  ATATGATTTCAATACGATAAAACTGTTTCTCTTATTTTAATAGACACTAG  100
      |||||| ||||||||||| || ||| |||||||| |||||||||||||||
seq2  ATATGA-TTCAATACGAT-AACCTG-TTCTCTTA-TTTAATAGACACTAG  90

seq1  AAGGAGAAAAAAGAATCCACTCATCTTTTTGACATAGAGTGGCATGTAAA  150
      || ||||||||||||||||||||||  ||||||||||||| |||||||||
seq2  AA-GAGAAAAAAGAATCCACTCATC--TTTGACATAGAGT-GCATGTAAA  136

seq1  GAGAACAGTGATTCCTTTGAAATGTTAAGATTTCATTATAATTATTATTA  200
      ||||||||||| |||||   ||||||||||||||| ||||| ||||| ||
seq2  GAGAACAGTGA-TCCTT--GAATGTTAAGATTTCA-TATAA-TATTA-TA  180

seq1  TAATTATAATAATAATAATAATAATAATAATTATTATTATTATTATTATT  250
      ||| |||||||   ||||| ||||||||||||||   |||||||| ||||
seq2  TAA-TATAATA--TATAAT-ATAATAATAATTAT--ATATTATTA-TATT  223

seq1  ATTATTATTATTATTATTATTATTATTTTAGTTTCTTTAGACAGGGTTTC  300
      | ||||| ||||| ||||||||||| ||||||||||||||||||||||||
seq2  A-TATTA-TATTA-TATTATTATTA-TTTAGTTTCTTTAGACAGGGTTTC  269

seq1  TCTGTATAGCCCCGGCTGTTCTGGAACTCACACTGTAGACCAGGCTGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATAGCCCCGGCTGTTCTGGAACTCACACTGTAGACCAGGCTGGCC  319

seq1  TCAAACTCAGAAATCCGCCAGCCTCTGCCTCCGAAGTGCTGTGATTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCAGAAATCCGCCAGCCTCTGCCTCCGAAGTGCTGTGATTAAAG  369

seq1  GCATGAGCCACCACTGTCGGGCAAGATTGACCATATTATTAAAGAAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGCCACCACTGTCGGGCAAGATTGACCATATTATTAAAGAAATGT  419

seq1  TTTCAAAGGTGCAGAAATGATCAAATCAATAGTGCACACATATTCTTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGGTGCAGAAATGATCAAATCAATAGTGCACACATATTCTTAGG  469

seq1  AACTCTGTGAACTTACAAAGAAATGTGTGTAATCAGCAGCTAATTACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTGAACTTACAAAGAAATGTGTGTAATCAGCAGCTAATTACTTC  519

seq1  TAAGTCATGCTGAAACTCTGTGAGACAATAAACCAAGCAACACAAGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATGCTGAAACTCTGTGAGACAATAAACCAAGCAACACAAGAGCA  569

seq1  CACTGGAAATTATTTTGTAAGCACAGCCAACAACATTCTGGTCAAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAATTATTTTGTAAGCACAGCCAACAACATTCTGGTCAAACAAT  619

seq1  TATGAAATATTGGCCAAACAACTTTTTAAAATAATATGTGATAAATGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATATTGGCCAAACAACTTTTTAAAATAATATGTGATAAATGTCA  669

seq1  TAAATAGCAATATATTTTTCTTCTGCTTATAAAATTATGGATCATTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGCAATATATTTTTCTTCTGCTTATAAAATTATGGATCATTTTAA  719

seq1  TGGAATACTTATTAAGTTACGTTGAAGTCATTATTTCACTCAATTATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATACTTATTAAGTTACGTTGAAGTCATTATTTCACTCAATTATAAA  769

seq1  CTTATGTATTACTTCAATTTTTCAAAGTATTTCATTATTGTATTTGCCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTATTACTTCAATTTTTCAAAGTATTTCATTATTGTATTTGCCGA  819

seq1  TTTATCTGCTCATGTGCTATAAAACATTTGTATTTTCTTTTTTTTTCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGCTCATGTGCTATAAAACATTTGTATTTTCTTTTTTTTTCAAC  869

seq1  TCTGAATGTCAATTTAAACTTCTACAGTTGAACCTGACTTAATGAACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGTCAATTTAAACTTCTACAGTTGAACCTGACTTAATGAACCAT  919

seq1  CAATAGGTTGAACTTGTTTGAGATTAAATAGTAGGAAATGATTTCTTCCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGTTGAACTTGTTTGAGATTAAATAGTAGGAAATGATTTCTTCCC  969

seq1  AGTACACATATGTCTACATGAAGAGAATTC  1030
      ||||||||||||||||||||||||||||||
seq2  AGTACACATATGTCTACATGAAGAGAATTC  999

seq1: chr17_60289705_60290878
seq2: B6Ng01-043D03.g_67_1233

seq1  GAATTCAGCAGACATGCAGAATGAATATGAACATTAGCGGCACCATTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGACATGCAGAATGAATATGAACATTAGCGGCACCATTATA  50

seq1  TTTAATAACAAATTGTGGAAATACAATTAAGAAAGCAATTACAACTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAACAAATTGTGGAAATACAATTAAGAAAGCAATTACAACTAAGT  100

seq1  ACTATTAAAAACAAAATAGCAGTAAATGTATATAGATTTAATAGATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAAAAACAAAATAGCAGTAAATGTATATAGATTTAATAGATTTGT  150

seq1  GCAGGAAAGGCCTTAAAATACCATGATATTATAAAGTGAACACAAAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAAGGCCTTAAAATACCATGATATTATAAAGTGAACACAAAATTG  200

seq1  ATGAAAAAATTCTTTAGTCGTGGAGTTAAAGATTAAATAGTATTAAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAATTCTTTAGTCGTGGAGTTAAAGATTAAATAGTATTAAGTGG  250

seq1  TATACAGAACACCTACAACTCTTATAAACAACACCAATAAACTTCTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAACACCTACAACTCTTATAAACAACACCAATAAACTTCTTCAT  300

seq1  GTAGCTAGAGAAAAATCTGAAAGTCTATGTATAATCACATACACACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAGAGAAAAATCTGAAAGTCTATGTATAATCACATACACACACAA  350

seq1  AATCAGGCTACACATACTAATGTAAATAGAACAGGCACATTACCCAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCTACACATACTAATGTAAATAGAACAGGCACATTACCCAGCCC  400

seq1  AACTAAGAAACCTATTTAGAGATGCACCAATCCATATTCCCCCATCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGAAACCTATTTAGAGATGCACCAATCCATATTCCCCCATCTCAC  450

seq1  TATTCCTTCCCAACACTTCTTTAAGGTGTCACGCTGGAACCTATGCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTCCCAACACTTCTTTAAGGTGTCACGCTGGAACCTATGCTCTT  500

seq1  ACACATTGGAGTTGAAGAGAGAAAATGGGGACATAGCTATAGCAACTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTGGAGTTGAAGAGAGAAAATGGGGACATAGCTATAGCAACTCAG  550

seq1  TTCCCAGTAATTCATTGCCCAGATTTGATAGGATATGTTTCTGTTCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTAATTCATTGCCCAGATTTGATAGGATATGTTTCTGTTCAAAG  600

seq1  TTTTTTTTTTTTTCCTGCTTTTTCTTTTTTTCCATTTTAGATTTCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTCCTGCTTTTTCTTTTTTTCCATTTTAGATTTCTTTGA  650

seq1  CTTACTGTTTGGTGTACTCGCTCCTGTCCTGTGCTGAGCTTCTCACACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTTTGGTGTACTCGCTCCTGTCCTGTGCTGAGCTTCTCACACAT  700

seq1  CAGTTCCTTTGACCTGCATGAGCACATAAGGTCTGCCCTGTTCTGTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTTTGACCTGCATGAGCACATAAGGTCTGCCCTGTTCTGTTATT  750

seq1  GTTTTTTCTTTACTAATCAAAATTCCTAATATGCCTCCAGCAAGATAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTTTACTAATCAAAATTCCTAATATGCCTCCAGCAAGATAGCT  800

seq1  GGGTTCATTGTAGAATTTCAGCTGTTTTTTCCTCAGAGGAAACAGTGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCATTGTAGAATTTCAGCTGTTTTTTCCTCAGAGGAAACAGTGCTT  850

seq1  CAGTGCCTACTTTTCAAGGTCTGAAAACAATGTTTTTTCTATATATTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTACTTTTCAAGGTCTGAAAACAATGTTTTTTCTATATATTATC  900

seq1  TTGTTTTACTTTTTCTTTGCTATGAGCAGTGAATTCATTACCAGTTGTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTACTTTTTCTTTGCTATGAGCAGTGAATTCATTACCAGTTGTTC  950

seq1  TATCATATTTTAGGTGAAAATCTCTTGGAGGAGGAACCAGGAAGGGGTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTTTAGGTGAAAATCTCTTGGAGGAGGAACCAGGAAGGGGTGC  1000

seq1  CCAAGGGAAGGAGGATATGGAAGGATGATGGGCATCAAATCTCTACAGGA  1050
      ||||||||| |||||||||| ||||||||||||||| |||||||||||||
seq2  CCAAGGGAA-GAGGATATGGGAGGATGATGGGCATC-AATCTCTACAGGA  1048

seq1  TTAGGCACATCATCTTCCACTAAGGCCAGACAAGGAAGTTCTC-TGCAAC  1099
      ||||||| ||||||||||||||||| ||||||||  ||||||| ||||||
seq2  TTAGGCA-ATCATCTTCCACTAAGG-CAGACAAG--AGTTCTCTTGCAAC  1094

seq1  ACATGTGTCAGAGGGCCACAGAGCAGTCCATATATGCT-CTTTGGCTGGT  1148
      |||||||||||||| |  | ||||||| |||||||||| |||||||||| 
seq2  ACATGTGTCAGAGGTC--CCGAGCAGT-CATATATGCTCCTTTGGCTGGG  1141

seq1  GACTTAATCTCTGAGAGCTCT-GAGGG  1174
      ||||| ||||||   |||||| |||||
seq2  GACTT-ATCTCTTGAAGCTCTGGAGGG  1167