BAC Information

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BAC

Clone NameB6Ng01-043P10
Chromosome17 (Build37)
Map Location 61,198,739 - 61,313,774
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043P10.bB6Ng01-043P10.g
ACCDH869864DH869865
length4731,158
definitionDH869864|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P10, 5' end.DH869865|Mus musculus domesticus DNA, BAC clone: B6Ng01-043P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,313,297 - 61,313,774)(61,198,739 - 61,199,896)
sequence
tcaatagctaatagaaaactaaagatggaagggaagtagctcctaagaat
aataaggaaagtcattttcaatttagagatatgaaagagaaaattataaa
gacaatgtcgagtaataacattttaaagtagcttaatattcactattcac
tgagagttacattatttcatttgggggaagtaattggatgacagacacta
ttaaggcaaaataagtcaaggaagatggagaagggaagggaaagtgtgac
ctatttctcataaggttggtaaaaataaagatatgaaataactttaaaga
tatttatatctcttaaaaatatttatatcttgtgtgtgtgtgtgtgtgag
tgtgtgtgtgtgtgtgtttgtgtgtgtttatgtggatgcagatgtttctg
gaggctgggagaatatattagccagggttttctaaaaccacagatctttt
ggaatgtctctctatatagaggc
gaattcagcttttaagatgaatagtcatacttgaattatataaaaatgca
atttaaaatatttacaagcttaatatatattagaaaagaggagagaataa
aaataatccaaggagaatgtggtagaatgaaagacataaggacaaatgat
aagaatgaaatgcagaaattaaatattagagttattaaatgaataatacc
aaaaattaaatattagagttattaaatgaataatacagttttatttttat
gtttattctgtaatatgtgtacattatgtcatgtgttttgatcgtatgag
ttcccaatatcttctcatgcgccttgcactcctgctgaacctcctgtcca
tcttagcaagtggctctaccatgcatgtgcatatttaatcaaaaagagaa
aacctacttgcaaagttgaagtttccaaagatattttaacaatactaaga
aaatgagagaacaataaagatgaatataaatatgagagagcactgtgaca
cctcagactcttgatttgctgagatcatttctttttttttcatttttttc
ccatttttattagatattttcttcatttacaattcaaatgttatcccagc
aaaacagaaggaaccaaatttcacatgaatgagaagctgctatgtatttt
aacgagcaaatggcctttcccaaaccaactataaattttatctttgtgaa
cactacgttctcatttttttacttttacatagtatataaaaatattttaa
tgtattaaaagacagtaggaattcttataaaacactgacacatttccctt
tcaagatttcatgcaaaacattcaagaaaatacaagaactcatcaataca
tatcaatactgaatatacagaagtacaacttagagaacaattaatgcaaa
aatattttattaatataataaattctgtcaagaatttaaagcattgttaa
gtgtgatctttccagctttgtctagctccttattgcctctaatacagaaa
ttttcatgtatcaaactttttgtctatctagtctgctggagaatgactga
agattgagagcacttgtcctcccacggaacttgttcattcgcagcaataa
caggtggaggtattagcttgtctgtcatgctccagcttcagagaaatctg
actcggcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61313297_61313774
seq2: B6Ng01-043P10.b_43_520 (reverse)

seq1  CCTCAATATAGAGAGACATTCCATAAGATCTGTGGTTTTAGAGAACCCTG  50
      |||| |||||||||||||||||| |||||||||||||||||| |||||||
seq2  CCTCTATATAGAGAGACATTCCAAAAGATCTGTGGTTTTAGAAAACCCTG  50

seq1  GCTAATATATTCTCCCAGCCTCCAGAAACATCTGCATCCACATAAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATATTCTCCCAGCCTCCAGAAACATCTGCATCCACATAAACACA  100

seq1  CACAAACACACACACACACACACTCACACACACACACACACAAGATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACACACACACACACACTCACACACACACACACACAAGATATAA  150

seq1  ATATTTTTAAGAGATATAAATATCTTTAAAGTTATTTCATATCTTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAGAGATATAAATATCTTTAAAGTTATTTCATATCTTTATTT  200

seq1  TTACCAACCTTATGAGAAATAGGTCACACTTTCCCTTCCCTTCTCCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAACCTTATGAGAAATAGGTCACACTTTCCCTTCCCTTCTCCATCT  250

seq1  TCCTTGACTTATTTTGCCTTAATAGTGTCTGTCATCCAATTACTTCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGACTTATTTTGCCTTAATAGTGTCTGTCATCCAATTACTTCCCCC  300

seq1  AAATGAAATAATGTAACTCTCAGTGAATAGTGAATATTAAGCTACTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAATAATGTAACTCTCAGTGAATAGTGAATATTAAGCTACTTTAA  350

seq1  AATGTTATTACTCGACATTGTCTTTATAATTTTCTCTTTCATATCTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTACTCGACATTGTCTTTATAATTTTCTCTTTCATATCTCTAA  400

seq1  ATTGAAAATGACTTTCCTTATTATTCTTAGGAGCTACTTCCCTTCCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATGACTTTCCTTATTATTCTTAGGAGCTACTTCCCTTCCATCT  450

seq1  TTAGTTTTCTATTAGCTATTGAGAATTC  478
      ||||||||||||||||||||||||||||
seq2  TTAGTTTTCTATTAGCTATTGAGAATTC  478

seq1: chr17_61198739_61199896
seq2: B6Ng01-043P10.g_69_1226

seq1  GAATTCAGCTTTTAAGATGAATAGTCATACTTGAATTATATAAAAATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTTTAAGATGAATAGTCATACTTGAATTATATAAAAATGCA  50

seq1  ATTTAAAATATTTACAAGCTTAATATATATTAGAAAAGAGGAGAGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATATTTACAAGCTTAATATATATTAGAAAAGAGGAGAGAATAA  100

seq1  AAATAATCCAAGGAGAATGTGGTAGAATGAAAGACATAAGGACAAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCAAGGAGAATGTGGTAGAATGAAAGACATAAGGACAAATGAT  150

seq1  AAGAATGAAATGCAGAAATTAAATATTAGAGTTATTAAATGAATAATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAATGCAGAAATTAAATATTAGAGTTATTAAATGAATAATACC  200

seq1  AAAAATTAAATATTAGAGTTATTAAATGAATAATACAGTTTTATTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAATATTAGAGTTATTAAATGAATAATACAGTTTTATTTTTAT  250

seq1  GTTTATTCTGTAATATGTGTACATTATGTCATGTGTTTTGATCGTATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTGTAATATGTGTACATTATGTCATGTGTTTTGATCGTATGAG  300

seq1  TTCCCAATATCTTCTCATGCGCCTTGCACTCCTGCTGAACCTCCTGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATATCTTCTCATGCGCCTTGCACTCCTGCTGAACCTCCTGTCCA  350

seq1  TCTTAGCAAGTGGCTCTACCATGCATGTGCATATTTAATCAAAAAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCAAGTGGCTCTACCATGCATGTGCATATTTAATCAAAAAGAGAA  400

seq1  AACCTACTTGCAAAGTTGAAGTTTCCAAAGATATTTTAACAATACTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTTGCAAAGTTGAAGTTTCCAAAGATATTTTAACAATACTAAGA  450

seq1  AAATGAGAGAACAATAAAGATGAATATAAATATGAGAGAGCACTGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAGAACAATAAAGATGAATATAAATATGAGAGAGCACTGTGACA  500

seq1  CCTCAGACTCTTGATTTGCTGAGATCATTTCTTTTTTTTTCATTTTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACTCTTGATTTGCTGAGATCATTTCTTTTTTTTTCATTTTTTTC  550

seq1  CCATTTTTATTAGATATTTTCTTCATTTACAATTCAAATGTTATCCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTATTAGATATTTTCTTCATTTACAATTCAAATGTTATCCCAGC  600

seq1  AAAACAGAAGGAACCAAATTTCACATGAATGAGAAGCTGCTATGTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAAGGAACCAAATTTCACATGAATGAGAAGCTGCTATGTATTTT  650

seq1  AACGAGCAAATGGCCTTTCCCAAACCAACTATAAATTTTATCTTTGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGCAAATGGCCTTTCCCAAACCAACTATAAATTTTATCTTTGTGAA  700

seq1  CACTACGTTCTCA-TTTTTTACTTTTACATAGTATATAAAAATATTTTAA  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACTACGTTCTCATTTTTTTACTTTTACATAGTATATAAAAATATTTTAA  750

seq1  TGTATTAAAAGACAGTAGGAATTCTTATAAAACACTGACACATTTCCCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAAAAGACAGTAGGAATTCTTATAAAACACTGACACATTTCCCTT  800

seq1  TCAAGATTTCATGCAAAACATTCAAGAAAATACAAGAACTCATCAATACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTTCATGCAAAACATTCAAGAAAATACAAGAACTCATCAATACA  850

seq1  TATCAATACTGAATATACAGAAGTACAACTTAGAGAACAATTAATGCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATACTGAATATACAGAAGTACAACTTAGAGAACAATTAATGCAAA  900

seq1  AATATTTTATTAATATAATAAATTCTGTCAAGAATTTAAAGCATTGTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATTAATATAATAAATTCTGTCAAGAATTTAAAGCATTGTTAA  950

seq1  GTGTGATCTTTCCAGCTTTGTCTAGCTCCTTATTGCCTCTAATACAGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATCTTTCCAGCTTTGTCTAGCTCCTTATTGCCTCTAATACAGAAA  1000

seq1  TTTTCATGTATCAAAC-TTTTGTCTATCTAGTCTGCTGGAGAAATGACTG  1048
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TTTTCATGTATCAAACTTTTTGTCTATCTAGTCTGCTGGAG-AATGACTG  1049

seq1  AAAGATTGAGAGCACTTGT-CTCCCACGGGAACTTGGTTCAATTCGCAGC  1097
       |||||||||||||||||| ||||||| ||||||| |||| |||||||||
seq2  -AAGATTGAGAGCACTTGTCCTCCCAC-GGAACTT-GTTC-ATTCGCAGC  1095

seq1  AATAACAGGT-GATGTA-TAGC-TGTCTGTCCATAGCTCCAGCTTCAGAG  1144
      |||||||||| || ||| |||| ||||||| ||| |||||||||||||||
seq2  AATAACAGGTGGAGGTATTAGCTTGTCTGT-CAT-GCTCCAGCTTCAGAG  1143

seq1  -AATCTGACTCGGCG  1158
       ||||||||||||||
seq2  AAATCTGACTCGGCG  1158